RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ERICH2A1L162 156 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 UBE2Q2LH0YL09 131 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 MPHOSPH10O00566 681 aaKnown RBP12.23□□□□□ -0.45
CCDC47-203ENST00000580986 CXCL11O14625 94 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
CCDC47-203ENST00000580986 RCAN1P53805 252 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 ANTXR2P58335 489 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 PRKG1Q13976 671 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 SEPT2Q15019 361 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 SEC23AQ15436 765 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 FAM47AQ5JRC9 791 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 RCSD1Q6JBY9 416 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 MOB2Q70IA6 237 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 CYB5R4Q7L1T6 521 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 SGMS1Q86VZ5 419 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 STK11IPQ8N1F8 1099 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 ZNF280CQ8ND82 737 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 IGDCC4Q8TDY8 1250 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 SLC10A4Q96EP9 437 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 KIAA1683Q9H0B3 1180 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 FZD1Q9UP38 647 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 KCNH4Q9UQ05 1017 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 TMX2Q9Y320 296 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 AFG3L2Q9Y4W6 797 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 CYP46A1Q9Y6A2 500 aa12.23□□□□□ -0.45
CCDC47-203ENST00000580986 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 C19orf81C9J6K1 198 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 PRC1O43663 620 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 USP14P54578 494 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 EVCP57679 992 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 GSE1Q14687 1217 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 RAB3GAP1Q15042 981 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 RABEP1Q15276 862 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 SH3D19Q5HYK7 790 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 RGMBQ6NW40 437 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 SIAH1Q8IUQ4 282 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 ENAHQ8N8S7 591 aaPredicted RBP12.22□□□□□ -0.45
CCDC47-203ENST00000580986 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 LPAR1Q92633 364 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 CCDC102AQ96A19 550 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 CLMNQ96JQ2 1002 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
CCDC47-203ENST00000580986 USP17L10C9JJH3 530 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 SH2B2O14492 632 aaPredicted RBP12.21□□□□□ -0.45
CCDC47-203ENST00000580986 IFIT3O14879 490 aaKnown RBP12.21□□□□□ -0.45
CCDC47-203ENST00000580986 SLC10A3P09131 477 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
CCDC47-203ENST00000580986 EEF2P13639 858 aaKnown RBP12.21□□□□□ -0.45
CCDC47-203ENST00000580986 BACE1P56817 501 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 C1QTNF8P60827 252 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 ANKRD1Q15327 319 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 SHROOM1Q2M3G4 852 aaPredicted RBP12.21□□□□□ -0.45
CCDC47-203ENST00000580986 RASAL3Q86YV0 1011 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 GMCL1P1Q8NEA9 526 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 OPTNQ96CV9 577 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 WNK4Q96J92 1243 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 MAP3K14Q99558 947 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 ELP3Q9H9T3 547 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 STX8Q9UNK0 236 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 ZHX2Q9Y6X8 837 aa12.21□□□□□ -0.45
CCDC47-203ENST00000580986 NID2Q14112 1375 aa12.2□□□□□ -0.46
CCDC47-203ENST00000580986 A0A0G2JLL6 359 aaPredicted RBP12.2□□□□□ -0.46
CCDC47-203ENST00000580986 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
CCDC47-203ENST00000580986 WTAPQ15007 396 aa12.2□□□□□ -0.46
CCDC47-203ENST00000580986 TMEM67Q5HYA8 995 aa12.2□□□□□ -0.46
CCDC47-203ENST00000580986 IFIT1BQ5T764 474 aaKnown RBP12.2□□□□□ -0.46
CCDC47-203ENST00000580986 SPRYD7Q5W111 196 aa12.2□□□□□ -0.46
CCDC47-203ENST00000580986 PRRT2Q7Z6L0 340 aaPredicted RBP12.2□□□□□ -0.46
CCDC47-203ENST00000580986 PROCA1Q8NCQ7 364 aaPredicted RBP12.2□□□□□ -0.46
CCDC47-203ENST00000580986 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
CCDC47-203ENST00000580986 LY9Q9HBG7 655 aa12.2□□□□□ -0.46
CCDC47-203ENST00000580986 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.2□□□□□ -0.46
CCDC47-203ENST00000580986 ABT1Q9ULW3 272 aaKnown RBP12.2□□□□□ -0.46
CCDC47-203ENST00000580986 A0A1W2PRG0 241 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 TESPA1A2RU30 521 aaPredicted RBP12.19□□□□□ -0.46
CCDC47-203ENST00000580986 FAM155AB1AL88 458 aaPredicted RBP12.19□□□□□ -0.46
CCDC47-203ENST00000580986 IRF6O14896 467 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 NMT2O60551 498 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 HSPA6P17066 643 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 ECE1P42892 770 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 ZNF157P51786 506 aaPredicted RBP12.19□□□□□ -0.46
CCDC47-203ENST00000580986 GTF2A2P52657 109 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 INHBEP58166 350 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 SPP2Q13103 211 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 NOGQ13253 232 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 SNAPC2Q13487 334 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 COL9A3Q14050 684 aaPredicted RBP12.19□□□□□ -0.46
CCDC47-203ENST00000580986 PPP2R5BQ15173 497 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 USP17L2Q6R6M4 530 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 ZNF467Q7Z7K2 595 aaPredicted RBP12.19□□□□□ -0.46
CCDC47-203ENST00000580986 GMCL1Q96IK5 515 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 TMEM47Q9BQJ4 181 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
CCDC47-203ENST00000580986 KAT14Q9H8E8 782 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 GOPCQ9HD26 462 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 ZCCHC17Q9NP64 241 aaKnown RBP12.19□□□□□ -0.46
CCDC47-203ENST00000580986 CLIP2Q9UDT6 1046 aa12.19□□□□□ -0.46
CCDC47-203ENST00000580986 MANSC4A6NHS7 340 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms