RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 CERS3Q8IU89 383 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 RGS22Q8NE09 1264 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 SDR42E1Q8WUS8 393 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 CRNKL1Q9BZJ0 848 aaKnown RBP20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 EFCC1Q9HA90 598 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 NID2Q14112 1375 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 PHF20L1A8MW92 1017 aa20.83■□□□□ 0.93
EIF4A1-216ENST00000580888 LDHCP07864 332 aa20.83■□□□□ 0.93
EIF4A1-216ENST00000580888 CAP1Q01518 475 aa20.83■□□□□ 0.93
EIF4A1-216ENST00000580888 GSE1Q14687 1217 aa20.83■□□□□ 0.93
EIF4A1-216ENST00000580888 LARP1BQ659C4 914 aaKnown RBP20.83■□□□□ 0.93
EIF4A1-216ENST00000580888 TMEM87AQ8NBN3 555 aa20.83■□□□□ 0.93
EIF4A1-216ENST00000580888 DCP1AQ9NPI6 582 aaPredicted RBP20.83■□□□□ 0.93
EIF4A1-216ENST00000580888 DDX4Q9NQI0 724 aaKnown RBP20.83■□□□□ 0.93
EIF4A1-216ENST00000580888 ZSWIM5Q9P217 1185 aa20.83■□□□□ 0.93
EIF4A1-216ENST00000580888 CENPFP49454 3210 aa20.83■□□□□ 0.92
EIF4A1-216ENST00000580888 ZSWIM8A7E2V4 1837 aa20.83■□□□□ 0.92
EIF4A1-216ENST00000580888 TLR2O60603 784 aa20.82■□□□□ 0.92
EIF4A1-216ENST00000580888 JAK2O60674 1132 aa20.82■□□□□ 0.92
EIF4A1-216ENST00000580888 CTR9Q6PD62 1173 aa20.82■□□□□ 0.92
EIF4A1-216ENST00000580888 ANKRD23Q86SG2 305 aa20.82■□□□□ 0.92
EIF4A1-216ENST00000580888 ATAD5Q96QE3 1844 aa20.82■□□□□ 0.92
EIF4A1-216ENST00000580888 DDTLA6NHG4 134 aaPredicted RBP20.81■□□□□ 0.92
EIF4A1-216ENST00000580888 NT5C2P49902 561 aa20.81■□□□□ 0.92
EIF4A1-216ENST00000580888 MOGSQ13724 837 aa20.81■□□□□ 0.92
EIF4A1-216ENST00000580888 ARHGEF6Q15052 776 aa20.81■□□□□ 0.92
EIF4A1-216ENST00000580888 KLHL40Q2TBA0 621 aa20.81■□□□□ 0.92
EIF4A1-216ENST00000580888 LY9Q9HBG7 655 aa20.81■□□□□ 0.92
EIF4A1-216ENST00000580888 INCENPQ9NQS7 918 aa20.81■□□□□ 0.92
EIF4A1-216ENST00000580888 AATFQ9NY61 560 aaKnown RBP eCLIP20.81■□□□□ 0.921e-323■■■■□ 25.1
EIF4A1-216ENST00000580888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.81■□□□□ 0.925e-7■■■□□ 15.3
EIF4A1-216ENST00000580888 ATP6V1DQ9Y5K8 247 aa20.81■□□□□ 0.92
EIF4A1-216ENST00000580888 KLF18A0A0U1RQI7 1052 aa20.8■□□□□ 0.92
EIF4A1-216ENST00000580888 CXCL11O14625 94 aa20.8■□□□□ 0.92
EIF4A1-216ENST00000580888 SCYL3Q8IZE3 742 aa20.8■□□□□ 0.92
EIF4A1-216ENST00000580888 ARMC5Q96C12 935 aa20.8■□□□□ 0.92
EIF4A1-216ENST00000580888 MGAMO43451 1857 aa20.79■□□□□ 0.92
EIF4A1-216ENST00000580888 SIPA1L1O43166 1804 aa20.79■□□□□ 0.92
EIF4A1-216ENST00000580888 ORC4O43929 436 aa20.79■□□□□ 0.92
EIF4A1-216ENST00000580888 TBC1D12O60347 775 aa20.79■□□□□ 0.92
EIF4A1-216ENST00000580888 KDM4AO75164 1064 aa20.79■□□□□ 0.92
EIF4A1-216ENST00000580888 RCAN1P53805 252 aa20.79■□□□□ 0.92
EIF4A1-216ENST00000580888 FOXD4L5Q5VV16 416 aaPredicted RBP20.79■□□□□ 0.92
EIF4A1-216ENST00000580888 FOXD4L4Q8WXT5 416 aaPredicted RBP20.79■□□□□ 0.92
EIF4A1-216ENST00000580888 ARPP21Q9UBL0 812 aaPredicted RBP20.79■□□□□ 0.92
EIF4A1-216ENST00000580888 ADGRA2Q96PE1 1338 aa20.78■□□□□ 0.92
EIF4A1-216ENST00000580888 PTPDC1A2A3K4 754 aa20.78■□□□□ 0.92
EIF4A1-216ENST00000580888 DHX16O60231 1041 aaKnown RBP20.78■□□□□ 0.92
EIF4A1-216ENST00000580888 BAG3O95817 575 aa20.78■□□□□ 0.92
EIF4A1-216ENST00000580888 CCT2P78371 535 aaKnown RBP20.78■□□□□ 0.92
EIF4A1-216ENST00000580888 C17orf99Q6UX52 265 aa20.78■□□□□ 0.92
EIF4A1-216ENST00000580888 ZSCAN29Q8IWY8 852 aaPredicted RBP20.78■□□□□ 0.92
EIF4A1-216ENST00000580888 CHAMP1Q96JM3 812 aa20.78■□□□□ 0.92
EIF4A1-216ENST00000580888 KIF3AQ9Y496 699 aa20.78■□□□□ 0.92
EIF4A1-216ENST00000580888 BAZ2AQ9UIF9 1905 aaKnown RBP20.77■□□□□ 0.92
EIF4A1-216ENST00000580888 USP17L12C9JPN9 530 aa20.77■□□□□ 0.92
EIF4A1-216ENST00000580888 USP17L21D6R901 530 aa20.77■□□□□ 0.92
EIF4A1-216ENST00000580888 CTNND1O60716 968 aaKnown RBP20.77■□□□□ 0.92
EIF4A1-216ENST00000580888 FDPSP14324 419 aaKnown RBP20.77■□□□□ 0.92
EIF4A1-216ENST00000580888 PICALMQ13492 652 aa20.77■□□□□ 0.92
EIF4A1-216ENST00000580888 APOA5Q6Q788 366 aa20.77■□□□□ 0.92
EIF4A1-216ENST00000580888 TMTC2Q8N394 836 aa20.77■□□□□ 0.92
EIF4A1-216ENST00000580888 NCOA5Q9HCD5 579 aaKnown RBP20.77■□□□□ 0.92
EIF4A1-216ENST00000580888 ROBO3Q96MS0 1386 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 GOLGA8BA8MQT2 603 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 MINDY4BA8MYZ0 360 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 PDHXO00330 501 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 DTNBO60941 627 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 PRPF40AO75400 957 aaKnown RBP20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 GNRH1P01148 92 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 PTPRAP18433 802 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 LACTBP83111 547 aaPredicted RBP20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 SEC23AQ15436 765 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 TMEM67Q5HYA8 995 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 ESR2Q92731 530 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 SENP2Q9HC62 589 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 PICK1Q9NRD5 415 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 AFG3L2Q9Y4W6 797 aa20.76■□□□□ 0.91
EIF4A1-216ENST00000580888 LOC285556D6RIA3 1793 aa20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 A0A0G2JLL6 359 aaPredicted RBP20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 SMIM22K7EJ46 135 aa20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 IFIT3O14879 490 aaKnown RBP20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 C12orf60Q5U649 245 aa20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 GPAT2Q6NUI2 795 aa20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 PRRT2Q7Z6L0 340 aaPredicted RBP20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 SH3RF3Q8TEJ3 882 aaPredicted RBP20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 OSBPL5Q9H0X9 879 aaPredicted RBP20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 FAM217BQ9NTX9 383 aaPredicted RBP20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 DDX60LQ5H9U9 1706 aaKnown RBP20.75■□□□□ 0.91
EIF4A1-216ENST00000580888 CYP2D7A0A087X1C5 515 aa20.74■□□□□ 0.91
EIF4A1-216ENST00000580888 VPS37CA5D8V6 355 aaPredicted RBP20.74■□□□□ 0.91
EIF4A1-216ENST00000580888 PLCG2P16885 1265 aa20.74■□□□□ 0.91
EIF4A1-216ENST00000580888 DEKP35659 375 aaKnown RBP20.74■□□□□ 0.91
EIF4A1-216ENST00000580888 RESTQ13127 1097 aa20.74■□□□□ 0.91
EIF4A1-216ENST00000580888 KIF22Q14807 665 aa20.74■□□□□ 0.91
EIF4A1-216ENST00000580888 NTRK3Q16288 839 aa20.74■□□□□ 0.91
EIF4A1-216ENST00000580888 ZHX2Q9Y6X8 837 aa20.74■□□□□ 0.91
EIF4A1-216ENST00000580888 BRCA2P51587 3418 aa20.74■□□□□ 0.91
EIF4A1-216ENST00000580888 SLURP2P0DP57 97 aa20.73■□□□□ 0.91
EIF4A1-216ENST00000580888 PRMT2P55345 433 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms