RNA–Protein interactions for RNA: ENST00000580278.5

CCDC144NL-AS1-213, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 1,819 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-213ENST00000580278 RASGRP2Q7LDG7 609 aa19.55■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 STAG2Q8N3U4 1231 aa19.55■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 TBC1D12O60347 775 aa19.54■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 SNHG28P0DPA3 235 aa19.54■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 PTMSP20962 102 aa19.54■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 EPS15P42566 896 aa19.54■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 JAG1P78504 1218 aa19.54■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 WASF1Q92558 559 aa19.54■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 SHISA4Q96DD7 197 aa19.54■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 TEPSINQ96N21 525 aa19.54■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 CNPY2Q9Y2B0 182 aa19.54■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 BAZ2BQ9UIF8 2168 aaKnown RBP19.54■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 RASA3Q14644 834 aa19.53■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 KRT40Q6A162 431 aa19.53■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 TRPM4Q8TD43 1214 aa19.53■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 TRIM34Q9BYJ4 488 aa19.53■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 TMEM179Q6ZVK1 233 aa19.53■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 SIAH1Q8IUQ4 282 aa19.53■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 GDPD2Q9HCC8 539 aa19.53■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 H7C1D1 291 aa19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 MPHOSPH10O00566 681 aaKnown RBP19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 TRAK2O60296 914 aa19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 PDHBP11177 359 aa19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 KIF23Q02241 960 aaPredicted RBP19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 TNFAIP1Q13829 316 aa19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 LRRC47Q8N1G4 583 aaKnown RBP19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 MKL1Q969V6 931 aa19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 NYAP2Q9P242 653 aa19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 CLIP2Q9UDT6 1046 aa19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 HACL1Q9UJ83 578 aa19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 V9GY48 417 aaPredicted RBP19.52■□□□□ 0.72
CCDC144NL-AS1-213ENST00000580278 CYTH3O43739 400 aa19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 PRPF40AO75400 957 aaKnown RBP19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 GDF11O95390 407 aa19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 TNNI2P48788 182 aa19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 GNAQP50148 359 aa19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 SEPT2Q15019 361 aa19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 ABCB5Q2M3G0 1257 aa19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 PPP4R3BQ5MIZ7 849 aa19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 KANSL2Q9H9L4 492 aa19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 KIF28PB7ZC32 967 aa19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 HIRAP54198 1017 aaPredicted RBP19.51■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 USP17L5A8MUK1 530 aa19.5■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 USP17L2Q6R6M4 530 aa19.5■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 USP48Q86UV5 1035 aa19.5■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 SPZ1Q9BXG8 430 aa19.5■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 hCG_1642624A0A1W2PR95 340 aa19.49■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 GH2P01242 217 aa19.49■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 MMP1P03956 469 aa19.49■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 PARP1P09874 1014 aaKnown RBP19.49■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 EEF2P13639 858 aaKnown RBP19.49■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 KRT85P78386 507 aa19.49■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 AKAP17AQ02040 695 aaKnown RBP19.49■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 LZTS2Q9BRK4 669 aa19.49■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 RBM27Q9P2N5 1060 aaKnown RBP19.49■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 KLRF2D3W0D1 207 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 FIBPO43427 364 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 GOLGA8HP0CJ92 632 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 VEGFAP15692 232 aaPredicted RBP19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 U2AF2P26368 475 aaKnown RBP eCLIP19.48■□□□□ 0.718e-7■□□□□ 10.1
CCDC144NL-AS1-213ENST00000580278 SMARCA1P28370 1054 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 PFKFB3Q16875 520 aaPredicted RBP19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 BRAPQ7Z569 592 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 MTMR7Q9Y216 660 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 ICA1Q05084 483 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 TRIM29Q14134 588 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 ASPRV1Q53RT3 343 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 MIGA2Q7L4E1 593 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 DEFB129Q9H1M3 183 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 KCNJ14Q9UNX9 436 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 ELP1O95163 1332 aa19.48■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 SCG2P13521 617 aa19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 NCLP19338 710 aaKnown RBP19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 ZNF543Q08ER8 600 aa19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 NPY5RQ15761 445 aa19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 KLHL40Q2TBA0 621 aa19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 SKOR2Q2VWA4 1001 aaPredicted RBP19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 PRAMEF18Q5VWM3 479 aa19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 DLK2Q6UY11 383 aa19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 GPT2Q8TD30 523 aa19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 PHF20Q9BVI0 1012 aa19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 VPS54Q9P1Q0 977 aa19.47■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 PHF20L1A8MW92 1017 aa19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 GADD45BO75293 160 aaPredicted RBP19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 ATL3Q6DD88 541 aa19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 CPVLQ9H3G5 476 aa19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 TFIP11Q9UBB9 837 aaKnown RBP19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 ZBTB21Q9ULJ3 1066 aa19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 SYNPO2Q9UMS6 1093 aa19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 CAP2P40123 477 aa19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 ANGEL2Q5VTE6 544 aaKnown RBP19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 MYSM1Q5VVJ2 828 aa19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 APOBEC3FQ8IUX4 373 aaKnown RBP19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 LEO1Q8WVC0 666 aaPredicted RBP19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 SCAND2PQ9GZW5 306 aaPredicted RBP19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 RIOX1Q9H6W3 641 aa19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 CABP5Q9NP86 173 aa19.46■□□□□ 0.71
CCDC144NL-AS1-213ENST00000580278 ATAD5Q96QE3 1844 aa19.45■□□□□ 0.7
CCDC144NL-AS1-213ENST00000580278 A0A1W2PRG0 241 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms