RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
IFT20-206ENST00000578122 CRHR2Q13324 411 aa18.2■□□□□ 0.5
IFT20-206ENST00000578122 C12orf42Q96LP6 360 aa18.2■□□□□ 0.5
IFT20-206ENST00000578122 R3HDMLQ9H3Y0 253 aa18.2■□□□□ 0.5
IFT20-206ENST00000578122 ZFYVE28Q9HCC9 887 aa18.2■□□□□ 0.5
IFT20-206ENST00000578122 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
IFT20-206ENST00000578122 NYAP2Q9P242 653 aa18.2■□□□□ 0.5
IFT20-206ENST00000578122 TMX2Q9Y320 296 aa18.2■□□□□ 0.5
IFT20-206ENST00000578122 NEDD4P46934 1319 aa18.2■□□□□ 0.5
IFT20-206ENST00000578122 CYP21A2P08686 494 aa18.19■□□□□ 0.5
IFT20-206ENST00000578122 PABPC4Q13310 644 aaKnown RBP eCLIP18.19■□□□□ 0.5
IFT20-206ENST00000578122 PPP4R3BQ5MIZ7 849 aa18.19■□□□□ 0.5
IFT20-206ENST00000578122 ESR2Q92731 530 aa18.19■□□□□ 0.5
IFT20-206ENST00000578122 CLIP2Q9UDT6 1046 aa18.19■□□□□ 0.5
IFT20-206ENST00000578122 CEP350Q5VT06 3117 aa18.19■□□□□ 0.5
IFT20-206ENST00000578122 CASP8AP2Q9UKL3 1982 aa18.19■□□□□ 0.5
IFT20-206ENST00000578122 TTLL1O95922 423 aa18.18■□□□□ 0.5
IFT20-206ENST00000578122 NT5C2P49902 561 aa18.18■□□□□ 0.5
IFT20-206ENST00000578122 LBX1P52954 281 aa18.18■□□□□ 0.5
IFT20-206ENST00000578122 PARK7Q99497 189 aaKnown RBP18.18■□□□□ 0.5
IFT20-206ENST00000578122 KRT23Q9C075 422 aa18.18■□□□□ 0.5
IFT20-206ENST00000578122 VCPKMTQ9H867 229 aa18.18■□□□□ 0.5
IFT20-206ENST00000578122 CNNM2Q9H8M5 875 aa18.18■□□□□ 0.5
IFT20-206ENST00000578122 IL17RBQ9NRM6 502 aa18.18■□□□□ 0.5
IFT20-206ENST00000578122 B4E1Z4 1266 aa18.17■□□□□ 0.5
IFT20-206ENST00000578122 KDM4AO75164 1064 aa18.17■□□□□ 0.5
IFT20-206ENST00000578122 OSBPP22059 807 aa18.17■□□□□ 0.5
IFT20-206ENST00000578122 NKX2-3Q8TAU0 364 aa18.17■□□□□ 0.5
IFT20-206ENST00000578122 MKL1Q969V6 931 aa18.17■□□□□ 0.5
IFT20-206ENST00000578122 TCP11L1Q9NUJ3 509 aa18.17■□□□□ 0.5
IFT20-206ENST00000578122 PNMA3Q9UL41 463 aa18.17■□□□□ 0.5
IFT20-206ENST00000578122 GPR25O00155 361 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 SLC27A2O14975 620 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 NMT2O60551 498 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 REC8O95072 547 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 CYP2C8P10632 490 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 VCAM1P19320 739 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 HOXA7P31268 230 aaPredicted RBP18.16■□□□□ 0.5
IFT20-206ENST00000578122 TRDNQ13061 729 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 NECTIN1Q15223 517 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 KIAA1755Q5JYT7 1200 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 CREB3L3Q68CJ9 461 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 LPAR1Q92633 364 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 ASCC2Q9H1I8 757 aaPredicted RBP18.16■□□□□ 0.5
IFT20-206ENST00000578122 GOPCQ9HD26 462 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 TAF6LQ9Y6J9 622 aa18.16■□□□□ 0.5
IFT20-206ENST00000578122 USP17L15C9J2P7 530 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 USP17L13C9JLJ4 530 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 USP17L11C9JVI0 530 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 USP17L18D6R9N7 530 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 USP17L22D6RA61 530 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 USP17L17D6RBQ6 530 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 USP17L19D6RCP7 530 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 USP17L20D6RJB6 530 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 E7EWF7 191 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 RAD21O60216 631 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 TLR2O60603 784 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 IRX3P78415 501 aaPredicted RBP18.15■□□□□ 0.5
IFT20-206ENST00000578122 USP17L24Q0WX57 530 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
IFT20-206ENST00000578122 SPICE1Q8N0Z3 855 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 LRRC47Q8N1G4 583 aaKnown RBP18.15■□□□□ 0.5
IFT20-206ENST00000578122 RPAP3Q9H6T3 665 aaPredicted RBP18.15■□□□□ 0.5
IFT20-206ENST00000578122 ZSWIM5Q9P217 1185 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 SYNPO2Q9UMS6 1093 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 STX8Q9UNK0 236 aa18.15■□□□□ 0.5
IFT20-206ENST00000578122 NOVP48745 357 aa18.14■□□□□ 0.49
IFT20-206ENST00000578122 RNF20Q5VTR2 975 aa18.14■□□□□ 0.49
IFT20-206ENST00000578122 CATSPERGQ6ZRH7 1159 aa18.14■□□□□ 0.49
IFT20-206ENST00000578122 STOX1Q6ZVD7 989 aa18.14■□□□□ 0.49
IFT20-206ENST00000578122 IQCA1Q86XH1 822 aa18.14■□□□□ 0.49
IFT20-206ENST00000578122 SMCR8Q8TEV9 937 aaPredicted RBP18.14■□□□□ 0.49
IFT20-206ENST00000578122 CPA4Q9UI42 421 aa18.14■□□□□ 0.49
IFT20-206ENST00000578122 ADGRA2Q96PE1 1338 aa18.14■□□□□ 0.49
IFT20-206ENST00000578122 F5H6K3 240 aa18.13■□□□□ 0.49
IFT20-206ENST00000578122 NDUFB10O96000 172 aa18.13■□□□□ 0.49
IFT20-206ENST00000578122 KLRC3Q07444 240 aa18.13■□□□□ 0.49
IFT20-206ENST00000578122 CCDC178Q5BJE1 867 aa18.13■□□□□ 0.49
IFT20-206ENST00000578122 RALYLQ86SE5 291 aaKnown RBP18.13■□□□□ 0.49
IFT20-206ENST00000578122 NCOA7Q8NI08 942 aa18.13■□□□□ 0.49
IFT20-206ENST00000578122 ZNF296Q8WUU4 475 aaPredicted RBP18.13■□□□□ 0.49
IFT20-206ENST00000578122 P2RX7Q99572 595 aaKnown RBP18.13■□□□□ 0.49
IFT20-206ENST00000578122 ZKSCAN3Q9BRR0 538 aa18.13■□□□□ 0.49
IFT20-206ENST00000578122 PRDM10Q9NQV6 1147 aa18.13■□□□□ 0.49
IFT20-206ENST00000578122 WDR46O15213 610 aaKnown RBP18.12■□□□□ 0.49
IFT20-206ENST00000578122 FKTNO75072 461 aa18.12■□□□□ 0.49
IFT20-206ENST00000578122 TOP1P11387 765 aaKnown RBP18.12■□□□□ 0.49
IFT20-206ENST00000578122 SLFN13Q68D06 897 aa18.12■□□□□ 0.49
IFT20-206ENST00000578122 C17orf99Q6UX52 265 aa18.12■□□□□ 0.49
IFT20-206ENST00000578122 GMCL1P1Q8NEA9 526 aa18.12■□□□□ 0.49
IFT20-206ENST00000578122 TTC14Q96N46 770 aa18.12■□□□□ 0.49
IFT20-206ENST00000578122 ZSCAN10Q96SZ4 725 aaPredicted RBP18.12■□□□□ 0.49
IFT20-206ENST00000578122 TANGO6Q9C0B7 1094 aa18.12■□□□□ 0.49
IFT20-206ENST00000578122 GCLCP48506 637 aaPredicted RBP18.11■□□□□ 0.49
IFT20-206ENST00000578122 SP3Q02447 781 aa18.11■□□□□ 0.49
IFT20-206ENST00000578122 FAM83BQ5T0W9 1011 aa18.11■□□□□ 0.49
IFT20-206ENST00000578122 RCSD1Q6JBY9 416 aa18.11■□□□□ 0.49
IFT20-206ENST00000578122 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
IFT20-206ENST00000578122 TMEM47Q9BQJ4 181 aa18.11■□□□□ 0.49
IFT20-206ENST00000578122 UBAC1Q9BSL1 405 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms