RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 N4BP1O75113 896 aaKnown RBP11.87□□□□□ -0.51
SEC22B-201ENST00000578049 ZNF131P52739 623 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 GPR108Q9NPR9 543 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 KRT15P19012 456 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 MORC3Q14149 939 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 LONRF2Q1L5Z9 754 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 C2CD5Q86YS7 1000 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 NUF2Q9BZD4 464 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 VCX3AQ9NNX9 186 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 RCOR1Q9UKL0 485 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 MAN1A1P33908 653 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 ADKP55263 362 aaKnown RBP11.86□□□□□ -0.51
SEC22B-201ENST00000578049 RRAGAQ7L523 313 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 ATP2A3Q93084 1043 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 SUCLG2Q96I99 432 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 PPP1R13BQ96KQ4 1090 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 AGTPBP1Q9UPW5 1226 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 OTUD7BQ6GQQ9 843 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 ZC3H12CQ9C0D7 883 aaKnown RBP11.86□□□□□ -0.51
SEC22B-201ENST00000578049 USP44Q9H0E7 712 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 ITIH3Q06033 890 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 PNOCQ13519 176 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 RPUSD2Q8IZ73 545 aaKnown RBP11.86□□□□□ -0.51
SEC22B-201ENST00000578049 REXO1Q8N1G1 1221 aaKnown RBP11.86□□□□□ -0.51
SEC22B-201ENST00000578049 MICAL1Q8TDZ2 1067 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 Q9H521 79 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 TPCN1Q9ULQ1 816 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 HSPA1LP34931 641 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 LONP1P36776 959 aaKnown RBP11.86□□□□□ -0.51
SEC22B-201ENST00000578049 BEND3Q5T5X7 828 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 GBP5Q96PP8 586 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 PLIN2Q99541 437 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 PYCARDQ9ULZ3 195 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 RRP15Q9Y3B9 282 aaKnown RBP11.86□□□□□ -0.51
SEC22B-201ENST00000578049 LAD1O00515 517 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 ITGA6P23229 1130 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 BIRC3Q13489 604 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 SLMAPQ14BN4 828 aa11.86□□□□□ -0.51
SEC22B-201ENST00000578049 ACTR5Q9H9F9 607 aaPredicted RBP11.86□□□□□ -0.51
SEC22B-201ENST00000578049 WDR7Q9Y4E6 1490 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 ARHGEF35A5YM69 484 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 CCNT1O60563 726 aaKnown RBP11.85□□□□□ -0.51
SEC22B-201ENST00000578049 HSPA6P17066 643 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 PHBP35232 272 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 SLC8A3P57103 927 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 MYOCDQ8IZQ8 938 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 FAM114A2Q9NRY5 505 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 KDRP35968 1356 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 H2AFZP0C0S5 128 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 TXKP42681 527 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 SNCBQ16143 134 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 H2AFVQ71UI9 128 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 CDCA7Q9BWT1 371 aaPredicted RBP11.85□□□□□ -0.51
SEC22B-201ENST00000578049 FANCLQ9NW38 375 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 SARM1Q6SZW1 724 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 TRMT44Q8IYL2 757 aaKnown RBP11.85□□□□□ -0.51
SEC22B-201ENST00000578049 CALCRLQ16602 461 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 TYW1BQ6NUM6 668 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 TEX11Q8IYF3 940 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 XRCC5P13010 732 aaKnown RBP11.85□□□□□ -0.51
SEC22B-201ENST00000578049 HAUS7Q99871 368 aa11.85□□□□□ -0.51
SEC22B-201ENST00000578049 LSG1Q9H089 658 aaKnown RBP11.85□□□□□ -0.51
SEC22B-201ENST00000578049 ARPP21Q9UBL0 812 aaPredicted RBP11.85□□□□□ -0.51
SEC22B-201ENST00000578049 SUN1O94901 812 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 HSP90AA5PQ58FG0 334 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 CNOT10Q9H9A5 744 aaKnown RBP11.84□□□□□ -0.51
SEC22B-201ENST00000578049 VEZTQ9HBM0 779 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 PPANQ9NQ55 473 aaKnown RBP11.84□□□□□ -0.51
SEC22B-201ENST00000578049 ATP8A2Q9NTI2 1148 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 EIF4A1P60842 406 aaKnown RBP11.84□□□□□ -0.51
SEC22B-201ENST00000578049 TRIM31Q9BZY9 425 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 PDE11AQ9HCR9 933 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 RIC8AQ9NPQ8 531 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 PALD1Q9ULE6 856 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 MAPK8IP1Q9UQF2 711 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 KRIT1O00522 736 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 YWHAEP62258 255 aaKnown RBP11.84□□□□□ -0.51
SEC22B-201ENST00000578049 CEP120Q8N960 986 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 COPRSQ9NQ92 184 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 ARMT1Q9H993 441 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 FAM207AQ9NSI2 230 aaPredicted RBP11.84□□□□□ -0.51
SEC22B-201ENST00000578049 PLEKHG3A1L390 1219 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 EXOC3O60645 756 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 KRT5P13647 590 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 HIBADHP31937 336 aaKnown RBP11.84□□□□□ -0.51
SEC22B-201ENST00000578049 GCKP35557 465 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 CHRNA2Q15822 529 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 RNF168Q8IYW5 571 aaPredicted RBP11.84□□□□□ -0.51
SEC22B-201ENST00000578049 AATKQ6ZMQ8 1374 aa11.84□□□□□ -0.51
SEC22B-201ENST00000578049 ALS2CLQ60I27 953 aa11.83□□□□□ -0.51
SEC22B-201ENST00000578049 ENOX1Q8TC92 643 aaKnown RBP11.83□□□□□ -0.51
SEC22B-201ENST00000578049 PHKBQ93100 1093 aa11.83□□□□□ -0.51
SEC22B-201ENST00000578049 FOXP1Q9H334 677 aaPredicted RBP11.83□□□□□ -0.51
SEC22B-201ENST00000578049 ODF2LQ9ULJ1 636 aa11.83□□□□□ -0.51
SEC22B-201ENST00000578049 CLASP1Q7Z460 1538 aa11.83□□□□□ -0.51
SEC22B-201ENST00000578049 CNGA1P29973 690 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 MUM1Q2TAK8 710 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 ARMCX3Q9UH62 379 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms