RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 NOVP48745 357 aa16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 ATP2B2Q01814 1243 aa16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 FAM47AQ5JRC9 791 aa16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 CATSPERGQ6ZRH7 1159 aa16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 SMCR8Q8TEV9 937 aaPredicted RBP16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 CEP95Q96GE4 821 aa16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 TTC14Q96N46 770 aa16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 NBPF3Q9H094 633 aa16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 ASCC2Q9H1I8 757 aaPredicted RBP16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 CLIP2Q9UDT6 1046 aa16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 TACC3Q9Y6A5 838 aa16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 ADGRA2Q96PE1 1338 aa16.42■□□□□ 0.22
SNORD3B-1-201ENST00000577988 WDR46O15213 610 aaKnown RBP16.41■□□□□ 0.22
SNORD3B-1-201ENST00000577988 CYP2C8P10632 490 aa16.41■□□□□ 0.22
SNORD3B-1-201ENST00000577988 VCAM1P19320 739 aa16.41■□□□□ 0.22
SNORD3B-1-201ENST00000577988 TRDNQ13061 729 aa16.41■□□□□ 0.22
SNORD3B-1-201ENST00000577988 ZYXQ15942 572 aaKnown RBP16.41■□□□□ 0.22
SNORD3B-1-201ENST00000577988 RRP12Q5JTH9 1297 aaKnown RBP16.41■□□□□ 0.22
SNORD3B-1-201ENST00000577988 TBC1D10CQ8IV04 446 aa16.41■□□□□ 0.22
SNORD3B-1-201ENST00000577988 LSG1Q9H089 658 aaKnown RBP16.41■□□□□ 0.22
SNORD3B-1-201ENST00000577988 INCENPQ9NQS7 918 aa16.41■□□□□ 0.22
SNORD3B-1-201ENST00000577988 HOXC10Q9NYD6 342 aa16.41■□□□□ 0.22
SNORD3B-1-201ENST00000577988 EPB41L2O43491 1005 aaKnown RBP16.4■□□□□ 0.22
SNORD3B-1-201ENST00000577988 BCRP11274 1271 aa16.4■□□□□ 0.22
SNORD3B-1-201ENST00000577988 KIF22Q14807 665 aa16.4■□□□□ 0.22
SNORD3B-1-201ENST00000577988 LBX2Q6XYB7 198 aa16.4■□□□□ 0.22
SNORD3B-1-201ENST00000577988 IQCA1Q86XH1 822 aa16.4■□□□□ 0.22
SNORD3B-1-201ENST00000577988 CLEC10AQ8IUN9 316 aa16.4■□□□□ 0.22
SNORD3B-1-201ENST00000577988 GMCL1P1Q8NEA9 526 aa16.4■□□□□ 0.22
SNORD3B-1-201ENST00000577988 ANO2Q9NQ90 1003 aa16.4■□□□□ 0.22
SNORD3B-1-201ENST00000577988 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
SNORD3B-1-201ENST00000577988 F5H6K3 240 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 GNRH1P01148 92 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 CYP21A2P08686 494 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 KLRC3Q07444 240 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 DGKZQ13574 1117 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 COG2Q14746 738 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 PKN2Q16513 984 aaKnown RBP16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 FAM110CQ1W6H9 321 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 RNF20Q5VTR2 975 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 P2RX7Q99572 595 aaKnown RBP16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 RPAP3Q9H6T3 665 aaPredicted RBP16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 IL17RBQ9NRM6 502 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 CPA4Q9UI42 421 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 MYPNQ86TC9 1320 aa16.39■□□□□ 0.21
SNORD3B-1-201ENST00000577988 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
SNORD3B-1-201ENST00000577988 REC8O95072 547 aa16.38■□□□□ 0.21
SNORD3B-1-201ENST00000577988 HERVK_113P62684 666 aa16.38■□□□□ 0.21
SNORD3B-1-201ENST00000577988 NECTIN1Q15223 517 aa16.38■□□□□ 0.21
SNORD3B-1-201ENST00000577988 CTU1Q7Z7A3 348 aaKnown RBP16.38■□□□□ 0.21
SNORD3B-1-201ENST00000577988 DGKHQ86XP1 1220 aa16.38■□□□□ 0.21
SNORD3B-1-201ENST00000577988 MORF4L1Q9UBU8 362 aa16.38■□□□□ 0.21
SNORD3B-1-201ENST00000577988 STX8Q9UNK0 236 aa16.38■□□□□ 0.21
SNORD3B-1-201ENST00000577988 B4E1Z4 1266 aa16.37■□□□□ 0.21
SNORD3B-1-201ENST00000577988 KDM4AO75164 1064 aa16.37■□□□□ 0.21
SNORD3B-1-201ENST00000577988 TOP1P11387 765 aaKnown RBP16.37■□□□□ 0.21
SNORD3B-1-201ENST00000577988 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
SNORD3B-1-201ENST00000577988 MB21D1Q8N884 522 aa16.37■□□□□ 0.21
SNORD3B-1-201ENST00000577988 NCOA7Q8NI08 942 aa16.37■□□□□ 0.21
SNORD3B-1-201ENST00000577988 ANKS1AQ92625 1134 aa16.37■□□□□ 0.21
SNORD3B-1-201ENST00000577988 ZSWIM5Q9P217 1185 aa16.37■□□□□ 0.21
SNORD3B-1-201ENST00000577988 RABGAP1Q9Y3P9 1069 aa16.37■□□□□ 0.21
SNORD3B-1-201ENST00000577988 NEDD4P46934 1319 aa16.37■□□□□ 0.21
SNORD3B-1-201ENST00000577988 NDUFB10O96000 172 aa16.36■□□□□ 0.21
SNORD3B-1-201ENST00000577988 HOXD10P28358 340 aa16.36■□□□□ 0.21
SNORD3B-1-201ENST00000577988 DSG3P32926 999 aa16.36■□□□□ 0.21
SNORD3B-1-201ENST00000577988 PRMT2P55345 433 aa16.36■□□□□ 0.21
SNORD3B-1-201ENST00000577988 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
SNORD3B-1-201ENST00000577988 COL13A1Q5TAT6 717 aaPredicted RBP16.36■□□□□ 0.21
SNORD3B-1-201ENST00000577988 SPICE1Q8N0Z3 855 aa16.36■□□□□ 0.21
SNORD3B-1-201ENST00000577988 MTA3Q9BTC8 594 aa16.36■□□□□ 0.21
SNORD3B-1-201ENST00000577988 TANGO6Q9C0B7 1094 aa16.36■□□□□ 0.21
SNORD3B-1-201ENST00000577988 E7EWF7 191 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 NMT2O60551 498 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 TSGA10IPQ3SY00 556 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 CREB3L3Q68CJ9 461 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 SLFN13Q68D06 897 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 RCSD1Q6JBY9 416 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 RALYLQ86SE5 291 aaKnown RBP16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 GPRC5AQ8NFJ5 357 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 CD99L2Q8TCZ2 262 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 GMCL1Q96IK5 515 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 UBAC1Q9BSL1 405 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 EFCC1Q9HA90 598 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 RBPJLQ9UBG7 517 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 FEM1BQ9UK73 627 aa16.35■□□□□ 0.21
SNORD3B-1-201ENST00000577988 SPDYE16A6NNV3 312 aaPredicted RBP16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 SLC27A2O14975 620 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 RAD21O60216 631 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 PLA2G6O60733 806 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 FLOT1O75955 427 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 FDX1P10109 184 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 BMP3P12645 472 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 ZKSCAN1P17029 563 aaPredicted RBP16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 FCGRTP55899 365 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 CCNA1P78396 465 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 LRRC47Q8N1G4 583 aaKnown RBP16.34■□□□□ 0.21
SNORD3B-1-201ENST00000577988 CHURC1Q8WUH1 139 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms