RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 EYA2O00167 538 aa6.97□□□□□ -1.29
SF3B3-210ENST00000567654 IRS4O14654 1257 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-210ENST00000567654 EFSO43281 561 aa6.97□□□□□ -1.29
SF3B3-210ENST00000567654 CHGBP05060 677 aa6.97□□□□□ -1.29
SF3B3-210ENST00000567654 IFIT2P09913 472 aaKnown RBP6.97□□□□□ -1.29
SF3B3-210ENST00000567654 FAM157BP0CG42 384 aa6.97□□□□□ -1.29
SF3B3-210ENST00000567654 HCLS1P14317 486 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-210ENST00000567654 BRD2P25440 801 aaKnown RBP6.97□□□□□ -1.29
SF3B3-210ENST00000567654 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-210ENST00000567654 CTSWP56202 376 aa6.97□□□□□ -1.29
SF3B3-210ENST00000567654 SAMD5Q5TGI4 173 aa6.97□□□□□ -1.29
SF3B3-210ENST00000567654 USP26Q9BXU7 913 aa6.97□□□□□ -1.29
SF3B3-210ENST00000567654 UPF2Q9HAU5 1272 aaKnown RBP6.97□□□□□ -1.29
SF3B3-210ENST00000567654 ECHDC1Q9NTX5 307 aa6.97□□□□□ -1.29
SF3B3-210ENST00000567654 STIM2Q9P246 746 aa6.97□□□□□ -1.29
SF3B3-210ENST00000567654 TRMT112Q9UI30 125 aaKnown RBP6.97□□□□□ -1.29
SF3B3-210ENST00000567654 CCNL1Q9UK58 526 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-210ENST00000567654 ATXN7L1Q9ULK2 861 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-210ENST00000567654 GPC6Q9Y625 555 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-210ENST00000567654 IVNS1ABPQ9Y6Y0 642 aa6.97□□□□□ -1.29
SF3B3-210ENST00000567654 CDK5RAP2Q96SN8 1893 aa6.96□□□□□ -1.29
SF3B3-210ENST00000567654 LRRC37AA6NMS7 1700 aa6.96□□□□□ -1.29
SF3B3-210ENST00000567654 TCHHQ07283 1943 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 H3BRB1 525 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 OPLAHO14841 1288 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 ERC2O15083 957 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 PDE8AO60658 829 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 GLRX3O76003 335 aaKnown RBP6.96□□□□□ -1.3
SF3B3-210ENST00000567654 MX2P20592 715 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 ADORA1P30542 326 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 TIMM10P62072 90 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 USPL1Q5W0Q7 1092 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 TBC1D9BQ66K14 1250 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 KRT27Q7Z3Y8 459 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 RGL4Q8IZJ4 473 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 BOLA2Q9H3K6 86 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 TUT1Q9H6E5 874 aaKnown RBP6.96□□□□□ -1.3
SF3B3-210ENST00000567654 PALD1Q9ULE6 856 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 NIP7Q9Y221 180 aaKnown RBP eCLIP6.96□□□□□ -1.3
SF3B3-210ENST00000567654 KIAA1551Q9HCM1 1747 aa6.96□□□□□ -1.3
SF3B3-210ENST00000567654 RPS6KA4O75676 772 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 CIAO1O76071 339 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 TRIM37O94972 964 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 INPP5BP32019 993 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 IL15P40933 162 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-210ENST00000567654 SLC30A3Q99726 388 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 CFHR5Q9BXR6 569 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 SEC31BQ9NQW1 1179 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 MARK1Q9P0L2 795 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 RGS17Q9UGC6 210 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-210ENST00000567654 NARFQ9UHQ1 456 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 PHF24Q9UPV7 400 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 BAZ2AQ9UIF9 1905 aaKnown RBP6.95□□□□□ -1.3
SF3B3-210ENST00000567654 LTBP1Q14766 1721 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 SH3TC1Q8TE82 1336 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 MAST2Q6P0Q8 1798 aa6.95□□□□□ -1.3
SF3B3-210ENST00000567654 ECM29Q5VYK3 1845 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 A0A1B0GUL7 405 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 SGSM2O43147 1006 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 ZAP70P43403 619 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 IFIT5Q13325 482 aaKnown RBP6.94□□□□□ -1.3
SF3B3-210ENST00000567654 HIF1AQ16665 826 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 CCDC57Q2TAC2 916 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 IER5Q5VY09 327 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 FAM196AQ6ZSG2 479 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 SLC51AQ86UW1 340 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 CNTROBQ8N137 903 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 CMTR1Q8N1G2 835 aaKnown RBP6.94□□□□□ -1.3
SF3B3-210ENST00000567654 VGLL2Q8N8G2 317 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 GPR152Q8TDT2 470 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 FAM227BQ96M60 508 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 UTP14AQ9BVJ6 771 aaKnown RBP6.94□□□□□ -1.3
SF3B3-210ENST00000567654 KCNH4Q9UQ05 1017 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 MTMR7Q9Y216 660 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 RIPOR2Q9Y4F9 1068 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 ZNF646O15015 1829 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-210ENST00000567654 MED23Q9ULK4 1368 aa6.94□□□□□ -1.3
SF3B3-210ENST00000567654 A0A0D9SFI3 127 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 ANKRD18BA2A2Z9 1011 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 SNAP23O00161 211 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 ICMTO60725 284 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 BMP4P12644 408 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 ATP5JP18859 108 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 EIF1AXP47813 144 aaKnown RBP6.93□□□□□ -1.3
SF3B3-210ENST00000567654 ARSDP51689 593 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 RBM6P78332 1123 aaKnown RBP6.93□□□□□ -1.3
SF3B3-210ENST00000567654 PTH1RQ03431 593 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 NMIQ13287 307 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-210ENST00000567654 PARP10Q53GL7 1025 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 CWC27Q6UX04 472 aaKnown RBP6.93□□□□□ -1.3
SF3B3-210ENST00000567654 KRT25Q7Z3Z0 450 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 WHAMMQ8TF30 809 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 EVI5LQ96CN4 794 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 GPATCH3Q96I76 525 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 NEUROD6Q96NK8 337 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 LSG1Q9H089 658 aaKnown RBP6.93□□□□□ -1.3
SF3B3-210ENST00000567654 GPR108Q9NPR9 543 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 RTCBQ9Y3I0 505 aaKnown RBP6.93□□□□□ -1.3
SF3B3-210ENST00000567654 MYH15Q9Y2K3 1946 aa6.93□□□□□ -1.3
SF3B3-210ENST00000567654 RTL9Q8NET4 1388 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms