RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SLC4A4Q9Y6R1 1079 aa22.35■■□□□ 1.17
LINC01238-205ENST00000567549 ZFYP08048 801 aaPredicted RBP22.34■■□□□ 1.17
LINC01238-205ENST00000567549 GUCY1A2P33402 732 aa22.34■■□□□ 1.17
LINC01238-205ENST00000567549 TRIM32Q13049 653 aa22.34■■□□□ 1.17
LINC01238-205ENST00000567549 GRB14Q14449 540 aa22.34■■□□□ 1.17
LINC01238-205ENST00000567549 C12orf60Q5U649 245 aa22.34■■□□□ 1.17
LINC01238-205ENST00000567549 DPP9Q86TI2 863 aa22.34■■□□□ 1.17
LINC01238-205ENST00000567549 KANSL2Q9H9L4 492 aa22.34■■□□□ 1.17
LINC01238-205ENST00000567549 ZNF287Q9HBT7 754 aa22.34■■□□□ 1.17
LINC01238-205ENST00000567549 GOPCQ9HD26 462 aa22.34■■□□□ 1.17
LINC01238-205ENST00000567549 TMX2Q9Y320 296 aa22.34■■□□□ 1.17
LINC01238-205ENST00000567549 WDR46O15213 610 aaKnown RBP22.33■■□□□ 1.17
LINC01238-205ENST00000567549 CNMDO75829 334 aa22.33■■□□□ 1.17
LINC01238-205ENST00000567549 C16orf86Q6ZW13 317 aa22.33■■□□□ 1.17
LINC01238-205ENST00000567549 DIS3LQ8TF46 1054 aaKnown RBP22.33■■□□□ 1.17
LINC01238-205ENST00000567549 MROH8Q9H579 483 aa22.33■■□□□ 1.17
LINC01238-205ENST00000567549 BAZ2AQ9UIF9 1905 aaKnown RBP22.33■■□□□ 1.16
LINC01238-205ENST00000567549 USP17L12C9JPN9 530 aa22.32■■□□□ 1.16
LINC01238-205ENST00000567549 USP17L21D6R901 530 aa22.32■■□□□ 1.16
LINC01238-205ENST00000567549 FLOT1O75955 427 aa22.32■■□□□ 1.16
LINC01238-205ENST00000567549 CDK8P49336 464 aa22.32■■□□□ 1.16
LINC01238-205ENST00000567549 GIMAP6Q6P9H5 292 aa22.32■■□□□ 1.16
LINC01238-205ENST00000567549 C7orf61Q8IZ16 206 aa22.32■■□□□ 1.16
LINC01238-205ENST00000567549 SPATC1LQ9H0A9 340 aa22.32■■□□□ 1.16
LINC01238-205ENST00000567549 VCPKMTQ9H867 229 aa22.32■■□□□ 1.16
LINC01238-205ENST00000567549 BTBD7Q9P203 1132 aa22.32■■□□□ 1.16
LINC01238-205ENST00000567549 PEX10O60683 326 aa22.31■■□□□ 1.16
LINC01238-205ENST00000567549 GNAT2P19087 354 aa22.31■■□□□ 1.16
LINC01238-205ENST00000567549 COPB2P35606 906 aa22.31■■□□□ 1.16
LINC01238-205ENST00000567549 ABRAQ8N0Z2 381 aa22.31■■□□□ 1.16
LINC01238-205ENST00000567549 ZNF236Q9UL36 1845 aa22.31■■□□□ 1.16
LINC01238-205ENST00000567549 ERC2O15083 957 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 PRKAB2O43741 272 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 SLC25A27O95847 323 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 CYP2D6P10635 497 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 DSG3P32926 999 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 PLS1Q14651 629 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 CCL14Q16627 93 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 OLFML2BQ68BL8 750 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 SLC44A5Q8NCS7 719 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 DYNLL2Q96FJ2 89 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 PRO3102Q9H379 93 aa22.3■■□□□ 1.16
LINC01238-205ENST00000567549 ZBTB47Q9UFB7 747 aaPredicted RBP22.3■■□□□ 1.16
LINC01238-205ENST00000567549 A0A1W2PRG0 241 aa22.29■■□□□ 1.16
LINC01238-205ENST00000567549 CNGA1P29973 690 aa22.29■■□□□ 1.16
LINC01238-205ENST00000567549 BMP8BP34820 402 aa22.29■■□□□ 1.16
LINC01238-205ENST00000567549 KBTBD3Q8NAB2 608 aa22.29■■□□□ 1.16
LINC01238-205ENST00000567549 MOV10L1Q9BXT6 1211 aaKnown RBP22.29■■□□□ 1.16
LINC01238-205ENST00000567549 DCTPP1Q9H773 170 aa22.29■■□□□ 1.16
LINC01238-205ENST00000567549 DDX20Q9UHI6 824 aaKnown RBP22.29■■□□□ 1.16
LINC01238-205ENST00000567549 AKR1B1P15121 316 aa22.28■■□□□ 1.16
LINC01238-205ENST00000567549 CCND3P30281 292 aaPredicted RBP22.28■■□□□ 1.16
LINC01238-205ENST00000567549 POTEEQ6S8J3 1075 aa22.28■■□□□ 1.16
LINC01238-205ENST00000567549 APPBP2Q92624 585 aa22.28■■□□□ 1.16
LINC01238-205ENST00000567549 MKNK2Q9HBH9 465 aa22.28■■□□□ 1.16
LINC01238-205ENST00000567549 ALPK3Q96L96 1907 aa22.27■■□□□ 1.16
LINC01238-205ENST00000567549 A0A0G2JMZ2 1700 aa22.27■■□□□ 1.16
LINC01238-205ENST00000567549 FCER1AP12319 257 aa22.27■■□□□ 1.16
LINC01238-205ENST00000567549 ERCC3P19447 782 aa22.27■■□□□ 1.16
LINC01238-205ENST00000567549 ADORA2AP29274 412 aa22.27■■□□□ 1.16
LINC01238-205ENST00000567549 SBK1Q52WX2 424 aa22.27■■□□□ 1.16
LINC01238-205ENST00000567549 CTR9Q6PD62 1173 aa22.27■■□□□ 1.16
LINC01238-205ENST00000567549 NCAPG2Q86XI2 1143 aa22.27■■□□□ 1.16
LINC01238-205ENST00000567549 ARRDC4Q8NCT1 418 aa22.27■■□□□ 1.16
LINC01238-205ENST00000567549 LHX8Q68G74 356 aa22.26■■□□□ 1.15
LINC01238-205ENST00000567549 SPICE1Q8N0Z3 855 aa22.26■■□□□ 1.15
LINC01238-205ENST00000567549 NACAP1Q9BZK3 213 aa22.26■■□□□ 1.15
LINC01238-205ENST00000567549 PUS7LQ9H0K6 701 aaKnown RBP22.26■■□□□ 1.15
LINC01238-205ENST00000567549 STAP2Q9UGK3 403 aa22.26■■□□□ 1.15
LINC01238-205ENST00000567549 TTC41PQ6P2S7 1318 aa22.26■■□□□ 1.15
LINC01238-205ENST00000567549 RNF113AO15541 343 aaKnown RBP22.25■■□□□ 1.15
LINC01238-205ENST00000567549 RAD21O60216 631 aa22.25■■□□□ 1.15
LINC01238-205ENST00000567549 SMARCA5O60264 1052 aaPredicted RBP22.25■■□□□ 1.15
LINC01238-205ENST00000567549 COL6A1P12109 1028 aa22.25■■□□□ 1.15
LINC01238-205ENST00000567549 EEF2P13639 858 aaKnown RBP22.25■■□□□ 1.15
LINC01238-205ENST00000567549 C20orf194Q5TEA3 1177 aa22.25■■□□□ 1.15
LINC01238-205ENST00000567549 STRBPQ96SI9 672 aaKnown RBP22.25■■□□□ 1.15
LINC01238-205ENST00000567549 GDF15Q99988 308 aa22.25■■□□□ 1.15
LINC01238-205ENST00000567549 FRMPD3Q5JV73 1810 aa22.24■■□□□ 1.15
LINC01238-205ENST00000567549 KBTBD13C9JR72 458 aa22.24■■□□□ 1.15
LINC01238-205ENST00000567549 DNM1LO00429 736 aa22.24■■□□□ 1.15
LINC01238-205ENST00000567549 SLC3A2P08195 630 aaKnown RBP22.24■■□□□ 1.15
LINC01238-205ENST00000567549 TDO2P48775 406 aa22.24■■□□□ 1.15
LINC01238-205ENST00000567549 MNX1P50219 401 aaPredicted RBP22.24■■□□□ 1.15
LINC01238-205ENST00000567549 KCTD2Q14681 263 aa22.24■■□□□ 1.15
LINC01238-205ENST00000567549 ATG4CQ96DT6 458 aa22.24■■□□□ 1.15
LINC01238-205ENST00000567549 PRKAG2Q9UGJ0 569 aa22.24■■□□□ 1.15
LINC01238-205ENST00000567549 NRBP1Q9UHY1 535 aa22.24■■□□□ 1.15
LINC01238-205ENST00000567549 ZMYND8Q9ULU4 1186 aaPredicted RBP22.24■■□□□ 1.15
LINC01238-205ENST00000567549 CTDP1Q9Y5B0 961 aaPredicted RBP22.24■■□□□ 1.15
LINC01238-205ENST00000567549 PFASO15067 1338 aa22.24■■□□□ 1.15
LINC01238-205ENST00000567549 APPP05067 770 aa22.23■■□□□ 1.15
LINC01238-205ENST00000567549 PPP4R3BQ5MIZ7 849 aa22.23■■□□□ 1.15
LINC01238-205ENST00000567549 GPR153Q6NV75 609 aa22.23■■□□□ 1.15
LINC01238-205ENST00000567549 SAMD1Q6SPF0 538 aaPredicted RBP22.23■■□□□ 1.15
LINC01238-205ENST00000567549 ZNF444Q8N0Y2 327 aaPredicted RBP22.23■■□□□ 1.15
LINC01238-205ENST00000567549 NPLOC4Q8TAT6 608 aa22.23■■□□□ 1.15
LINC01238-205ENST00000567549 FLRT1Q9NZU1 646 aa22.23■■□□□ 1.15
LINC01238-205ENST00000567549 SYNPO2Q9UMS6 1093 aa22.23■■□□□ 1.15
LINC01238-205ENST00000567549 RLFQ13129 1914 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms