RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SNX14Q9Y5W7 946 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 ZHX2Q9Y6X8 837 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.25
KARS-207ENST00000566560 ZBTB48P10074 688 aaPredicted RBP13.52□□□□□ -0.25
KARS-207ENST00000566560 GJA5P36382 358 aa13.52□□□□□ -0.25
KARS-207ENST00000566560 ATP2B2Q01814 1243 aa13.52□□□□□ -0.25
KARS-207ENST00000566560 TSGA10IPQ3SY00 556 aa13.52□□□□□ -0.25
KARS-207ENST00000566560 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
KARS-207ENST00000566560 CYP4F22Q6NT55 531 aa13.52□□□□□ -0.25
KARS-207ENST00000566560 IQCA1Q86XH1 822 aa13.52□□□□□ -0.25
KARS-207ENST00000566560 MB21D2Q8IYB1 491 aaPredicted RBP13.52□□□□□ -0.25
KARS-207ENST00000566560 UBAC1Q9BSL1 405 aa13.52□□□□□ -0.25
KARS-207ENST00000566560 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.52□□□□□ -0.25
KARS-207ENST00000566560 KANSL2Q9H9L4 492 aa13.52□□□□□ -0.25
KARS-207ENST00000566560 ARHGEF10LQ9HCE6 1279 aa13.52□□□□□ -0.25
KARS-207ENST00000566560 TRIM75PA6NK02 468 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 IRF6O14896 467 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 NMT2O60551 498 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 MTMR2Q13614 643 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 DEFB115Q30KQ5 88 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 ADCK5Q3MIX3 580 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 PPP4R3BQ5MIZ7 849 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 CYB5R4Q7L1T6 521 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 ZNF280CQ8ND82 737 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 CCDC102AQ96A19 550 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 CAPNS2Q96L46 248 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 JAKMIP1Q96N16 626 aaKnown RBP13.51□□□□□ -0.25
KARS-207ENST00000566560 NEK1Q96PY6 1258 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 ZKSCAN3Q9BRR0 538 aa13.51□□□□□ -0.25
KARS-207ENST00000566560 LARP6Q9BRS8 491 aaKnown RBP13.51□□□□□ -0.25
KARS-207ENST00000566560 TNKSO95271 1327 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 FAM155AB1AL88 458 aaPredicted RBP13.5□□□□□ -0.25
KARS-207ENST00000566560 TTLL1O95922 423 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 EEF2P13639 858 aaKnown RBP13.5□□□□□ -0.25
KARS-207ENST00000566560 PSMA5P28066 241 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 MCM5P33992 734 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 ECE1P42892 770 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 ANTXR2P58335 489 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 ANAPC15P60006 121 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 SPP2Q13103 211 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 ZSCAN10Q96SZ4 725 aaPredicted RBP13.5□□□□□ -0.25
KARS-207ENST00000566560 WDR18Q9BV38 432 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 C22orf23Q9BZE7 217 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 SH2D4AQ9H788 454 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 GPHNQ9NQX3 736 aaPredicted RBP13.5□□□□□ -0.25
KARS-207ENST00000566560 IL17RBQ9NRM6 502 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 MTMR4Q9NYA4 1195 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 ZSWIM5Q9P217 1185 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 STX8Q9UNK0 236 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 KCNH4Q9UQ05 1017 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 AFG3L2Q9Y4W6 797 aa13.5□□□□□ -0.25
KARS-207ENST00000566560 PRC1O43663 620 aa13.49□□□□□ -0.25
KARS-207ENST00000566560 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
KARS-207ENST00000566560 CASTP20810 708 aaKnown RBP13.49□□□□□ -0.25
KARS-207ENST00000566560 SNAPC2Q13487 334 aa13.49□□□□□ -0.25
KARS-207ENST00000566560 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
KARS-207ENST00000566560 SART3Q15020 963 aaKnown RBP13.49□□□□□ -0.25
KARS-207ENST00000566560 ZYXQ15942 572 aaKnown RBP13.49□□□□□ -0.25
KARS-207ENST00000566560 CCDC178Q5BJE1 867 aa13.49□□□□□ -0.25
KARS-207ENST00000566560 BLOC1S2Q6QNY1 142 aa13.49□□□□□ -0.25
KARS-207ENST00000566560 CHST3Q7LGC8 479 aa13.49□□□□□ -0.25
KARS-207ENST00000566560 LRRC47Q8N1G4 583 aaKnown RBP13.49□□□□□ -0.25
KARS-207ENST00000566560 ACER1Q8TDN7 264 aa13.49□□□□□ -0.25
KARS-207ENST00000566560 TCP11L1Q9NUJ3 509 aa13.49□□□□□ -0.25
KARS-207ENST00000566560 NYAP2Q9P242 653 aa13.49□□□□□ -0.25
KARS-207ENST00000566560 WDR19Q8NEZ3 1342 aa13.48□□□□□ -0.25
KARS-207ENST00000566560 A0A0G2JLL6 359 aaPredicted RBP13.48□□□□□ -0.25
KARS-207ENST00000566560 ERICH2A1L162 156 aa13.48□□□□□ -0.25
KARS-207ENST00000566560 USP17L10C9JJH3 530 aa13.48□□□□□ -0.25
KARS-207ENST00000566560 CXCL11O14625 94 aa13.48□□□□□ -0.25
KARS-207ENST00000566560 IFIT3O14879 490 aaKnown RBP13.48□□□□□ -0.25
KARS-207ENST00000566560 GTF2A2P52657 109 aa13.48□□□□□ -0.25
KARS-207ENST00000566560 HMGCS2P54868 508 aa13.48□□□□□ -0.25
KARS-207ENST00000566560 BACE1P56817 501 aa13.48□□□□□ -0.25
KARS-207ENST00000566560 NOGQ13253 232 aa13.48□□□□□ -0.25
KARS-207ENST00000566560 MFSD10Q14728 455 aa13.48□□□□□ -0.25
KARS-207ENST00000566560 PRRT2Q7Z6L0 340 aaPredicted RBP13.48□□□□□ -0.25
KARS-207ENST00000566560 ENAHQ8N8S7 591 aaPredicted RBP13.48□□□□□ -0.25
KARS-207ENST00000566560 KIAA1683Q9H0B3 1180 aa13.48□□□□□ -0.25
KARS-207ENST00000566560 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
KARS-207ENST00000566560 CCL15-CCL14A0A0B4J2E2 113 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 A0A1W2PRG0 241 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 MANSC4A6NHS7 340 aaPredicted RBP13.47□□□□□ -0.25
KARS-207ENST00000566560 RAD21O60216 631 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 TOP1P11387 765 aaKnown RBP13.47□□□□□ -0.25
KARS-207ENST00000566560 CETPP11597 493 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 CPA1P15085 419 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 RBM25P49756 843 aaKnown RBP13.47□□□□□ -0.25
KARS-207ENST00000566560 VEGFBP49765 207 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 USP14P54578 494 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 DGKZQ13574 1117 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 CCL15Q16663 113 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 TMEM67Q5HYA8 995 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 IFIT1BQ5T764 474 aaKnown RBP13.47□□□□□ -0.25
KARS-207ENST00000566560 GADL1Q6ZQY3 521 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 DHX32Q7L7V1 743 aaKnown RBP13.47□□□□□ -0.25
KARS-207ENST00000566560 TMC2Q8TDI7 906 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 DDX27Q96GQ7 796 aaKnown RBP13.47□□□□□ -0.25
KARS-207ENST00000566560 TMEM87BQ96K49 555 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 TCEANC2Q96MN5 208 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms