RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 GJA5P36382 358 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 LIFRP42702 1097 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 TFAP4Q01664 338 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 NFIAQ12857 509 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 APOBEC3HQ6NTF7 200 aaKnown RBP7.26□□□□□ -1.25
CHD9-217ENST00000565832 CAVIN1Q6NZI2 390 aaKnown RBP7.26□□□□□ -1.25
CHD9-217ENST00000565832 PODNQ7Z5L7 613 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 SGMS1Q86VZ5 419 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 TBC1D22AQ8WUA7 517 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
CHD9-217ENST00000565832 UBAC1Q9BSL1 405 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 IL17RBQ9NRM6 502 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 ORC3Q9UBD5 711 aaPredicted RBP7.26□□□□□ -1.25
CHD9-217ENST00000565832 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.26□□□□□ -1.25
CHD9-217ENST00000565832 WDR19Q8NEZ3 1342 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 ADAMTSL1Q8N6G6 1762 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 PPIP5K2O43314 1243 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 HOXA2O43364 376 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 RAD17O75943 681 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 PDCP20941 246 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 EMP3P54852 163 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 SBK1Q52WX2 424 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 DACT2Q5SW24 774 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 GAS2L3Q86XJ1 694 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 FANCBQ8NB91 859 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 HLA-CQ95604 372 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 EYA3Q99504 573 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 NOL10Q9BSC4 688 aaKnown RBP7.26□□□□□ -1.25
CHD9-217ENST00000565832 SLC4A5Q9BY07 1137 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 USP40Q9NVE5 1235 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 MTMR7Q9Y216 660 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 CDK5RAP2Q96SN8 1893 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 FLT1P17948 1338 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 ERICH2A1L162 156 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 TSPY2A6NKD2 308 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 GOLGA8AA7E2F4 631 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 WDHD1O75717 1129 aaPredicted RBP7.25□□□□□ -1.25
CHD9-217ENST00000565832 RBM5P52756 815 aaKnown RBP eCLIP7.25□□□□□ -1.25
CHD9-217ENST00000565832 TCP10Q12799 353 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 LHX8Q68G74 356 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 RCSD1Q6JBY9 416 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 CDC42EP5Q6NZY7 148 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 RASGRP2Q7LDG7 609 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 ZNF654Q8IZM8 581 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 MTMR14Q8NCE2 650 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 SLC16A10Q8TF71 515 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 PIBF1Q8WXW3 757 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 SLC26A6Q9BXS9 759 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 MKNK2Q9HBH9 465 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 ARPP21Q9UBL0 812 aaPredicted RBP7.25□□□□□ -1.25
CHD9-217ENST00000565832 GAKO14976 1311 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 DHX16O60231 1041 aaKnown RBP7.25□□□□□ -1.25
CHD9-217ENST00000565832 VEGFAP15692 232 aaPredicted RBP7.25□□□□□ -1.25
CHD9-217ENST00000565832 CRKP46108 304 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 GUCA2AQ02747 115 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 PDE4BQ07343 736 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 KIAA2012Q0VF49 1180 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 RESTQ13127 1097 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 SART3Q15020 963 aaKnown RBP7.25□□□□□ -1.25
CHD9-217ENST00000565832 KLHL40Q2TBA0 621 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 IFIT1BQ5T764 474 aaKnown RBP7.25□□□□□ -1.25
CHD9-217ENST00000565832 TTC6Q86TZ1 520 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 TMEM63CQ9P1W3 806 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 SCAF8Q9UPN6 1271 aaKnown RBP7.25□□□□□ -1.25
CHD9-217ENST00000565832 VPS9D1Q9Y2B5 631 aa7.25□□□□□ -1.25
CHD9-217ENST00000565832 SNED1Q8TER0 1413 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 FAM196BA6NMK8 535 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 KIF28PB7ZC32 967 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 ORC4O43929 436 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 AP1G2O75843 785 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 PLEKHA8P1O95397 391 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 IARSP41252 1262 aaKnown RBP7.24□□□□□ -1.25
CHD9-217ENST00000565832 CDK8P49336 464 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 USP46P62068 366 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 HMGN5P82970 282 aaKnown RBP7.24□□□□□ -1.25
CHD9-217ENST00000565832 TROAPQ12815 778 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 SHROOM1Q2M3G4 852 aaPredicted RBP7.24□□□□□ -1.25
CHD9-217ENST00000565832 STRIP1Q5VSL9 837 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 SYNE3Q6ZMZ3 975 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 NBPF11Q86T75 865 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 IQCA1Q86XH1 822 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 CCDC125Q86Z20 511 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 FBXO18Q8NFZ0 1043 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 TEKT1Q969V4 418 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 C8orf76Q96K31 380 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 PCDHGC3Q9UN70 934 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 PCNTO95613 3336 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 C10orf71Q711Q0 1435 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 COL4A5P29400 1685 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 TIAM2Q8IVF5 1701 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 KIAA1551Q9HCM1 1747 aa7.24□□□□□ -1.25
CHD9-217ENST00000565832 FDX1P10109 184 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 RASA1P20936 1047 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 RTN1Q16799 776 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 SKOR2Q2VWA4 1001 aaPredicted RBP7.23□□□□□ -1.25
CHD9-217ENST00000565832 CLEC10AQ8IUN9 316 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 ZNF444Q8N0Y2 327 aaPredicted RBP7.23□□□□□ -1.25
CHD9-217ENST00000565832 LARGE2Q8N3Y3 721 aa7.23□□□□□ -1.25
CHD9-217ENST00000565832 CRACR2BQ8N4Y2 399 aaPredicted RBP7.23□□□□□ -1.25
CHD9-217ENST00000565832 SHISA4Q96DD7 197 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms