RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 ZNF396Q96N95 335 aaPredicted RBP22.34■■□□□ 1.17
PKD1-230ENST00000565639 ZNF541Q9H0D2 1346 aa22.33■■□□□ 1.17
PKD1-230ENST00000565639 SHTN1A0MZ66 631 aa22.33■■□□□ 1.17
PKD1-230ENST00000565639 MPHOSPH10O00566 681 aaKnown RBP22.33■■□□□ 1.17
PKD1-230ENST00000565639 CNOT7Q9UIV1 285 aaKnown RBP22.33■■□□□ 1.17
PKD1-230ENST00000565639 FAM196BA6NMK8 535 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 SLURP2P0DP57 97 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 STAG2Q8N3U4 1231 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 MMP1P03956 469 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 PARP1P09874 1014 aaKnown RBP22.32■■□□□ 1.16
PKD1-230ENST00000565639 U2AF2P26368 475 aaKnown RBP eCLIP22.32■■□□□ 1.16
PKD1-230ENST00000565639 SMARCA1P28370 1054 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 TNNI2P48788 182 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 UBE2HP62256 183 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 TMEM179Q6ZVK1 233 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 GPT2Q8TD30 523 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 KANSL2Q9H9L4 492 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 CLIP2Q9UDT6 1046 aa22.32■■□□□ 1.16
PKD1-230ENST00000565639 SBF1O95248 1867 aa22.31■■□□□ 1.16
PKD1-230ENST00000565639 TBC1D12O60347 775 aa22.31■■□□□ 1.16
PKD1-230ENST00000565639 TNFAIP1Q13829 316 aa22.31■■□□□ 1.16
PKD1-230ENST00000565639 SAFBQ15424 915 aaKnown RBP eCLIP22.31■■□□□ 1.16
PKD1-230ENST00000565639 NYAP2Q9P242 653 aa22.31■■□□□ 1.16
PKD1-230ENST00000565639 TFIP11Q9UBB9 837 aaKnown RBP22.31■■□□□ 1.16
PKD1-230ENST00000565639 KIF28PB7ZC32 967 aa22.3■■□□□ 1.16
PKD1-230ENST00000565639 GPC2Q8N158 579 aa22.3■■□□□ 1.16
PKD1-230ENST00000565639 LEO1Q8WVC0 666 aaPredicted RBP22.3■■□□□ 1.16
PKD1-230ENST00000565639 SPATA32Q96LK8 384 aa22.3■■□□□ 1.16
PKD1-230ENST00000565639 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.3■■□□□ 1.16
PKD1-230ENST00000565639 SNHG28P0DPA3 235 aa22.3■■□□□ 1.16
PKD1-230ENST00000565639 ABCB5Q2M3G0 1257 aa22.3■■□□□ 1.16
PKD1-230ENST00000565639 MKL1Q969V6 931 aa22.3■■□□□ 1.16
PKD1-230ENST00000565639 SPZ1Q9BXG8 430 aa22.3■■□□□ 1.16
PKD1-230ENST00000565639 PGAP2Q9UHJ9 254 aa22.3■■□□□ 1.16
PKD1-230ENST00000565639 KLRF2D3W0D1 207 aa22.29■■□□□ 1.16
PKD1-230ENST00000565639 GADD45BO75293 160 aaPredicted RBP22.29■■□□□ 1.16
PKD1-230ENST00000565639 PDHBP11177 359 aa22.29■■□□□ 1.16
PKD1-230ENST00000565639 SCG2P13521 617 aa22.29■■□□□ 1.16
PKD1-230ENST00000565639 PFKFB3Q16875 520 aaPredicted RBP22.29■■□□□ 1.16
PKD1-230ENST00000565639 MYSM1Q5VVJ2 828 aa22.29■■□□□ 1.16
PKD1-230ENST00000565639 TMEM39BQ9GZU3 492 aa22.29■■□□□ 1.16
PKD1-230ENST00000565639 H7C1D1 291 aa22.29■■□□□ 1.16
PKD1-230ENST00000565639 EGFRP00533 1210 aa22.29■■□□□ 1.16
PKD1-230ENST00000565639 GNL2Q13823 731 aaKnown RBP22.29■■□□□ 1.16
PKD1-230ENST00000565639 ASPRV1Q53RT3 343 aa22.29■■□□□ 1.16
PKD1-230ENST00000565639 RBM26Q5T8P6 1007 aaKnown RBP22.29■■□□□ 1.16
PKD1-230ENST00000565639 CLEC10AQ8IUN9 316 aa22.29■■□□□ 1.16
PKD1-230ENST00000565639 FOXP1Q9H334 677 aaPredicted RBP22.29■■□□□ 1.16
PKD1-230ENST00000565639 UTRNP46939 3433 aa22.28■■□□□ 1.16
PKD1-230ENST00000565639 MAP3K10Q02779 954 aa22.28■■□□□ 1.16
PKD1-230ENST00000565639 GSE1Q14687 1217 aa22.28■■□□□ 1.16
PKD1-230ENST00000565639 SAMD7Q7Z3H4 446 aa22.28■■□□□ 1.16
PKD1-230ENST00000565639 LRRC47Q8N1G4 583 aaKnown RBP22.28■■□□□ 1.16
PKD1-230ENST00000565639 CABP5Q9NP86 173 aa22.28■■□□□ 1.16
PKD1-230ENST00000565639 RCOR1Q9UKL0 485 aa22.28■■□□□ 1.16
PKD1-230ENST00000565639 MTMR7Q9Y216 660 aa22.28■■□□□ 1.16
PKD1-230ENST00000565639 MYH4Q9Y623 1939 aa22.27■■□□□ 1.16
PKD1-230ENST00000565639 USP17L5A8MUK1 530 aa22.27■■□□□ 1.16
PKD1-230ENST00000565639 KIF4BQ2VIQ3 1234 aa22.27■■□□□ 1.16
PKD1-230ENST00000565639 USP17L2Q6R6M4 530 aa22.27■■□□□ 1.16
PKD1-230ENST00000565639 DIS3L2Q8IYB7 885 aaKnown RBP22.27■■□□□ 1.16
PKD1-230ENST00000565639 USP28Q96RU2 1077 aa22.27■■□□□ 1.16
PKD1-230ENST00000565639 PHF20Q9BVI0 1012 aa22.27■■□□□ 1.16
PKD1-230ENST00000565639 RTEL1Q9NZ71 1219 aa22.27■■□□□ 1.16
PKD1-230ENST00000565639 KCNJ14Q9UNX9 436 aa22.27■■□□□ 1.16
PKD1-230ENST00000565639 hCG_1642624A0A1W2PR95 340 aa22.27■■□□□ 1.15
PKD1-230ENST00000565639 SEPT2Q15019 361 aa22.27■■□□□ 1.15
PKD1-230ENST00000565639 FAM177A1Q8N128 213 aaPredicted RBP22.27■■□□□ 1.15
PKD1-230ENST00000565639 SH3GLB2Q9NR46 395 aa22.27■■□□□ 1.15
PKD1-230ENST00000565639 VPS54Q9P1Q0 977 aa22.27■■□□□ 1.15
PKD1-230ENST00000565639 CYTH3O43739 400 aa22.26■■□□□ 1.15
PKD1-230ENST00000565639 GDF11O95390 407 aa22.26■■□□□ 1.15
PKD1-230ENST00000565639 GOLGA8HP0CJ92 632 aa22.26■■□□□ 1.15
PKD1-230ENST00000565639 EEF2P13639 858 aaKnown RBP22.26■■□□□ 1.15
PKD1-230ENST00000565639 ICA1Q05084 483 aa22.26■■□□□ 1.15
PKD1-230ENST00000565639 RASA3Q14644 834 aa22.26■■□□□ 1.15
PKD1-230ENST00000565639 SLC35G1Q2M3R5 365 aa22.26■■□□□ 1.15
PKD1-230ENST00000565639 TBC1D10BQ4KMP7 808 aaPredicted RBP22.26■■□□□ 1.15
PKD1-230ENST00000565639 NOSTRINQ8IVI9 506 aa22.26■■□□□ 1.15
PKD1-230ENST00000565639 GZF1Q9H116 711 aaPredicted RBP22.26■■□□□ 1.15
PKD1-230ENST00000565639 POLR3EQ9NVU0 708 aa22.26■■□□□ 1.15
PKD1-230ENST00000565639 GPRC5DQ9NZD1 345 aa22.26■■□□□ 1.15
PKD1-230ENST00000565639 SYNPO2Q9UMS6 1093 aa22.26■■□□□ 1.15
PKD1-230ENST00000565639 YBX3P16989 372 aaKnown RBP eCLIP22.25■■□□□ 1.153e-6■□□□□ 8.2
PKD1-230ENST00000565639 SHISA4Q96DD7 197 aa22.25■■□□□ 1.15
PKD1-230ENST00000565639 BAZ2BQ9UIF8 2168 aaKnown RBP22.25■■□□□ 1.15
PKD1-230ENST00000565639 BTBD18B2RXH4 712 aa22.25■■□□□ 1.15
PKD1-230ENST00000565639 GH2P01242 217 aa22.25■■□□□ 1.15
PKD1-230ENST00000565639 ATP2B2Q01814 1243 aa22.25■■□□□ 1.15
PKD1-230ENST00000565639 ZNF543Q08ER8 600 aa22.25■■□□□ 1.15
PKD1-230ENST00000565639 RRP1BQ14684 758 aaKnown RBP22.25■■□□□ 1.15
PKD1-230ENST00000565639 GPATCH4Q5T3I0 446 aaKnown RBP22.25■■□□□ 1.15
PKD1-230ENST00000565639 RASGRP2Q7LDG7 609 aa22.25■■□□□ 1.15
PKD1-230ENST00000565639 NASPP49321 788 aaPredicted RBP22.24■■□□□ 1.15
PKD1-230ENST00000565639 SHROOM1Q2M3G4 852 aaPredicted RBP22.24■■□□□ 1.15
PKD1-230ENST00000565639 CAVIN1Q6NZI2 390 aaKnown RBP22.24■■□□□ 1.15
PKD1-230ENST00000565639 SIAH1Q8IUQ4 282 aa22.24■■□□□ 1.15
PKD1-230ENST00000565639 RIOX1Q9H6W3 641 aa22.24■■□□□ 1.15
PKD1-230ENST00000565639 BRMS1Q9HCU9 246 aa22.24■■□□□ 1.15
PKD1-230ENST00000565639 HACL1Q9UJ83 578 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms