RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 FAM229AH3BQW9 127 aa8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 CILPO75339 1184 aa8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 LIG1P18858 919 aa8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 MCM4P33991 863 aa8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 NASPP49321 788 aaPredicted RBP8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 MPP2Q14168 576 aa8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 DUOXA2Q1HG44 320 aa8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 CWF19L2Q2TBE0 894 aaKnown RBP8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 UBASH3BQ8TF42 649 aa8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 CAMKK2Q96RR4 588 aa8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 RAD18Q9NS91 495 aa8.51□□□□□ -1.05
HERPUD1-208ENST00000563911 PLCH1Q4KWH8 1693 aa8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 DLL1O00548 723 aa8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 TECPR2O15040 1411 aa8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 ZNF862O60290 1169 aa8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 GTF2F1P35269 517 aaKnown RBP eCLIP8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 RPL6Q02878 288 aaKnown RBP8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 PODNQ7Z5L7 613 aa8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 MCF2L2Q86YR7 1114 aa8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 ZSCAN1Q8NBB4 408 aa8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 UBXN4Q92575 508 aa8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 WDR89Q96FK6 387 aaPredicted RBP8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 CACNA2D2Q9NY47 1150 aa8.5□□□□□ -1.05
HERPUD1-208ENST00000563911 LRPPRCP42704 1394 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 RGPD8O14715 1765 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 PPLO60437 1756 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 DLGAP3O95886 979 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 COL9A2Q14055 689 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 PRRT3Q5FWE3 981 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 EXOSC6Q5RKV6 272 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 SLITRK4Q8IW52 837 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 BEND7Q8N7W2 519 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 CPLX3Q8WVH0 158 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 DHX38Q92620 1227 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 LRRC3Q9BY71 257 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 BTG4Q9NY30 223 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 RPGRIP1LQ68CZ1 1315 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 NRAPQ86VF7 1730 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 ABCA3Q99758 1704 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 FMN2Q9NZ56 1722 aa8.49□□□□□ -1.05
HERPUD1-208ENST00000563911 ABCC11Q96J66 1382 aa8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 TNS3Q68CZ2 1445 aa8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 KIF1BO60333 1816 aa8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 SSBP05455 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 FGRP09769 529 aa8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 SLFN14P0C7P3 912 aa8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 YY1P25490 414 aa8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 CDK8P49336 464 aa8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 REC114Q7Z4M0 266 aa8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 BRMS1Q9HCU9 246 aa8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 NOP53Q9NZM5 478 aaKnown RBP8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 CNTNAP5Q8WYK1 1306 aa8.48□□□□□ -1.05
HERPUD1-208ENST00000563911 TNS1Q9HBL0 1735 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 NWD2Q9ULI1 1742 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 AOC2O75106 756 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 WISP1O95388 367 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 ELNP15502 786 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 SOX9P48436 509 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 ZNF165P49910 485 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 INPP5AQ14642 412 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 KIF4BQ2VIQ3 1234 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 RGL3Q3MIN7 710 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 WIPI1Q5MNZ9 446 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 IGF2-ASQ6U949 168 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 ACAD11Q709F0 780 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 HDXQ7Z353 690 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 PMFBP1Q8TBY8 1022 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 ELMO3Q96BJ8 720 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 RUSC1Q9BVN2 902 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 SPATA31A5Q5VU36 1347 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 SPATA31A7Q8IWB4 1347 aa8.47□□□□□ -1.05
HERPUD1-208ENST00000563911 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.05
HERPUD1-208ENST00000563911 DISP2A7MBM2 1401 aa8.46□□□□□ -1.05
HERPUD1-208ENST00000563911 UTRNP46939 3433 aa8.46□□□□□ -1.05
HERPUD1-208ENST00000563911 DCDC2CA8MYV0 355 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 NUTM2GQ5VZR2 741 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 FBXW10Q5XX13 1052 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 LRFN4Q6PJG9 635 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 GK5Q6ZS86 529 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 PLPPR2Q96GM1 343 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 WDR18Q9BV38 432 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 MRPL18Q9H0U6 180 aaKnown RBP8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 ADAMTS8Q9UP79 889 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 SNCAIPQ9Y6H5 919 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 SBNO1A3KN83 1393 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 SPATA31E1Q6ZUB1 1445 aa8.46□□□□□ -1.06
HERPUD1-208ENST00000563911 NRXN1Q9ULB1 1477 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 GRIN3BO60391 1043 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 STK10O94804 968 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 SAFB2Q14151 953 aaKnown RBP eCLIP8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 GRIK4Q16099 956 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 AKAP4Q5JQC9 854 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 KIAA1211Q6ZU35 1233 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 C12orf40Q86WS4 652 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 FERD3LQ96RJ6 166 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 PDGFDQ9GZP0 370 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 STRIP2Q9ULQ0 834 aa8.45□□□□□ -1.06
HERPUD1-208ENST00000563911 PPT2Q9UMR5 302 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms