RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 FOXP2O15409 715 aa22.68■■□□□ 1.22
TRADD-203ENST00000563348 ADCY3O60266 1144 aa22.68■■□□□ 1.22
TRADD-203ENST00000563348 COG2Q14746 738 aa22.68■■□□□ 1.22
TRADD-203ENST00000563348 MCMDC2Q4G0Z9 681 aa22.68■■□□□ 1.22
TRADD-203ENST00000563348 ZNF444Q8N0Y2 327 aaPredicted RBP22.68■■□□□ 1.22
TRADD-203ENST00000563348 PXYLP1Q8TE99 480 aa22.68■■□□□ 1.22
TRADD-203ENST00000563348 FAM227BQ96M60 508 aa22.68■■□□□ 1.22
TRADD-203ENST00000563348 HOXC10Q9NYD6 342 aa22.68■■□□□ 1.22
TRADD-203ENST00000563348 MGAMO43451 1857 aa22.68■■□□□ 1.22
TRADD-203ENST00000563348 PDE4DIPQ5VU43 2346 aa22.67■■□□□ 1.22
TRADD-203ENST00000563348 CNMDO75829 334 aa22.67■■□□□ 1.22
TRADD-203ENST00000563348 MYCP01106 439 aaPredicted RBP22.67■■□□□ 1.22
TRADD-203ENST00000563348 SLC3A2P08195 630 aaKnown RBP22.67■■□□□ 1.22
TRADD-203ENST00000563348 ATP2B2Q01814 1243 aa22.67■■□□□ 1.22
TRADD-203ENST00000563348 A0A0D9SFI3 127 aa22.66■■□□□ 1.22
TRADD-203ENST00000563348 SPDYE16A6NNV3 312 aaPredicted RBP22.66■■□□□ 1.22
TRADD-203ENST00000563348 PRDM1O75626 825 aa22.66■■□□□ 1.22
TRADD-203ENST00000563348 MAPK4P31152 587 aa22.66■■□□□ 1.22
TRADD-203ENST00000563348 PDE4BQ07343 736 aa22.66■■□□□ 1.22
TRADD-203ENST00000563348 PPARAQ07869 468 aa22.66■■□□□ 1.22
TRADD-203ENST00000563348 NMIQ13287 307 aaPredicted RBP22.66■■□□□ 1.22
TRADD-203ENST00000563348 ALX1Q15699 326 aa22.66■■□□□ 1.22
TRADD-203ENST00000563348 VPS53Q5VIR6 699 aa22.66■■□□□ 1.22
TRADD-203ENST00000563348 BIN2Q9UBW5 565 aaPredicted RBP22.66■■□□□ 1.22
TRADD-203ENST00000563348 EN2P19622 333 aaPredicted RBP22.65■■□□□ 1.22
TRADD-203ENST00000563348 SDSP20132 328 aa22.65■■□□□ 1.22
TRADD-203ENST00000563348 UBXN2AP68543 259 aa22.65■■□□□ 1.22
TRADD-203ENST00000563348 MTFR1Q15390 333 aa22.65■■□□□ 1.22
TRADD-203ENST00000563348 CCAR1Q8IX12 1150 aaKnown RBP22.65■■□□□ 1.22
TRADD-203ENST00000563348 SPICE1Q8N0Z3 855 aa22.65■■□□□ 1.22
TRADD-203ENST00000563348 TANGO6Q9C0B7 1094 aa22.65■■□□□ 1.22
TRADD-203ENST00000563348 PORCNQ9H237 461 aa22.65■■□□□ 1.22
TRADD-203ENST00000563348 NYAP2Q9P242 653 aa22.65■■□□□ 1.22
TRADD-203ENST00000563348 MYH8P13535 1937 aa22.65■■□□□ 1.22
TRADD-203ENST00000563348 IGKV6D-41A0A0C4DH26 115 aa22.64■■□□□ 1.21
TRADD-203ENST00000563348 WDR46O15213 610 aaKnown RBP22.64■■□□□ 1.21
TRADD-203ENST00000563348 ELNP15502 786 aa22.64■■□□□ 1.21
TRADD-203ENST00000563348 CCNA1P78396 465 aa22.64■■□□□ 1.21
TRADD-203ENST00000563348 BTBD7Q9P203 1132 aa22.64■■□□□ 1.21
TRADD-203ENST00000563348 PDE4AP27815 886 aa22.63■■□□□ 1.21
TRADD-203ENST00000563348 DSG3P32926 999 aa22.63■■□□□ 1.21
TRADD-203ENST00000563348 GOPCQ9HD26 462 aa22.63■■□□□ 1.21
TRADD-203ENST00000563348 ANAPC4Q9UJX5 808 aa22.63■■□□□ 1.21
TRADD-203ENST00000563348 FGAP02671 866 aa22.62■■□□□ 1.21
TRADD-203ENST00000563348 CCL5P13501 91 aa22.62■■□□□ 1.21
TRADD-203ENST00000563348 GPR142Q7Z601 462 aa22.62■■□□□ 1.21
TRADD-203ENST00000563348 PLEKHH3Q7Z736 793 aa22.62■■□□□ 1.21
TRADD-203ENST00000563348 ZNF589Q86UQ0 364 aaPredicted RBP22.62■■□□□ 1.21
TRADD-203ENST00000563348 NEDD1Q8NHV4 660 aa22.62■■□□□ 1.21
TRADD-203ENST00000563348 MKL1Q969V6 931 aa22.62■■□□□ 1.21
TRADD-203ENST00000563348 NUDT12Q9BQG2 462 aa22.62■■□□□ 1.21
TRADD-203ENST00000563348 FLOT1O75955 427 aa22.61■■□□□ 1.21
TRADD-203ENST00000563348 HSPD1P10809 573 aaKnown RBP22.61■■□□□ 1.21
TRADD-203ENST00000563348 MB21D1Q8N884 522 aa22.61■■□□□ 1.21
TRADD-203ENST00000563348 SOCS4Q8WXH5 440 aa22.61■■□□□ 1.21
TRADD-203ENST00000563348 CEP95Q96GE4 821 aa22.61■■□□□ 1.21
TRADD-203ENST00000563348 MTMR4Q9NYA4 1195 aa22.61■■□□□ 1.21
TRADD-203ENST00000563348 CLIP2Q9UDT6 1046 aa22.61■■□□□ 1.21
TRADD-203ENST00000563348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.61■■□□□ 1.21
TRADD-203ENST00000563348 CCDC171Q6TFL3 1326 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 F5H6K3 240 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 INHAP05111 366 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 GJB1P08034 283 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 TSPY3P0CV98 308 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 TSPY8P0CW00 308 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 XRCC5P13010 732 aaKnown RBP22.6■■□□□ 1.21
TRADD-203ENST00000563348 TFAP4Q01664 338 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 CTDSPL2Q05D32 466 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 KLRC3Q07444 240 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 FAM47AQ5JRC9 791 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 MORN1Q5T089 497 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 USP6NLQ92738 828 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 RNF208Q9H0X6 261 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 BRCA2P51587 3418 aa22.6■■□□□ 1.21
TRADD-203ENST00000563348 HIP1O00291 1037 aa22.59■■□□□ 1.21
TRADD-203ENST00000563348 FGRP09769 529 aa22.59■■□□□ 1.21
TRADD-203ENST00000563348 CYP2B6P20813 491 aa22.59■■□□□ 1.21
TRADD-203ENST00000563348 MFAP1P55081 439 aaKnown RBP22.59■■□□□ 1.21
TRADD-203ENST00000563348 ATG4CQ96DT6 458 aa22.59■■□□□ 1.21
TRADD-203ENST00000563348 UNC93B1Q9H1C4 597 aa22.59■■□□□ 1.21
TRADD-203ENST00000563348 CWC22Q9HCG8 908 aaKnown RBP22.59■■□□□ 1.21
TRADD-203ENST00000563348 INCENPQ9NQS7 918 aa22.59■■□□□ 1.21
TRADD-203ENST00000563348 SYNPO2Q9UMS6 1093 aa22.59■■□□□ 1.21
TRADD-203ENST00000563348 RAD21O60216 631 aa22.58■■□□□ 1.21
TRADD-203ENST00000563348 TTLL1O95922 423 aa22.58■■□□□ 1.21
TRADD-203ENST00000563348 FAM83BQ5T0W9 1011 aa22.58■■□□□ 1.21
TRADD-203ENST00000563348 NKX2-3Q8TAU0 364 aa22.58■■□□□ 1.21
TRADD-203ENST00000563348 MOV10L1Q9BXT6 1211 aaKnown RBP22.58■■□□□ 1.21
TRADD-203ENST00000563348 SPATC1LQ9H0A9 340 aa22.58■■□□□ 1.21
TRADD-203ENST00000563348 DIAPH3Q9NSV4 1193 aa22.58■■□□□ 1.21
TRADD-203ENST00000563348 ADAMTS5Q9UNA0 930 aa22.58■■□□□ 1.21
TRADD-203ENST00000563348 TACC3Q9Y6A5 838 aa22.58■■□□□ 1.21
TRADD-203ENST00000563348 PLIN4Q96Q06 1357 aa22.58■■□□□ 1.21
TRADD-203ENST00000563348 GREB1LQ9C091 1923 aaPredicted RBP22.58■■□□□ 1.21
TRADD-203ENST00000563348 ZMYM6O95789 1325 aa22.57■■□□□ 1.2
TRADD-203ENST00000563348 NDUFB10O96000 172 aa22.57■■□□□ 1.2
TRADD-203ENST00000563348 HMGCRP04035 888 aa22.57■■□□□ 1.2
TRADD-203ENST00000563348 PTPREP23469 700 aa22.57■■□□□ 1.2
TRADD-203ENST00000563348 RGS2P41220 211 aa22.57■■□□□ 1.2
TRADD-203ENST00000563348 CWC27Q6UX04 472 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms