RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 C12orf49Q9H741 205 aa5.99□□□□□ -1.45
HDGFL3-202ENST00000562702 GCM1Q9NP62 436 aa5.99□□□□□ -1.45
HDGFL3-202ENST00000562702 TJP2Q9UDY2 1190 aa5.99□□□□□ -1.45
HDGFL3-202ENST00000562702 PCDHA11Q9Y5I1 949 aa5.99□□□□□ -1.45
HDGFL3-202ENST00000562702 ADRB1P08588 477 aa5.98□□□□□ -1.45
HDGFL3-202ENST00000562702 AFF3P51826 1226 aaKnown RBP5.98□□□□□ -1.45
HDGFL3-202ENST00000562702 TIGD5Q53EQ6 642 aa5.98□□□□□ -1.45
HDGFL3-202ENST00000562702 MCATQ8IVS2 390 aaKnown RBP5.98□□□□□ -1.45
HDGFL3-202ENST00000562702 DTWD2Q8NBA8 298 aa5.98□□□□□ -1.45
HDGFL3-202ENST00000562702 ADAM30Q9UKF2 790 aa5.98□□□□□ -1.45
HDGFL3-202ENST00000562702 HRKO00198 91 aa5.97□□□□□ -1.45
HDGFL3-202ENST00000562702 USP17L7P0C7H9 530 aa5.97□□□□□ -1.45
HDGFL3-202ENST00000562702 PI3P19957 117 aa5.97□□□□□ -1.45
HDGFL3-202ENST00000562702 SRSF3P84103 164 aaKnown RBP5.97□□□□□ -1.45
HDGFL3-202ENST00000562702 SSPNQ14714 243 aa5.97□□□□□ -1.45
HDGFL3-202ENST00000562702 ADGRF1Q5T601 910 aa5.97□□□□□ -1.45
HDGFL3-202ENST00000562702 ZSCAN29Q8IWY8 852 aaPredicted RBP5.97□□□□□ -1.45
HDGFL3-202ENST00000562702 DNAJB8Q8NHS0 232 aa5.97□□□□□ -1.45
HDGFL3-202ENST00000562702 XYLT2Q9H1B5 865 aa5.97□□□□□ -1.45
HDGFL3-202ENST00000562702 GFRA2O00451 464 aa5.96□□□□□ -1.46
HDGFL3-202ENST00000562702 CDK8P49336 464 aa5.96□□□□□ -1.46
HDGFL3-202ENST00000562702 CLEC16AQ2KHT3 1053 aa5.96□□□□□ -1.46
HDGFL3-202ENST00000562702 SKOR2Q2VWA4 1001 aaPredicted RBP5.96□□□□□ -1.46
HDGFL3-202ENST00000562702 CYB5D2Q8WUJ1 264 aa5.96□□□□□ -1.46
HDGFL3-202ENST00000562702 FRMD6Q96NE9 622 aa5.96□□□□□ -1.46
HDGFL3-202ENST00000562702 ASCC2Q9H1I8 757 aaPredicted RBP5.96□□□□□ -1.46
HDGFL3-202ENST00000562702 MIR1-1HGQ9H1L0 117 aa5.96□□□□□ -1.46
HDGFL3-202ENST00000562702 OTOL1A6NHN0 477 aaPredicted RBP5.95□□□□□ -1.46
HDGFL3-202ENST00000562702 PSPNO60542 156 aa5.95□□□□□ -1.46
HDGFL3-202ENST00000562702 YARSP54577 528 aaKnown RBP5.95□□□□□ -1.46
HDGFL3-202ENST00000562702 CHMP4BP1P59074 171 aa5.95□□□□□ -1.46
HDGFL3-202ENST00000562702 SLC14A2Q15849 920 aa5.95□□□□□ -1.46
HDGFL3-202ENST00000562702 RNF141Q8WVD5 230 aa5.95□□□□□ -1.46
HDGFL3-202ENST00000562702 ABLIM1O14639 778 aa5.94□□□□□ -1.46
HDGFL3-202ENST00000562702 TNNI2P48788 182 aa5.94□□□□□ -1.46
HDGFL3-202ENST00000562702 SEPT6Q14141 434 aa5.94□□□□□ -1.46
HDGFL3-202ENST00000562702 CCDC85BQ15834 202 aaPredicted RBP5.94□□□□□ -1.46
HDGFL3-202ENST00000562702 TSNAXIP1Q2TAA8 658 aa5.94□□□□□ -1.46
HDGFL3-202ENST00000562702 SPATS1Q496A3 300 aa5.94□□□□□ -1.46
HDGFL3-202ENST00000562702 RETREG2Q8NC44 543 aa5.94□□□□□ -1.46
HDGFL3-202ENST00000562702 DACT3Q96B18 629 aaPredicted RBP5.94□□□□□ -1.46
HDGFL3-202ENST00000562702 MBD1Q9UIS9 605 aaPredicted RBP5.94□□□□□ -1.46
HDGFL3-202ENST00000562702 ZC3H12DA2A288 527 aaKnown RBP5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 SLC22A31A6NKX4 558 aa5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 N4BP3O15049 544 aa5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 GGNQ86UU5 652 aa5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 SIRT2Q8IXJ6 389 aa5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 ZDHHC14Q8IZN3 488 aa5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 FAM13CQ8NE31 585 aa5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 TEPSINQ96N21 525 aa5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 TMPRSS5Q9H3S3 457 aa5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 CRTAC1Q9NQ79 661 aa5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 ZMYM5Q9UJ78 669 aa5.93□□□□□ -1.46
HDGFL3-202ENST00000562702 TEKQ02763 1124 aa5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 RPL6Q02878 288 aaKnown RBP5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 FMR1Q06787 632 aaKnown RBP eCLIP5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 ZXDCQ2QGD7 858 aaPredicted RBP5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 FEZF2Q8TBJ5 459 aa5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 PANK1Q8TE04 598 aa5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 LINC01599Q8WXQ3 324 aa5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 ACSF2Q96CM8 615 aaPredicted RBP5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 SHISA4Q96DD7 197 aa5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 PCDHB5Q9Y5E4 795 aa5.92□□□□□ -1.46
HDGFL3-202ENST00000562702 SSU72P8A0A1W2PR75 194 aa5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 RLBP1P12271 317 aa5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 PLCG1P19174 1290 aa5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 RPL10P27635 214 aaKnown RBP5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 TMEM62Q0P6H9 643 aa5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 CNKSR3Q6P9H4 555 aa5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 RNF111Q6ZNA4 994 aa5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 AGMOQ6ZNB7 445 aa5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 NLRX1Q86UT6 975 aa5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 ASPNQ9BXN1 380 aa5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 LUC7LQ9NQ29 371 aaKnown RBP5.91□□□□□ -1.46
HDGFL3-202ENST00000562702 RBM47A0AV96 593 aaKnown RBP5.9□□□□□ -1.46
HDGFL3-202ENST00000562702 EIF4BP23588 611 aaKnown RBP5.9□□□□□ -1.46
HDGFL3-202ENST00000562702 KIR2DL1P43626 348 aaPredicted RBP5.9□□□□□ -1.46
HDGFL3-202ENST00000562702 KIR2DL2P43627 348 aaPredicted RBP5.9□□□□□ -1.46
HDGFL3-202ENST00000562702 GALK1P51570 392 aa5.9□□□□□ -1.46
HDGFL3-202ENST00000562702 NFKB2Q00653 900 aa5.9□□□□□ -1.46
HDGFL3-202ENST00000562702 PLP2Q04941 152 aa5.9□□□□□ -1.46
HDGFL3-202ENST00000562702 ENOX1Q8TC92 643 aaKnown RBP5.9□□□□□ -1.46
HDGFL3-202ENST00000562702 NRDCO43847 1150 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 BPNT1O95861 308 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 VIPR1P32241 457 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 ARL4AP40617 200 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 LIG3P49916 1009 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 CEP128Q6ZU80 1094 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 WAPLQ7Z5K2 1190 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 FRMD5Q7Z6J6 570 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 CNTD2Q9H8S5 307 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 WWC3Q9ULE0 1092 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 PALD1Q9ULE6 856 aa5.89□□□□□ -1.47
HDGFL3-202ENST00000562702 MPOP05164 745 aa5.88□□□□□ -1.47
HDGFL3-202ENST00000562702 PNLIPP16233 465 aa5.88□□□□□ -1.47
HDGFL3-202ENST00000562702 EPHB3P54753 998 aa5.88□□□□□ -1.47
HDGFL3-202ENST00000562702 MAP3K11Q16584 847 aa5.88□□□□□ -1.47
HDGFL3-202ENST00000562702 MZB1Q8WU39 189 aa5.88□□□□□ -1.47
HDGFL3-202ENST00000562702 JARID2Q92833 1246 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms