RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 RBPJLQ9UBG7 517 aa22.24■■□□□ 1.15
PKD1-223ENST00000561668 ROBO3Q96MS0 1386 aa22.24■■□□□ 1.15
PKD1-223ENST00000561668 RAD21O60216 631 aa22.23■■□□□ 1.15
PKD1-223ENST00000561668 FLT3LGP49771 235 aa22.23■■□□□ 1.15
PKD1-223ENST00000561668 CCNA1P78396 465 aa22.23■■□□□ 1.15
PKD1-223ENST00000561668 COG2Q14746 738 aa22.23■■□□□ 1.15
PKD1-223ENST00000561668 ZNF333Q96JL9 665 aa22.23■■□□□ 1.15
PKD1-223ENST00000561668 GOPCQ9HD26 462 aa22.23■■□□□ 1.15
PKD1-223ENST00000561668 GABRQQ9UN88 632 aa22.23■■□□□ 1.15
PKD1-223ENST00000561668 RABGAP1Q9Y3P9 1069 aa22.23■■□□□ 1.15
PKD1-223ENST00000561668 ZSWIM8A7E2V4 1837 aa22.22■■□□□ 1.15
PKD1-223ENST00000561668 MGAMO43451 1857 aa22.22■■□□□ 1.15
PKD1-223ENST00000561668 MYCP01106 439 aaPredicted RBP22.22■■□□□ 1.15
PKD1-223ENST00000561668 RASA1P20936 1047 aa22.22■■□□□ 1.15
PKD1-223ENST00000561668 UBXN2AP68543 259 aa22.22■■□□□ 1.15
PKD1-223ENST00000561668 PPARAQ07869 468 aa22.22■■□□□ 1.15
PKD1-223ENST00000561668 ZNF589Q86UQ0 364 aaPredicted RBP22.22■■□□□ 1.15
PKD1-223ENST00000561668 SIAH1Q8IUQ4 282 aa22.22■■□□□ 1.15
PKD1-223ENST00000561668 SLAIN1Q8ND83 568 aa22.22■■□□□ 1.15
PKD1-223ENST00000561668 VCPKMTQ9H867 229 aa22.22■■□□□ 1.15
PKD1-223ENST00000561668 ZMYM6O95789 1325 aa22.22■■□□□ 1.15
PKD1-223ENST00000561668 ADCY3O60266 1144 aa22.21■■□□□ 1.15
PKD1-223ENST00000561668 PRDM1O75626 825 aa22.21■■□□□ 1.15
PKD1-223ENST00000561668 MAPK4P31152 587 aa22.21■■□□□ 1.15
PKD1-223ENST00000561668 ERVK-9P63128 1117 aa22.21■■□□□ 1.15
PKD1-223ENST00000561668 ERVK-24P63145 666 aa22.21■■□□□ 1.15
PKD1-223ENST00000561668 BMP2KLQ5H9B9 411 aa22.21■■□□□ 1.15
PKD1-223ENST00000561668 CLEC10AQ8IUN9 316 aa22.21■■□□□ 1.15
PKD1-223ENST00000561668 SPICE1Q8N0Z3 855 aa22.21■■□□□ 1.15
PKD1-223ENST00000561668 DIAPH3Q9NSV4 1193 aa22.21■■□□□ 1.15
PKD1-223ENST00000561668 CCDC171Q6TFL3 1326 aa22.21■■□□□ 1.15
PKD1-223ENST00000561668 TSPY3P0CV98 308 aa22.2■■□□□ 1.14
PKD1-223ENST00000561668 TSPY8P0CW00 308 aa22.2■■□□□ 1.14
PKD1-223ENST00000561668 HSPD1P10809 573 aaKnown RBP22.2■■□□□ 1.14
PKD1-223ENST00000561668 CHMLP26374 656 aa22.2■■□□□ 1.14
PKD1-223ENST00000561668 IRF5Q13568 498 aa22.2■■□□□ 1.14
PKD1-223ENST00000561668 VPS53Q5VIR6 699 aa22.2■■□□□ 1.14
PKD1-223ENST00000561668 PXYLP1Q8TE99 480 aa22.2■■□□□ 1.14
PKD1-223ENST00000561668 TXNRD2Q9NNW7 524 aa22.2■■□□□ 1.14
PKD1-223ENST00000561668 Q3C1V9 767 aa22.19■■□□□ 1.14
PKD1-223ENST00000561668 NYAP2Q9P242 653 aa22.19■■□□□ 1.14
PKD1-223ENST00000561668 ANAPC4Q9UJX5 808 aa22.19■■□□□ 1.14
PKD1-223ENST00000561668 RAD50Q92878 1312 aa22.18■■□□□ 1.14
PKD1-223ENST00000561668 WDR46O15213 610 aaKnown RBP22.18■■□□□ 1.14
PKD1-223ENST00000561668 PEX10O60683 326 aa22.18■■□□□ 1.14
PKD1-223ENST00000561668 FLOT1O75955 427 aa22.18■■□□□ 1.14
PKD1-223ENST00000561668 TFAP4Q01664 338 aa22.18■■□□□ 1.14
PKD1-223ENST00000561668 CWC27Q6UX04 472 aaKnown RBP22.18■■□□□ 1.14
PKD1-223ENST00000561668 LBX2Q6XYB7 198 aa22.18■■□□□ 1.14
PKD1-223ENST00000561668 SKAP1Q86WV1 359 aa22.18■■□□□ 1.14
PKD1-223ENST00000561668 NUDT12Q9BQG2 462 aa22.18■■□□□ 1.14
PKD1-223ENST00000561668 CLIP2Q9UDT6 1046 aa22.18■■□□□ 1.14
PKD1-223ENST00000561668 FGAP02671 866 aa22.17■■□□□ 1.14
PKD1-223ENST00000561668 FGRP09769 529 aa22.17■■□□□ 1.14
PKD1-223ENST00000561668 CTDSPL2Q05D32 466 aa22.17■■□□□ 1.14
PKD1-223ENST00000561668 PPP4R3BQ5MIZ7 849 aa22.17■■□□□ 1.14
PKD1-223ENST00000561668 WDR78Q5VTH9 848 aa22.17■■□□□ 1.14
PKD1-223ENST00000561668 SAMD1Q6SPF0 538 aaPredicted RBP22.17■■□□□ 1.14
PKD1-223ENST00000561668 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.17■■□□□ 1.14
PKD1-223ENST00000561668 POTEFA5A3E0 1075 aa22.16■■□□□ 1.14
PKD1-223ENST00000561668 SPDYE16A6NNV3 312 aaPredicted RBP22.16■■□□□ 1.14
PKD1-223ENST00000561668 KIAA1755Q5JYT7 1200 aa22.16■■□□□ 1.14
PKD1-223ENST00000561668 PLEKHH3Q7Z736 793 aa22.16■■□□□ 1.14
PKD1-223ENST00000561668 MB21D1Q8N884 522 aa22.16■■□□□ 1.14
PKD1-223ENST00000561668 NEDD1Q8NHV4 660 aa22.16■■□□□ 1.14
PKD1-223ENST00000561668 DSCC1Q9BVC3 393 aa22.16■■□□□ 1.14
PKD1-223ENST00000561668 IL25Q9H293 177 aa22.16■■□□□ 1.14
PKD1-223ENST00000561668 IVNS1ABPQ9Y6Y0 642 aa22.16■■□□□ 1.14
PKD1-223ENST00000561668 TSPY2A6NKD2 308 aa22.15■■□□□ 1.14
PKD1-223ENST00000561668 TTLL1O95922 423 aa22.15■■□□□ 1.14
PKD1-223ENST00000561668 ELNP15502 786 aa22.15■■□□□ 1.14
PKD1-223ENST00000561668 DSG3P32926 999 aa22.15■■□□□ 1.14
PKD1-223ENST00000561668 FAM47AQ5JRC9 791 aa22.15■■□□□ 1.14
PKD1-223ENST00000561668 SOCS4Q8WXH5 440 aa22.15■■□□□ 1.14
PKD1-223ENST00000561668 RNF208Q9H0X6 261 aa22.15■■□□□ 1.14
PKD1-223ENST00000561668 TOMM22Q9NS69 142 aa22.15■■□□□ 1.14
PKD1-223ENST00000561668 MTMR4Q9NYA4 1195 aa22.15■■□□□ 1.14
PKD1-223ENST00000561668 GJD2Q9UKL4 321 aa22.15■■□□□ 1.14
PKD1-223ENST00000561668 F5H6K3 240 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 RANBP6O60518 1105 aaKnown RBP22.14■■□□□ 1.13
PKD1-223ENST00000561668 EN2P19622 333 aaPredicted RBP22.14■■□□□ 1.13
PKD1-223ENST00000561668 CYP2B6P20813 491 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 KLRC3Q07444 240 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 PLS1Q14651 629 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 GPR142Q7Z601 462 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 NKX2-3Q8TAU0 364 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 RUFY2Q8WXA3 655 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 MKL1Q969V6 931 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 CEP95Q96GE4 821 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 PORCNQ9H237 461 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 BTBD7Q9P203 1132 aa22.14■■□□□ 1.13
PKD1-223ENST00000561668 GREB1LQ9C091 1923 aaPredicted RBP22.14■■□□□ 1.13
PKD1-223ENST00000561668 SGSM2O43147 1006 aa22.13■■□□□ 1.13
PKD1-223ENST00000561668 CNMDO75829 334 aa22.13■■□□□ 1.13
PKD1-223ENST00000561668 CCL5P13501 91 aa22.13■■□□□ 1.13
PKD1-223ENST00000561668 MTFR1Q15390 333 aa22.13■■□□□ 1.13
PKD1-223ENST00000561668 TRMT44Q8IYL2 757 aaKnown RBP22.13■■□□□ 1.13
PKD1-223ENST00000561668 SYNPO2Q9UMS6 1093 aa22.13■■□□□ 1.13
PKD1-223ENST00000561668 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.13■■□□□ 1.13
PKD1-223ENST00000561668 IGKV6D-41A0A0C4DH26 115 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms