RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZHX2Q9Y6X8 837 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 DOCK3Q8IZD9 2030 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 PLIN1O60240 522 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 ADH1CP00326 375 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 IGFBP4P22692 258 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 RFC5P40937 340 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 CACNB2Q08289 660 aaPredicted RBP6.78□□□□□ -1.32
HERC1-213ENST00000561359 LMOD3Q0VAK6 560 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 NOL9Q5SY16 702 aaKnown RBP6.78□□□□□ -1.32
HERC1-213ENST00000561359 MAP3K21Q5TCX8 1036 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 PNMA1Q8ND90 353 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 GPKOWQ92917 476 aaPredicted RBP eCLIP6.78□□□□□ -1.32
HERC1-213ENST00000561359 TEKT1Q969V4 418 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 METTL22Q9BUU2 404 aaPredicted RBP6.78□□□□□ -1.32
HERC1-213ENST00000561359 PHAXQ9H814 394 aaKnown RBP6.78□□□□□ -1.32
HERC1-213ENST00000561359 SENP2Q9HC62 589 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 PICK1Q9NRD5 415 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 ZNF112Q9UJU3 913 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 GJD2Q9UKL4 321 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 MGAMO43451 1857 aa6.78□□□□□ -1.32
HERC1-213ENST00000561359 XIRP2A4UGR9 3374 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 FAM86C2PA6NEL3 165 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 TRIM75PA6NK02 468 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 CHL1O00533 1208 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 DDX58O95786 925 aaKnown RBP6.77□□□□□ -1.33
HERC1-213ENST00000561359 ZKSCAN1P17029 563 aaPredicted RBP6.77□□□□□ -1.33
HERC1-213ENST00000561359 CCND3P30281 292 aaPredicted RBP6.77□□□□□ -1.33
HERC1-213ENST00000561359 TCP10Q12799 353 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 C4orf48Q5BLP8 95 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 FKBP1CQ5VVH2 108 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 DUSP27Q5VZP5 1158 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 UBE3BQ7Z3V4 1068 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 ZNF775Q96BV0 537 aaPredicted RBP6.77□□□□□ -1.33
HERC1-213ENST00000561359 TIFAQ96CG3 184 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 ARHGAP9Q9BRR9 750 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 PRDM12Q9H4Q4 367 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 FKBPLQ9UIM3 349 aa6.77□□□□□ -1.33
HERC1-213ENST00000561359 DLG5Q8TDM6 1919 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 ANKRD18BA2A2Z9 1011 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 FRAT2O75474 233 aaPredicted RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 BMP1P13497 986 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 PTPRAP18433 802 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 HIBADHP31937 336 aaKnown RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 GCLCP48506 637 aaPredicted RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 WDR4P57081 412 aaKnown RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 HDLBPQ00341 1268 aaKnown RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 NEXNQ0ZGT2 675 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 CHAF1AQ13111 956 aaPredicted RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 GRIK5Q16478 980 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 AAK1Q2M2I8 961 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 VASH1Q7L8A9 365 aaPredicted RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 SH3BP5LQ7L8J4 393 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 TRMT44Q8IYL2 757 aaKnown RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 TDRD7Q8NHU6 1098 aaKnown RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 ZDHHC15Q96MV8 337 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 CDK15Q96Q40 435 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 AGTPBP1Q9UPW5 1226 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 MAP3K2Q9Y2U5 619 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 AFG3L2Q9Y4W6 797 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 RPAP1Q9BWH6 1393 aaPredicted RBP6.76□□□□□ -1.33
HERC1-213ENST00000561359 ARAP2Q8WZ64 1704 aa6.76□□□□□ -1.33
HERC1-213ENST00000561359 SMIM22K7EJ46 135 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 GPR37L1O60883 481 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 IGKV5-2P06315 115 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 XRCC5P13010 732 aaKnown RBP6.75□□□□□ -1.33
HERC1-213ENST00000561359 GYG1P46976 350 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 TFF2Q03403 129 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 CWF19L2Q2TBE0 894 aaKnown RBP6.75□□□□□ -1.33
HERC1-213ENST00000561359 TMEM259Q4ZIN3 620 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 TREML2Q5T2D2 321 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 APOBEC3HQ6NTF7 200 aaKnown RBP6.75□□□□□ -1.33
HERC1-213ENST00000561359 PDXDC2PQ6P474 469 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 CCDC129Q6ZRS4 1044 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 ZBTB33Q86T24 672 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 SCYL3Q8IZE3 742 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 MICALL1Q8N3F8 863 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 FAM151AQ8WW52 585 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 SOCS4Q8WXH5 440 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 KIFC2Q96AC6 838 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 CXXC1Q9P0U4 656 aaPredicted RBP6.75□□□□□ -1.33
HERC1-213ENST00000561359 IQSEC3Q9UPP2 1182 aaPredicted RBP6.75□□□□□ -1.33
HERC1-213ENST00000561359 CHMP3Q9Y3E7 222 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 SPEF2Q9C093 1822 aa6.75□□□□□ -1.33
HERC1-213ENST00000561359 CACNA1GO43497 2377 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 ZDBF2Q9HCK1 2354 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 TRIM43BA6NCK2 446 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 H7C1W4 665 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 FSHRP23945 695 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 CNGA1P29973 690 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 TMPOP42166 694 aaKnown RBP6.74□□□□□ -1.33
HERC1-213ENST00000561359 KCNQ1P51787 676 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 NR5A1Q13285 461 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 IFIT5Q13325 482 aaKnown RBP6.74□□□□□ -1.33
HERC1-213ENST00000561359 ADGRE1Q14246 886 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 CCL14Q16627 93 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 TRIM60Q495X7 471 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 TAF7LQ5H9L4 462 aa6.74□□□□□ -1.33
HERC1-213ENST00000561359 SH3RF1Q7Z6J0 888 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms