RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 PNMA3Q9UL41 463 aa18.38■□□□□ 0.53
RABGGTA-219ENST00000560871 NEDD4P46934 1319 aa18.38■□□□□ 0.53
RABGGTA-219ENST00000560871 HTTP42858 3142 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 ZNF213O14771 459 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 CDC45O75419 566 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 FMNL1O95466 1100 aaPredicted RBP18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 TSPY3P0CV98 308 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 TSPY8P0CW00 308 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 PCP11498 1178 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 HOXD10P28358 340 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 TFAP4Q01664 338 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 PABPC4Q13310 644 aaKnown RBP eCLIP18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 SLC9C1Q4G0N8 1177 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 KIAA1755Q5JYT7 1200 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 AKNAD1Q5T1N1 836 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 NBPF11Q86T75 865 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 NKX2-3Q8TAU0 364 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 CEP95Q96GE4 821 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 ZNF333Q96JL9 665 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 ASCC2Q9H1I8 757 aaPredicted RBP18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 SH2D4AQ9H788 454 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 VCPKMTQ9H867 229 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 NYAP2Q9P242 653 aa18.37■□□□□ 0.53
RABGGTA-219ENST00000560871 POTEFA5A3E0 1075 aa18.36■□□□□ 0.53
RABGGTA-219ENST00000560871 FCGRTP55899 365 aa18.36■□□□□ 0.53
RABGGTA-219ENST00000560871 IMMTQ16891 758 aaKnown RBP18.36■□□□□ 0.53
RABGGTA-219ENST00000560871 SMCR8Q8TEV9 937 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-219ENST00000560871 MAP4K1Q92918 833 aa18.36■□□□□ 0.53
RABGGTA-219ENST00000560871 LSG1Q9H089 658 aaKnown RBP18.36■□□□□ 0.53
RABGGTA-219ENST00000560871 MTMR4Q9NYA4 1195 aa18.36■□□□□ 0.53
RABGGTA-219ENST00000560871 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
RABGGTA-219ENST00000560871 TSPY2A6NKD2 308 aa18.35■□□□□ 0.53
RABGGTA-219ENST00000560871 NOVP48745 357 aa18.35■□□□□ 0.53
RABGGTA-219ENST00000560871 LPAR1Q92633 364 aa18.35■□□□□ 0.53
RABGGTA-219ENST00000560871 RNF41Q9H4P4 317 aaPredicted RBP18.35■□□□□ 0.53
RABGGTA-219ENST00000560871 IL17RBQ9NRM6 502 aa18.35■□□□□ 0.53
RABGGTA-219ENST00000560871 A0A0G2JMZ2 1700 aa18.35■□□□□ 0.53
RABGGTA-219ENST00000560871 MYPNQ86TC9 1320 aa18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 CYP21A2P08686 494 aa18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 GCLCP48506 637 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 ATP2B2Q01814 1243 aa18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 MFSD6Q6ZSS7 791 aa18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 ANKRD13CQ8N6S4 541 aa18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 SH3TC2Q8TF17 1288 aa18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 MKL1Q969V6 931 aa18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 RPAP3Q9H6T3 665 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 SYNPO2Q9UMS6 1093 aa18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-219ENST00000560871 DOCK3Q8IZD9 2030 aa18.33■□□□□ 0.53
RABGGTA-219ENST00000560871 USP17L15C9J2P7 530 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 USP17L13C9JLJ4 530 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 USP17L11C9JVI0 530 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 USP17L18D6R9N7 530 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 USP17L22D6RA61 530 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 USP17L17D6RBQ6 530 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 USP17L19D6RCP7 530 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 USP17L20D6RJB6 530 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 RANBP6O60518 1105 aaKnown RBP18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 TTLL1O95922 423 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 NT5C2P49902 561 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 HERVK_113P62684 666 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 USP17L24Q0WX57 530 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 FAM110CQ1W6H9 321 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 RRP12Q5JTH9 1297 aaKnown RBP18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 CATSPERGQ6ZRH7 1159 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 TMEM106CQ9BVX2 250 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 RBM8AQ9Y5S9 174 aaKnown RBP18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 MYH4Q9Y623 1939 aa18.33■□□□□ 0.52
RABGGTA-219ENST00000560871 RLFQ13129 1914 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 WDR46O15213 610 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 NMT2O60551 498 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 PRKCZQ05513 592 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 POTEEQ6S8J3 1075 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 SPICE1Q8N0Z3 855 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 RAET1EQ8TD07 263 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 P2RX7Q99572 595 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 TOMM22Q9NS69 142 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 TCP11L1Q9NUJ3 509 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 CLIP2Q9UDT6 1046 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 GABRQQ9UN88 632 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 TAF6LQ9Y6J9 622 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 PARP14Q460N5 1801 aa18.32■□□□□ 0.52
RABGGTA-219ENST00000560871 EN2P19622 333 aaPredicted RBP18.31■□□□□ 0.52
RABGGTA-219ENST00000560871 GRK4P32298 578 aa18.31■□□□□ 0.52
RABGGTA-219ENST00000560871 CASC1Q6TDU7 716 aa18.31■□□□□ 0.52
RABGGTA-219ENST00000560871 LBX2Q6XYB7 198 aa18.31■□□□□ 0.52
RABGGTA-219ENST00000560871 LRRC47Q8N1G4 583 aaKnown RBP18.31■□□□□ 0.52
RABGGTA-219ENST00000560871 ESR2Q92731 530 aa18.31■□□□□ 0.52
RABGGTA-219ENST00000560871 ANO2Q9NQ90 1003 aa18.31■□□□□ 0.52
RABGGTA-219ENST00000560871 MORF4L1Q9UBU8 362 aa18.31■□□□□ 0.52
RABGGTA-219ENST00000560871 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
RABGGTA-219ENST00000560871 SPDYE16A6NNV3 312 aaPredicted RBP18.3■□□□□ 0.52
RABGGTA-219ENST00000560871 F5H6K3 240 aa18.3■□□□□ 0.52
RABGGTA-219ENST00000560871 NDUFB10O96000 172 aa18.3■□□□□ 0.52
RABGGTA-219ENST00000560871 KLRC3Q07444 240 aa18.3■□□□□ 0.52
RABGGTA-219ENST00000560871 PPP4R3BQ5MIZ7 849 aa18.3■□□□□ 0.52
RABGGTA-219ENST00000560871 GMCL1P1Q8NEA9 526 aa18.3■□□□□ 0.52
RABGGTA-219ENST00000560871 STX8Q9UNK0 236 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms