RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 ZNF713Q8N859 430 aaPredicted RBP13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 FOXD4L4Q8WXT5 416 aaPredicted RBP13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 MKL1Q969V6 931 aa13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 SPZ1Q9BXG8 430 aa13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 BRMS1Q9HCU9 246 aa13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 SH3GLB2Q9NR46 395 aa13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 RNF181Q9P0P0 153 aa13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 SIPA1L1O43166 1804 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 ELP1O95163 1332 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 PITPNM2Q9BZ72 1349 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 MYH8P13535 1937 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 SNHG28P0DPA3 235 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 ICA1Q05084 483 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 GSE1Q14687 1217 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 KLHL40Q2TBA0 621 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 DCAF15Q66K64 600 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 DCAF4Q8WV16 495 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 SH2D4AQ9H788 454 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 MAD2L2Q9UI95 211 aa13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 DDX49Q9Y6V7 483 aaKnown RBP13.69□□□□□ -0.22
AC087878.1-201ENST00000560709 PRPF40AO75400 957 aaKnown RBP13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 PDHBP11177 359 aa13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 YBX3P16989 372 aaKnown RBP eCLIP13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 GNL2Q13823 731 aaKnown RBP13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 RASA3Q14644 834 aa13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 KRT40Q6A162 431 aa13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 DPY19L2Q6NUT2 758 aa13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 SRBD1Q8N5C6 995 aaKnown RBP13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 GMCL1P1Q8NEA9 526 aa13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 CCDC12Q8WUD4 166 aaPredicted RBP13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 FOXP1Q9H334 677 aaPredicted RBP13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 ARHGEF10LQ9HCE6 1279 aa13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
AC087878.1-201ENST00000560709 PLEKHA8P1O95397 391 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 MMP1P03956 469 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 SCG2P13521 617 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 CALML3P27482 149 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 KIF23Q02241 960 aaPredicted RBP13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 PFKFB3Q16875 520 aaPredicted RBP13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 TBC1D10BQ4KMP7 808 aaPredicted RBP13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 C9orf131Q5VYM1 1079 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 GALNT17Q6IS24 598 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 FERMT3Q86UX7 667 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 TMEM39BQ9GZU3 492 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 ADARB2Q9NS39 739 aaKnown RBP13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 LMBRD1Q9NUN5 540 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 PGAP2Q9UHJ9 254 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 HACL1Q9UJ83 578 aa13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 ISY1Q9ULR0 285 aaKnown RBP13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
AC087878.1-201ENST00000560709 SBF1O95248 1867 aa13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 KLRF2D3W0D1 207 aa13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 ASNSP08243 561 aa13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 U2AF2P26368 475 aaKnown RBP eCLIP13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 UBE2HP62256 183 aa13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 DNM1Q05193 864 aaKnown RBP13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 PKN1Q16512 942 aa13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 SAMD7Q7Z3H4 446 aa13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 SEC63Q9UGP8 760 aaKnown RBP13.66□□□□□ -0.22
AC087878.1-201ENST00000560709 FIBPO43427 364 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 GH2P01242 217 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 EEF2P13639 858 aaKnown RBP13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 CAP2P40123 477 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 ZNF543Q08ER8 600 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 GPR162Q16538 588 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 LRRC47Q8N1G4 583 aaKnown RBP13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 CCDC82Q8N4S0 544 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 RRP36Q96EU6 259 aaKnown RBP13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 TEPSINQ96N21 525 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 DEFB129Q9H1M3 183 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 RIOX1Q9H6W3 641 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 ZBTB21Q9ULJ3 1066 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 CNPY2Q9Y2B0 182 aa13.65□□□□□ -0.22
AC087878.1-201ENST00000560709 SHTN1A0MZ66 631 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 FAM196BA6NMK8 535 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 GDF11O95390 407 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 YEATS4O95619 227 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 GUCY1A2P33402 732 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 KRT2P35908 639 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 FOSBP53539 338 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 ATP2B2Q01814 1243 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 GUCY1B3Q02153 619 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 SEPT2Q15019 361 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 RILPL1Q5EBL4 403 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 MYSM1Q5VVJ2 828 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 USP48Q86UV5 1035 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 DIS3L2Q8IYB7 885 aaKnown RBP13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 STAG2Q8N3U4 1231 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 SPATA32Q96LK8 384 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 PHF20Q9BVI0 1012 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 ZNF341Q9BYN7 854 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 GOPCQ9HD26 462 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
AC087878.1-201ENST00000560709 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
AC087878.1-201ENST00000560709 USP17L5A8MUK1 530 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms