RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 HAUS7Q99871 368 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 MROH5Q6ZUA9 1318 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 DDX39AO00148 427 aaKnown RBP13.99□□□□□ -0.17
SYNM-203ENST00000560674 GIPC1O14908 333 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 RGS16O15492 202 aaPredicted RBP13.99□□□□□ -0.17
SYNM-203ENST00000560674 ZNF274Q96GC6 653 aaPredicted RBP13.99□□□□□ -0.17
SYNM-203ENST00000560674 LSM14BQ9BX40 385 aaKnown RBP13.99□□□□□ -0.17
SYNM-203ENST00000560674 NT5C3AQ9H0P0 336 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 VPS37BQ9H9H4 285 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 PSMD6Q15008 389 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 TRAPPC3LQ5T215 181 aa13.99□□□□□ -0.17
SYNM-203ENST00000560674 RNF10Q8N5U6 811 aaKnown RBP13.99□□□□□ -0.17
SYNM-203ENST00000560674 GOLGA8KD6RF30 607 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 TAF5LO75529 589 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 TBC1D8O95759 1140 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 RASSF2P50749 326 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 GGA1Q9UJY5 639 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 HYOU1Q9Y4L1 999 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 NR1I2O75469 434 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 MYCLP12524 364 aaPredicted RBP13.98□□□□□ -0.17
SYNM-203ENST00000560674 GNGT1P63211 74 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 REXO1Q8N1G1 1221 aaKnown RBP13.98□□□□□ -0.17
SYNM-203ENST00000560674 BAIAP2L1Q9UHR4 511 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 PPP2R2CQ9Y2T4 447 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 STX2P32856 288 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 GUCY2FP51841 1108 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 MORC3Q14149 939 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 C8orf37Q96NL8 207 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 EFCAB8A8MWE9 144 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 CCDC89Q8N998 374 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 P3H4Q92791 437 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 C19orf44Q9H6X5 657 aa13.98□□□□□ -0.17
SYNM-203ENST00000560674 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 CLGNO14967 610 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 ARHGAP44Q17R89 818 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 PROCA1Q8NCQ7 364 aaPredicted RBP13.97□□□□□ -0.17
SYNM-203ENST00000560674 ANKRD42Q8N9B4 389 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 MGARPQ8TDB4 240 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 U2AF1L4Q8WU68 220 aaKnown RBP13.97□□□□□ -0.17
SYNM-203ENST00000560674 DESI2Q9BSY9 194 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 KDM3AQ9Y4C1 1321 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 SF3A3Q12874 501 aaKnown RBP eCLIP13.97□□□□□ -0.17
SYNM-203ENST00000560674 PPP2R5DQ14738 602 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 CASC4Q6P4E1 433 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 SRGAP1Q7Z6B7 1085 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 PLEKHA4Q9H4M7 779 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 BLMP54132 1417 aaPredicted RBP13.97□□□□□ -0.17
SYNM-203ENST00000560674 TXNDC9O14530 226 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 CD19P15391 556 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 NOSTRINQ8IVI9 506 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 LGR6Q9HBX8 967 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 PICK1Q9NRD5 415 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 TMOD4Q9NZQ9 345 aa13.97□□□□□ -0.17
SYNM-203ENST00000560674 NUP153P49790 1475 aaKnown RBP13.97□□□□□ -0.17
SYNM-203ENST00000560674 INSRP06213 1382 aa13.96□□□□□ -0.17
SYNM-203ENST00000560674 TROVE2P10155 538 aaKnown RBP eCLIP13.96□□□□□ -0.17
SYNM-203ENST00000560674 ZNF654Q8IZM8 581 aa13.96□□□□□ -0.17
SYNM-203ENST00000560674 MRFAP1L1Q96HT8 127 aa13.96□□□□□ -0.17
SYNM-203ENST00000560674 USP28Q96RU2 1077 aa13.96□□□□□ -0.17
SYNM-203ENST00000560674 STAT1P42224 750 aa13.96□□□□□ -0.17
SYNM-203ENST00000560674 LRRC8AQ8IWT6 810 aa13.96□□□□□ -0.17
SYNM-203ENST00000560674 TFAP4Q01664 338 aa13.96□□□□□ -0.17
SYNM-203ENST00000560674 PPARAQ07869 468 aa13.96□□□□□ -0.17
SYNM-203ENST00000560674 USH1GQ495M9 461 aa13.96□□□□□ -0.17
SYNM-203ENST00000560674 TRIML1Q8N9V2 468 aa13.96□□□□□ -0.17
SYNM-203ENST00000560674 GSPT1P15170 499 aaKnown RBP13.96□□□□□ -0.18
SYNM-203ENST00000560674 DNM2P50570 870 aa13.96□□□□□ -0.18
SYNM-203ENST00000560674 PPP2R5EQ16537 467 aa13.96□□□□□ -0.18
SYNM-203ENST00000560674 TRAPPC8Q9Y2L5 1435 aa13.96□□□□□ -0.18
SYNM-203ENST00000560674 ZNF608Q9ULD9 1512 aaPredicted RBP13.96□□□□□ -0.18
SYNM-203ENST00000560674 NOP56O00567 594 aaKnown RBP13.96□□□□□ -0.18
SYNM-203ENST00000560674 KCNK3O14649 394 aa13.96□□□□□ -0.18
SYNM-203ENST00000560674 XRCC5P13010 732 aaKnown RBP13.96□□□□□ -0.18
SYNM-203ENST00000560674 ETF1P62495 437 aaKnown RBP13.96□□□□□ -0.18
SYNM-203ENST00000560674 MTMR6Q9Y217 621 aa13.96□□□□□ -0.18
SYNM-203ENST00000560674 KRIT1O00522 736 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 PFKFB2O60825 505 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 SARNPP82979 210 aaKnown RBP13.95□□□□□ -0.18
SYNM-203ENST00000560674 MYOCDQ8IZQ8 938 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 RILPQ96NA2 401 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 FAM114A2Q9NRY5 505 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 HOMER3Q9NSC5 361 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 ZNF215Q9UL58 517 aaPredicted RBP13.95□□□□□ -0.18
SYNM-203ENST00000560674 CAPN7Q9Y6W3 813 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 KIAA0232Q92628 1395 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 CMA1P23946 247 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 LRMPQ12912 555 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 ZYXQ15942 572 aaKnown RBP13.95□□□□□ -0.18
SYNM-203ENST00000560674 SPATS2Q86XZ4 545 aaKnown RBP13.95□□□□□ -0.18
SYNM-203ENST00000560674 CCDC125Q86Z20 511 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 TSC1Q92574 1164 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 ATP2A3Q93084 1043 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 RAB3IPQ96QF0 476 aaPredicted RBP13.95□□□□□ -0.18
SYNM-203ENST00000560674 STK38LQ9Y2H1 464 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 A1BGP04217 495 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 UIMC1Q96RL1 719 aa13.95□□□□□ -0.18
SYNM-203ENST00000560674 KLHL14Q9P2G3 628 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms