RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 TREHO43280 583 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 CCP110O43303 1012 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 FIBPO43427 364 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 SLC26A4O43511 780 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 PRPF40AO75400 957 aaKnown RBP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 LGR5O75473 907 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 LETM1O95202 739 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 BPNT1O95861 308 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 EGFRP00533 1210 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 TGFB1P01137 390 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 CCDC172P0C7W6 258 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 PAX7P23759 505 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 GRNP28799 593 aaKnown RBP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 SOX18P35713 384 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 TSPAN7P41732 249 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 EPHB1P54762 984 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 SIM2Q14190 667 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 SMC1AQ14683 1233 aaKnown RBP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 ACBD5Q5T8D3 534 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 ZNF654Q8IZM8 581 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 CPXCR1Q8N123 301 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 AGGF1Q8N302 714 aaeCLIP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 TEX9Q8N6V9 391 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 UTP4Q969X6 686 aaKnown RBP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 RMDN2Q96LZ7 410 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 RBCK1Q9BYM8 510 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 GTPBP4Q9BZE4 634 aaKnown RBP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 KANSL2Q9H9L4 492 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 HDAC9Q9UKV0 1011 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 OAS3Q9Y6K5 1087 aaKnown RBP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 MMP20O60882 483 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 WNT11O96014 354 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 IGHDP01880 384 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 TPM3P06753 285 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 ATF4P18848 351 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 GEMIN4P57678 1058 aaKnown RBP5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 SARNPP82979 210 aaKnown RBP5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 NFIAQ12857 509 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 EIF2B5Q13144 721 aaKnown RBP5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 LONRF1Q17RB8 773 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 PARP10Q53GL7 1025 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 Q6ZS46 218 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 ACAD11Q709F0 780 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 CCDC144CPQ8IYA2 1237 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 CKAP2LQ8IYA6 745 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 IFNL2Q8IZJ0 200 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 GIMAP1Q8WWP7 306 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 BORCS6Q96GS4 357 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 MYO19Q96H55 970 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 SELENOOQ9BVL4 669 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 FANCLQ9NW38 375 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 PCSK1NQ9UHG2 260 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 SLC45A1Q9Y2W3 748 aa5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 MRPS23Q9Y3D9 190 aaKnown RBP5.29□□□□□ -1.56
HMGB3P26-201ENST00000560051 IL16Q14005 1332 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 WASHC2AQ641Q2 1341 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 WASHC2CQ9Y4E1 1318 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 SART1O43290 800 aaKnown RBP5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 TSPAN6O43657 245 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 CDC45O75419 566 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 SMNDC1O75940 238 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 KIAA0754O94854 1291 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 IDEP14735 1019 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 RRM1P23921 792 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 KIF5BP33176 963 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 CD68P34810 354 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 STK3Q13188 491 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 DSC3Q14574 896 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 E2F5Q15329 346 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 BRDTQ58F21 947 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 C10orf62Q5T681 223 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 TREML1Q86YW5 311 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 ERC1Q8IUD2 1116 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 KIAA0825Q8IV33 1275 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 SAMD14Q8IZD0 417 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 CCAR2Q8N163 923 aaKnown RBP5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 MYO1HQ8N1T3 1032 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 TEKT1Q969V4 418 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 SPAG5Q96R06 1193 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 SRPK1Q96SB4 655 aaKnown RBP5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 SETDB2Q96T68 719 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 XPO4Q9C0E2 1151 aaKnown RBP5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 DCAF16Q9NXF7 216 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 CNTN3Q9P232 1028 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 SEL1LQ9UBV2 794 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 USP25Q9UHP3 1055 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 USP20Q9Y2K6 914 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 PAXBP1Q9Y5B6 917 aa5.28□□□□□ -1.56
HMGB3P26-201ENST00000560051 LINC01387J3KSC0 135 aa5.27□□□□□ -1.57
HMGB3P26-201ENST00000560051 OPLAHO14841 1288 aa5.27□□□□□ -1.57
HMGB3P26-201ENST00000560051 E2F6O75461 281 aa5.27□□□□□ -1.57
HMGB3P26-201ENST00000560051 MED26O95402 600 aa5.27□□□□□ -1.57
HMGB3P26-201ENST00000560051 BAG2O95816 211 aa5.27□□□□□ -1.57
HMGB3P26-201ENST00000560051 HCLS1P14317 486 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P26-201ENST00000560051 MAGEA8P43361 318 aa5.27□□□□□ -1.57
HMGB3P26-201ENST00000560051 MAPK8P45983 427 aa5.27□□□□□ -1.57
HMGB3P26-201ENST00000560051 MASP1P48740 699 aa5.27□□□□□ -1.57
HMGB3P26-201ENST00000560051 PPM1FP49593 454 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms