RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TRIB2Q92519 343 aa20.41■□□□□ 0.86
LRRC28-210ENST00000558879 USP6NLQ92738 828 aa20.41■□□□□ 0.86
LRRC28-210ENST00000558879 TMX2Q9Y320 296 aa20.41■□□□□ 0.86
LRRC28-210ENST00000558879 LRRFIP1Q32MZ4 808 aaKnown RBP20.4■□□□□ 0.86
LRRC28-210ENST00000558879 GPR142Q7Z601 462 aa20.4■□□□□ 0.86
LRRC28-210ENST00000558879 NUDT12Q9BQG2 462 aa20.4■□□□□ 0.86
LRRC28-210ENST00000558879 ARHGEF10LQ9HCE6 1279 aa20.4■□□□□ 0.86
LRRC28-210ENST00000558879 BTBD7Q9P203 1132 aa20.4■□□□□ 0.86
LRRC28-210ENST00000558879 CEP290O15078 2479 aa20.39■□□□□ 0.86
LRRC28-210ENST00000558879 XRCC5P13010 732 aaKnown RBP20.39■□□□□ 0.85
LRRC28-210ENST00000558879 GNAT2P19087 354 aa20.39■□□□□ 0.85
LRRC28-210ENST00000558879 MORN1Q5T089 497 aa20.39■□□□□ 0.85
LRRC28-210ENST00000558879 LPAR1Q92633 364 aa20.39■□□□□ 0.85
LRRC28-210ENST00000558879 VCPKMTQ9H867 229 aa20.39■□□□□ 0.85
LRRC28-210ENST00000558879 STAP2Q9UGK3 403 aa20.39■□□□□ 0.85
LRRC28-210ENST00000558879 SGPL1O95470 568 aa20.38■□□□□ 0.85
LRRC28-210ENST00000558879 CAPN2P17655 700 aa20.38■□□□□ 0.85
LRRC28-210ENST00000558879 RASA1P20936 1047 aa20.38■□□□□ 0.85
LRRC28-210ENST00000558879 ZMYM1Q5SVZ6 1142 aa20.38■□□□□ 0.85
LRRC28-210ENST00000558879 MAP3K21Q5TCX8 1036 aa20.38■□□□□ 0.85
LRRC28-210ENST00000558879 ANKRD45Q5TZF3 282 aa20.38■□□□□ 0.85
LRRC28-210ENST00000558879 FSD1Q9BTV5 496 aa20.38■□□□□ 0.85
LRRC28-210ENST00000558879 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.38■□□□□ 0.85
LRRC28-210ENST00000558879 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.38■□□□□ 0.85
LRRC28-210ENST00000558879 SH2D4AQ9H788 454 aa20.38■□□□□ 0.85
LRRC28-210ENST00000558879 CCNA1P78396 465 aa20.37■□□□□ 0.85
LRRC28-210ENST00000558879 TRIM32Q13049 653 aa20.37■□□□□ 0.85
LRRC28-210ENST00000558879 PLEKHH3Q7Z736 793 aa20.37■□□□□ 0.85
LRRC28-210ENST00000558879 SEC62Q99442 399 aaKnown RBP20.37■□□□□ 0.85
LRRC28-210ENST00000558879 APBA2Q99767 749 aa20.37■□□□□ 0.85
LRRC28-210ENST00000558879 CRISPLD2Q9H0B8 497 aa20.37■□□□□ 0.85
LRRC28-210ENST00000558879 PLIN4Q96Q06 1357 aa20.36■□□□□ 0.85
LRRC28-210ENST00000558879 WDR46O15213 610 aaKnown RBP20.36■□□□□ 0.85
LRRC28-210ENST00000558879 CYP2B6P20813 491 aa20.36■□□□□ 0.85
LRRC28-210ENST00000558879 COG2Q14746 738 aa20.36■□□□□ 0.85
LRRC28-210ENST00000558879 SMC5Q8IY18 1101 aa20.36■□□□□ 0.85
LRRC28-210ENST00000558879 TANGO6Q9C0B7 1094 aa20.36■□□□□ 0.85
LRRC28-210ENST00000558879 KANSL2Q9H9L4 492 aa20.36■□□□□ 0.85
LRRC28-210ENST00000558879 RPTORQ8N122 1335 aa20.35■□□□□ 0.85
LRRC28-210ENST00000558879 FOXP2O15409 715 aa20.35■□□□□ 0.85
LRRC28-210ENST00000558879 EEF2P13639 858 aaKnown RBP20.35■□□□□ 0.85
LRRC28-210ENST00000558879 RGS2P41220 211 aa20.35■□□□□ 0.85
LRRC28-210ENST00000558879 PDE1AP54750 535 aa20.35■□□□□ 0.85
LRRC28-210ENST00000558879 TRMT44Q8IYL2 757 aaKnown RBP20.35■□□□□ 0.85
LRRC28-210ENST00000558879 IFNL3Q8IZI9 196 aa20.35■□□□□ 0.85
LRRC28-210ENST00000558879 DEFB118Q96PH6 123 aa20.35■□□□□ 0.85
LRRC28-210ENST00000558879 PATL2C9JE40 543 aaKnown RBP20.34■□□□□ 0.85
LRRC28-210ENST00000558879 FARP2O94887 1054 aaPredicted RBP20.34■□□□□ 0.85
LRRC28-210ENST00000558879 DSG3P32926 999 aa20.34■□□□□ 0.85
LRRC28-210ENST00000558879 TDO2P48775 406 aa20.34■□□□□ 0.85
LRRC28-210ENST00000558879 MAP2K5Q13163 448 aa20.34■□□□□ 0.85
LRRC28-210ENST00000558879 GRB14Q14449 540 aa20.34■□□□□ 0.85
LRRC28-210ENST00000558879 SPICE1Q8N0Z3 855 aa20.34■□□□□ 0.85
LRRC28-210ENST00000558879 IGKV6D-41A0A0C4DH26 115 aa20.33■□□□□ 0.85
LRRC28-210ENST00000558879 MINDY4BA8MYZ0 360 aa20.33■□□□□ 0.85
LRRC28-210ENST00000558879 PTPREP23469 700 aa20.33■□□□□ 0.85
LRRC28-210ENST00000558879 CCAR1Q8IX12 1150 aaKnown RBP20.33■□□□□ 0.85
LRRC28-210ENST00000558879 MB21D1Q8N884 522 aa20.33■□□□□ 0.85
LRRC28-210ENST00000558879 HMX1Q9NP08 348 aaPredicted RBP20.33■□□□□ 0.85
LRRC28-210ENST00000558879 HOXC10Q9NYD6 342 aa20.33■□□□□ 0.85
LRRC28-210ENST00000558879 ZBTB47Q9UFB7 747 aaPredicted RBP20.33■□□□□ 0.85
LRRC28-210ENST00000558879 SLC15A5A6NIM6 579 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 SLC34A2O95436 690 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 HOXC6P09630 235 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
LRRC28-210ENST00000558879 CCL14Q16627 93 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 SHCBP1Q8NEM2 672 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 EVI5LQ96CN4 794 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 ATG4CQ96DT6 458 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 MOV10L1Q9BXT6 1211 aaKnown RBP20.32■□□□□ 0.84
LRRC28-210ENST00000558879 SPATC1LQ9H0A9 340 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 NYAP2Q9P242 653 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 ADAMTS5Q9UNA0 930 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 MCM3APO60318 1980 aa20.32■□□□□ 0.84
LRRC28-210ENST00000558879 FLOT1O75955 427 aa20.31■□□□□ 0.84
LRRC28-210ENST00000558879 PRKAR2AP13861 404 aaKnown RBP20.31■□□□□ 0.84
LRRC28-210ENST00000558879 EXOC6Q8TAG9 804 aa20.31■□□□□ 0.84
LRRC28-210ENST00000558879 NACAP1Q9BZK3 213 aa20.31■□□□□ 0.84
LRRC28-210ENST00000558879 MKNK2Q9HBH9 465 aa20.31■□□□□ 0.84
LRRC28-210ENST00000558879 GOPCQ9HD26 462 aa20.31■□□□□ 0.84
LRRC28-210ENST00000558879 IGHA2P01877 340 aa20.3■□□□□ 0.84
LRRC28-210ENST00000558879 CACNB2Q08289 660 aaPredicted RBP20.3■□□□□ 0.84
LRRC28-210ENST00000558879 CCDC129Q6ZRS4 1044 aa20.3■□□□□ 0.84
LRRC28-210ENST00000558879 TICAM2Q86XR7 235 aa20.3■□□□□ 0.84
LRRC28-210ENST00000558879 STK11IPQ8N1F8 1099 aa20.3■□□□□ 0.84
LRRC28-210ENST00000558879 ANKLE1Q8NAG6 615 aa20.3■□□□□ 0.84
LRRC28-210ENST00000558879 LNPKQ9C0E8 428 aa20.3■□□□□ 0.84
LRRC28-210ENST00000558879 NAPBQ9H115 298 aa20.3■□□□□ 0.84
LRRC28-210ENST00000558879 ZNF287Q9HBT7 754 aa20.3■□□□□ 0.84
LRRC28-210ENST00000558879 CWC22Q9HCG8 908 aaKnown RBP20.3■□□□□ 0.84
LRRC28-210ENST00000558879 SMCHD1A6NHR9 2005 aa20.3■□□□□ 0.84
LRRC28-210ENST00000558879 APPP05067 770 aa20.29■□□□□ 0.84
LRRC28-210ENST00000558879 ATP2B2Q01814 1243 aa20.29■□□□□ 0.84
LRRC28-210ENST00000558879 PPARAQ07869 468 aa20.29■□□□□ 0.84
LRRC28-210ENST00000558879 WDR78Q5VTH9 848 aa20.29■□□□□ 0.84
LRRC28-210ENST00000558879 HTATIP2Q9BUP3 242 aa20.29■□□□□ 0.84
LRRC28-210ENST00000558879 FLRT1Q9NZU1 646 aa20.29■□□□□ 0.84
LRRC28-210ENST00000558879 IVNS1ABPQ9Y6Y0 642 aa20.29■□□□□ 0.84
LRRC28-210ENST00000558879 PRDM1O75626 825 aa20.28■□□□□ 0.84
LRRC28-210ENST00000558879 IGHDP01880 384 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms