RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 AKR1B1P15121 316 aa15.92■□□□□ 0.14
TPM1-215ENST00000558868 MYSM1Q5VVJ2 828 aa15.92■□□□□ 0.14
TPM1-215ENST00000558868 ZFPM1Q8IX07 1006 aa15.92■□□□□ 0.14
TPM1-215ENST00000558868 RTEL1Q9NZ71 1219 aa15.92■□□□□ 0.14
TPM1-215ENST00000558868 PALM3A6NDB9 673 aaPredicted RBP15.91■□□□□ 0.14
TPM1-215ENST00000558868 MPHOSPH10O00566 681 aaKnown RBP15.91■□□□□ 0.14
TPM1-215ENST00000558868 YEATS4O95619 227 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 GUCY1A2P33402 732 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 TNNI2P48788 182 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 ZNF280AP59817 542 aaPredicted RBP15.91■□□□□ 0.14
TPM1-215ENST00000558868 PKN1Q16512 942 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 CERKLQ49MI3 558 aaPredicted RBP15.91■□□□□ 0.14
TPM1-215ENST00000558868 TATDN1Q6P1N9 297 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 FAM83AQ86UY5 434 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 CMTR1Q8N1G2 835 aaKnown RBP15.91■□□□□ 0.14
TPM1-215ENST00000558868 NLGN2Q8NFZ4 835 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 DPF2Q92785 391 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 ZBED3Q96IU2 234 aaPredicted RBP15.91■□□□□ 0.14
TPM1-215ENST00000558868 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.91■□□□□ 0.14
TPM1-215ENST00000558868 SH3GLB2Q9NR46 395 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 POLR3EQ9NVU0 708 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 MAD2L2Q9UI95 211 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 MYH6P13533 1939 aa15.91■□□□□ 0.14
TPM1-215ENST00000558868 FZD9O00144 591 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 SCG2P13521 617 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 ZNF445P59923 1031 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 PFKFB3Q16875 520 aaPredicted RBP15.9■□□□□ 0.14
TPM1-215ENST00000558868 ASPRV1Q53RT3 343 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 L1TD1Q5T7N2 865 aaKnown RBP15.9■□□□□ 0.14
TPM1-215ENST00000558868 TMEM179Q6ZVK1 233 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 SH3BP5LQ7L8J4 393 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 NOSTRINQ8IVI9 506 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 KCNG4Q8TDN1 519 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 USP28Q96RU2 1077 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 CSRNP1Q96S65 589 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 SPZ1Q9BXG8 430 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 KANSL2Q9H9L4 492 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 MYOZ2Q9NPC6 264 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 GJB4Q9NTQ9 266 aa15.9■□□□□ 0.14
TPM1-215ENST00000558868 GOLGA6L3A6NEY3 463 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 KIF28PB7ZC32 967 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 TCP10L2B9ZVM9 353 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 KLRF2D3W0D1 207 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 CALML3P27482 149 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 DEKP35659 375 aaKnown RBP15.89■□□□□ 0.13
TPM1-215ENST00000558868 RASSF7Q02833 373 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 STK38Q15208 465 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 ZSCAN23Q3MJ62 389 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 CCDC183Q5T5S1 534 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 DIS3L2Q8IYB7 885 aaKnown RBP15.89■□□□□ 0.13
TPM1-215ENST00000558868 JMYQ8N9B5 988 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 CABP5Q9NP86 173 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 NYAP2Q9P242 653 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 CLIP2Q9UDT6 1046 aa15.89■□□□□ 0.13
TPM1-215ENST00000558868 CLRN2A0PK11 232 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 KRT2P35908 639 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 NASPP49321 788 aaPredicted RBP15.88■□□□□ 0.13
TPM1-215ENST00000558868 TNFAIP1Q13829 316 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 SF3A1Q15459 793 aaKnown RBP15.88■□□□□ 0.13
TPM1-215ENST00000558868 GPR162Q16538 588 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 ABCB5Q2M3G0 1257 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 RILPL1Q5EBL4 403 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 RBM26Q5T8P6 1007 aaKnown RBP15.88■□□□□ 0.13
TPM1-215ENST00000558868 ANO1Q5XXA6 986 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 CCDC148Q8NFR7 591 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 MKL1Q969V6 931 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 PHF20Q9BVI0 1012 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 DNAJC18Q9H819 358 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 VEZTQ9HBM0 779 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 TMEM63CQ9P1W3 806 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 SYNPO2Q9UMS6 1093 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 KCNJ14Q9UNX9 436 aa15.88■□□□□ 0.13
TPM1-215ENST00000558868 GREB1LQ9C091 1923 aaPredicted RBP15.88■□□□□ 0.13
TPM1-215ENST00000558868 SIPA1L1O43166 1804 aa15.87■□□□□ 0.13
TPM1-215ENST00000558868 TBC1D12O60347 775 aa15.87■□□□□ 0.13
TPM1-215ENST00000558868 SNHG28P0DPA3 235 aa15.87■□□□□ 0.13
TPM1-215ENST00000558868 CEBPZQ03701 1054 aaKnown RBP15.87■□□□□ 0.13
TPM1-215ENST00000558868 GPATCH4Q5T3I0 446 aaKnown RBP15.87■□□□□ 0.13
TPM1-215ENST00000558868 GALNT17Q6IS24 598 aa15.87■□□□□ 0.13
TPM1-215ENST00000558868 STAG2Q8N3U4 1231 aa15.87■□□□□ 0.13
TPM1-215ENST00000558868 BICD2Q8TD16 824 aa15.87■□□□□ 0.13
TPM1-215ENST00000558868 CCDC12Q8WUD4 166 aaPredicted RBP15.87■□□□□ 0.13
TPM1-215ENST00000558868 RRP36Q96EU6 259 aaKnown RBP15.87■□□□□ 0.13
TPM1-215ENST00000558868 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.87■□□□□ 0.13
TPM1-215ENST00000558868 VPS54Q9P1Q0 977 aa15.87■□□□□ 0.13
TPM1-215ENST00000558868 SEC63Q9UGP8 760 aaKnown RBP15.87■□□□□ 0.13
TPM1-215ENST00000558868 BTBD18B2RXH4 712 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 UBE2Q2LH0YL09 131 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 hCG_1984214I3L0E3 225 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 WNT10BO00744 389 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 PDHBP11177 359 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 LMNB1P20700 586 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 ME1P48163 572 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 GMPSP49915 693 aaPredicted RBP15.86■□□□□ 0.13
TPM1-215ENST00000558868 NLRP5P59047 1200 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 ARHGAP27Q6ZUM4 889 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 DNAJC5GQ8N7S2 189 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 ZNF713Q8N859 430 aaPredicted RBP15.86■□□□□ 0.13
TPM1-215ENST00000558868 LINC00301Q8NCQ3 95 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 DDX19AQ9NUU7 478 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms