RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 DDX20Q9UHI6 824 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 UNC80Q8N2C7 3258 aa13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 RLFQ13129 1914 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 HOXC6P09630 235 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 CYP2C19P33261 490 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 ATN1P54259 1190 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 ATP2B2Q01814 1243 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 C8orf34Q49A92 452 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 LBX2Q6XYB7 198 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 PLEKHM2Q8IWE5 1019 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 MAGEB6Q8N7X4 407 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 GUCD1Q96NT3 240 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 EHD4Q9H223 541 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 SERPINB13Q9UIV8 391 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 NOP58Q9Y2X3 529 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 SMCHD1A6NHR9 2005 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 SPDYE16A6NNV3 312 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 CNGA1P29973 690 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 SHMT1P34896 483 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 PLCD1P51178 756 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 EVX2Q03828 476 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 GRB14Q14449 540 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 ABCB5Q2M3G0 1257 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 LPAR1Q92633 364 aa13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 ZBTB47Q9UFB7 747 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-204ENST00000558376 ZNFX1Q9P2E3 1918 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-204ENST00000558376 USP14P54578 494 aa13.47□□□□□ -0.25
RABGGTA-204ENST00000558376 FAM109BQ6ICB4 259 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-204ENST00000558376 COL25A1Q9BXS0 654 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-204ENST00000558376 LRRCC1Q9C099 1032 aa13.47□□□□□ -0.25
RABGGTA-204ENST00000558376 RPAP3Q9H6T3 665 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-204ENST00000558376 LTBP2Q14767 1821 aa13.47□□□□□ -0.25
RABGGTA-204ENST00000558376 RTP1P59025 263 aa13.46□□□□□ -0.25
RABGGTA-204ENST00000558376 TSHZ3Q63HK5 1081 aa13.46□□□□□ -0.25
RABGGTA-204ENST00000558376 TTC6Q86TZ1 520 aa13.46□□□□□ -0.25
RABGGTA-204ENST00000558376 FAM161BQ96MY7 647 aa13.46□□□□□ -0.25
RABGGTA-204ENST00000558376 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-204ENST00000558376 A0A1W2PRG0 241 aa13.46□□□□□ -0.26
RABGGTA-204ENST00000558376 SEC24BO95487 1268 aa13.46□□□□□ -0.26
RABGGTA-204ENST00000558376 SEPT2Q15019 361 aa13.46□□□□□ -0.26
RABGGTA-204ENST00000558376 GJC2Q5T442 439 aaPredicted RBP13.46□□□□□ -0.26
RABGGTA-204ENST00000558376 RHPN1Q8TCX5 695 aa13.46□□□□□ -0.26
RABGGTA-204ENST00000558376 RIOK1Q9BRS2 568 aaKnown RBP13.46□□□□□ -0.26
RABGGTA-204ENST00000558376 CABP5Q9NP86 173 aa13.46□□□□□ -0.26
RABGGTA-204ENST00000558376 IVNS1ABPQ9Y6Y0 642 aa13.46□□□□□ -0.26
RABGGTA-204ENST00000558376 DNM1LO00429 736 aa13.45□□□□□ -0.26
RABGGTA-204ENST00000558376 MSCO60682 206 aa13.45□□□□□ -0.26
RABGGTA-204ENST00000558376 CYBAP13498 195 aa13.45□□□□□ -0.26
RABGGTA-204ENST00000558376 GABPAQ06546 454 aa13.45□□□□□ -0.26
RABGGTA-204ENST00000558376 KIAA1755Q5JYT7 1200 aa13.45□□□□□ -0.26
RABGGTA-204ENST00000558376 ANO1Q5XXA6 986 aa13.45□□□□□ -0.26
RABGGTA-204ENST00000558376 MOV10L1Q9BXT6 1211 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-204ENST00000558376 COBLO75128 1261 aa13.44□□□□□ -0.26
RABGGTA-204ENST00000558376 CERS3Q8IU89 383 aa13.44□□□□□ -0.26
RABGGTA-204ENST00000558376 ATP11BQ9Y2G3 1177 aa13.44□□□□□ -0.26
RABGGTA-204ENST00000558376 NAV1Q8NEY1 1877 aa13.44□□□□□ -0.26
RABGGTA-204ENST00000558376 ADORA2AP29274 412 aa13.44□□□□□ -0.26
RABGGTA-204ENST00000558376 MAP3K12Q12852 859 aa13.44□□□□□ -0.26
RABGGTA-204ENST00000558376 SHHQ15465 462 aa13.44□□□□□ -0.26
RABGGTA-204ENST00000558376 SLC39A5Q6ZMH5 540 aa13.44□□□□□ -0.26
RABGGTA-204ENST00000558376 DPP9Q86TI2 863 aa13.44□□□□□ -0.26
RABGGTA-204ENST00000558376 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.44□□□□□ -0.26
RABGGTA-204ENST00000558376 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
RABGGTA-204ENST00000558376 RAB11FIP3O75154 756 aa13.43□□□□□ -0.26
RABGGTA-204ENST00000558376 POLR3DP05423 398 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-204ENST00000558376 COG2Q14746 738 aa13.43□□□□□ -0.26
RABGGTA-204ENST00000558376 PRAMEF19Q5SWL8 479 aa13.43□□□□□ -0.26
RABGGTA-204ENST00000558376 C9orf50Q5SZB4 431 aa13.43□□□□□ -0.26
RABGGTA-204ENST00000558376 OLFML2BQ68BL8 750 aa13.43□□□□□ -0.26
RABGGTA-204ENST00000558376 HOXC10Q9NYD6 342 aa13.43□□□□□ -0.26
RABGGTA-204ENST00000558376 MAGEB6P1A0A0J9YX57 407 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 CYP2D6P10635 497 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 GSPT1P15170 499 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 ERCC3P19447 782 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 SIAH1Q8IUQ4 282 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 ARRDC4Q8NCT1 418 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 SPATC1LQ9H0A9 340 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 A0A0G2JMZ2 1700 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 STRNO43815 780 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 PDE1AP54750 535 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 TRIM60Q495X7 471 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 SH3RF1Q7Z6J0 888 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 AACSQ86V21 672 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 SLC44A5Q8NCS7 719 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 SHCBP1Q8NEM2 672 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 KIF1BPQ96EK5 621 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 MCM9Q9NXL9 1143 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 PRKAG2Q9UGJ0 569 aa13.42□□□□□ -0.26
RABGGTA-204ENST00000558376 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
RABGGTA-204ENST00000558376 MPHOSPH10O00566 681 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-204ENST00000558376 SEPT4O43236 478 aa13.41□□□□□ -0.26
RABGGTA-204ENST00000558376 DSG3P32926 999 aa13.41□□□□□ -0.26
RABGGTA-204ENST00000558376 BADQ92934 168 aa13.41□□□□□ -0.26
RABGGTA-204ENST00000558376 CDX2Q99626 313 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-204ENST00000558376 TANGO6Q9C0B7 1094 aa13.41□□□□□ -0.26
RABGGTA-204ENST00000558376 SEMA6BQ9H3T3 888 aa13.41□□□□□ -0.26
RABGGTA-204ENST00000558376 MYH8P13535 1937 aa13.41□□□□□ -0.26
RABGGTA-204ENST00000558376 BAZ2AQ9UIF9 1905 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms