RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 STAMBPL1Q96FJ0 436 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 USP28Q96RU2 1077 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TRIM39Q9HCM9 518 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 PAPOLBQ9NRJ5 636 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 CHL1O00533 1208 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 HARSP12081 509 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TMOD1P28289 359 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 MORC3Q14149 939 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 PTPROQ16827 1216 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 USHBP1Q8N6Y0 703 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 DLGAP2Q9P1A6 1054 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 CFAP69A5D8W1 941 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 IGBP1P78318 339 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 GJC2Q5T442 439 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 RAB34Q9BZG1 259 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 NAPBQ9H115 298 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 FBXO2Q9UK22 296 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 CASP14P31944 242 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 IFNAR2P48551 515 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 USP14P54578 494 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 SYCE1Q8N0S2 351 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 ESRRAP11474 423 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 PDIA3P30101 505 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 RNASELQ05823 741 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 TFCP2Q12800 502 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 NXNQ6DKJ4 435 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 HS2ST1Q7LGA3 356 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 MPHOSPH6Q99547 160 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 EHD2Q9NZN4 543 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 CTNND1O60716 968 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 CDC25BP30305 580 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 GDAP1Q8TB36 358 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 FUT8Q9BYC5 575 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 NCF2P19878 526 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 USP4Q13107 963 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 ACBD5Q5T8D3 534 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 RAPGEF4Q8WZA2 1011 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 PAGE5Q96GU1 130 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 SH3GL1Q99961 368 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 SBNO1A3KN83 1393 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 USP47Q96K76 1375 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 hCG_1642624A0A1W2PR95 340 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 TCP11X1B4DZS4 312 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 FAM227BQ96M60 508 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 NLRC4Q9NPP4 1024 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 ATP8A1Q9Y2Q0 1164 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 KRT14P02533 472 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 PGBD1Q96JS3 809 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 MAGOHP61326 146 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 FOXD4Q12950 439 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 LRGUKQ96M69 825 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 TMEM266Q2M3C6 531 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 SIKE1Q9BRV8 207 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 GGT7Q9UJ14 662 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 GNAQP50148 359 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 IRX4P78413 519 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 CENPKQ9BS16 269 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 DNM3Q9UQ16 869 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 ATP5JP18859 108 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 ADD1P35611 737 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 COPS6Q7L5N1 327 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 SPATA17Q96L03 361 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 NPHP3Q7Z494 1330 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 TPD52L2O43399 206 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 CRCPO75575 148 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 PSMD7P51665 324 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 KRT79Q5XKE5 535 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 G2E3Q7L622 706 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 NSMCE1Q8WV22 266 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 DTNBP1Q96EV8 351 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 KCNJ18B7U540 433 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 KCNJ12Q14500 433 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 DAB1O75553 588 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 GLE1Q53GS7 698 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 NBPF5PQ86XG9 351 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 MIEF2Q96C03 454 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 PLVAPQ9BX97 442 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 USTQ9Y2C2 406 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 PFKFB2O60825 505 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 APOEP02649 317 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 TROVE2P10155 538 aaKnown RBP eCLIP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 RXRAP19793 462 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 PGM1P36871 562 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 CLUL1Q15846 466 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 CNOT10Q9H9A5 744 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 PSD3Q9NYI0 1048 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 CDC5LQ99459 802 aaKnown RBP4.06□□□□□ -1.76
ATXN3-248ENST00000558190 POC1B-GALNT4F8VUJ3 575 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 SESTD1Q86VW0 696 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 SEC16BQ96JE7 1060 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 SMYD3Q9H7B4 428 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 POSTNQ15063 836 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 RASSF3Q86WH2 238 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 FCHSD1Q86WN1 690 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 KSR1Q8IVT5 923 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 MB21D1Q8N884 522 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 TXLNGQ9NUQ3 528 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 TMTC3Q6ZXV5 915 aa4.06□□□□□ -1.76
ATXN3-248ENST00000558190 CTAGE3PQ8IX95 158 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms