RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 MYPNQ86TC9 1320 aa27.05■■□□□ 1.92
PABPN1-207ENST00000556821 A0A0C4DFX4 3053 aa27.05■■□□□ 1.92
PABPN1-207ENST00000556821 ZNFX1Q9P2E3 1918 aaKnown RBP27.04■■□□□ 1.92
PABPN1-207ENST00000556821 TRIM6-TRIM34B2RNG4 842 aa27.04■■□□□ 1.92
PABPN1-207ENST00000556821 GRK4P32298 578 aa27.04■■□□□ 1.92
PABPN1-207ENST00000556821 ICA1Q05084 483 aa27.04■■□□□ 1.92
PABPN1-207ENST00000556821 TICAM2Q86XR7 235 aa27.04■■□□□ 1.92
PABPN1-207ENST00000556821 HELLSQ9NRZ9 838 aa27.04■■□□□ 1.92
PABPN1-207ENST00000556821 CCL5P13501 91 aa27.03■■□□□ 1.92
PABPN1-207ENST00000556821 PRKCZQ05513 592 aa27.03■■□□□ 1.92
PABPN1-207ENST00000556821 KIAA1755Q5JYT7 1200 aa27.03■■□□□ 1.92
PABPN1-207ENST00000556821 VPS53Q5VIR6 699 aa27.03■■□□□ 1.92
PABPN1-207ENST00000556821 RILPL2Q969X0 211 aa27.03■■□□□ 1.92
PABPN1-207ENST00000556821 LRCH3Q96II8 777 aa27.03■■□□□ 1.92
PABPN1-207ENST00000556821 NACAP1Q9BZK3 213 aa27.03■■□□□ 1.92
PABPN1-207ENST00000556821 GABRQQ9UN88 632 aa27.03■■□□□ 1.92
PABPN1-207ENST00000556821 COL6A3P12111 3177 aa27.03■■□□□ 1.92
PABPN1-207ENST00000556821 USP17L15C9J2P7 530 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 USP17L13C9JLJ4 530 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 USP17L11C9JVI0 530 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 USP17L18D6R9N7 530 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 USP17L22D6RA61 530 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 USP17L17D6RBQ6 530 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 USP17L19D6RCP7 530 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 USP17L20D6RJB6 530 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 HOXD10P28358 340 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 USP17L24Q0WX57 530 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 NMIQ13287 307 aaPredicted RBP27.02■■□□□ 1.92
PABPN1-207ENST00000556821 CATSPERGQ6ZRH7 1159 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 NAPBQ9H115 298 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 RBPJLQ9UBG7 517 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 TMX2Q9Y320 296 aa27.02■■□□□ 1.92
PABPN1-207ENST00000556821 TNPO2O14787 897 aaKnown RBP27.01■■□□□ 1.91
PABPN1-207ENST00000556821 RPAP3Q9H6T3 665 aaPredicted RBP27.01■■□□□ 1.91
PABPN1-207ENST00000556821 ARHGEF10LQ9HCE6 1279 aa27.01■■□□□ 1.91
PABPN1-207ENST00000556821 EEF2P13639 858 aaKnown RBP27■■□□□ 1.91
PABPN1-207ENST00000556821 ZNF589Q86UQ0 364 aaPredicted RBP27■■□□□ 1.91
PABPN1-207ENST00000556821 KANSL2Q9H9L4 492 aa27■■□□□ 1.91
PABPN1-207ENST00000556821 PRDM1O75626 825 aa26.99■■□□□ 1.91
PABPN1-207ENST00000556821 PPARAQ07869 468 aa26.99■■□□□ 1.91
PABPN1-207ENST00000556821 MCMDC2Q4G0Z9 681 aa26.99■■□□□ 1.91
PABPN1-207ENST00000556821 RNF208Q9H0X6 261 aa26.99■■□□□ 1.91
PABPN1-207ENST00000556821 MKNK2Q9HBH9 465 aa26.99■■□□□ 1.91
PABPN1-207ENST00000556821 SDSP20132 328 aa26.98■■□□□ 1.91
PABPN1-207ENST00000556821 FLT3LGP49771 235 aa26.98■■□□□ 1.91
PABPN1-207ENST00000556821 RAET1EQ8TD07 263 aa26.98■■□□□ 1.91
PABPN1-207ENST00000556821 U2AF1L4Q8WU68 220 aaKnown RBP26.98■■□□□ 1.91
PABPN1-207ENST00000556821 VCPKMTQ9H867 229 aa26.98■■□□□ 1.91
PABPN1-207ENST00000556821 PLIN4Q96Q06 1357 aa26.97■■□□□ 1.91
PABPN1-207ENST00000556821 SPDYE16A6NNV3 312 aaPredicted RBP26.97■■□□□ 1.91
PABPN1-207ENST00000556821 CNMDO75829 334 aa26.97■■□□□ 1.91
PABPN1-207ENST00000556821 ERVK-9P63128 1117 aa26.97■■□□□ 1.91
PABPN1-207ENST00000556821 ERVK-24P63145 666 aa26.97■■□□□ 1.91
PABPN1-207ENST00000556821 Q3C1V9 767 aa26.97■■□□□ 1.91
PABPN1-207ENST00000556821 LBX2Q6XYB7 198 aa26.97■■□□□ 1.91
PABPN1-207ENST00000556821 GTF3C2Q8WUA4 911 aaPredicted RBP26.97■■□□□ 1.91
PABPN1-207ENST00000556821 LPAR1Q92633 364 aa26.97■■□□□ 1.91
PABPN1-207ENST00000556821 PAGR1Q9BTK6 254 aa26.97■■□□□ 1.91
PABPN1-207ENST00000556821 SH2D4AQ9H788 454 aa26.97■■□□□ 1.91
PABPN1-207ENST00000556821 ZNF236Q9UL36 1845 aa26.97■■□□□ 1.91
PABPN1-207ENST00000556821 LAMA3Q16787 3333 aa26.96■■□□□ 1.91
PABPN1-207ENST00000556821 CCDC171Q6TFL3 1326 aa26.96■■□□□ 1.91
PABPN1-207ENST00000556821 IGKV6D-41A0A0C4DH26 115 aa26.96■■□□□ 1.91
PABPN1-207ENST00000556821 FARP2O94887 1054 aaPredicted RBP26.96■■□□□ 1.91
PABPN1-207ENST00000556821 SGPL1O95470 568 aa26.96■■□□□ 1.91
PABPN1-207ENST00000556821 GPR153Q6NV75 609 aa26.96■■□□□ 1.91
PABPN1-207ENST00000556821 SPICE1Q8N0Z3 855 aa26.96■■□□□ 1.91
PABPN1-207ENST00000556821 GPRC5AQ8NFJ5 357 aa26.96■■□□□ 1.91
PABPN1-207ENST00000556821 PLXNA1Q9UIW2 1896 aa26.96■■□□□ 1.91
PABPN1-207ENST00000556821 CUL9Q8IWT3 2517 aa26.95■■□□□ 1.91
PABPN1-207ENST00000556821 ATP2B2Q01814 1243 aa26.95■■□□□ 1.9
PABPN1-207ENST00000556821 ALX1Q15699 326 aa26.95■■□□□ 1.9
PABPN1-207ENST00000556821 COA7Q96BR5 231 aa26.95■■□□□ 1.9
PABPN1-207ENST00000556821 PORCNQ9H237 461 aa26.95■■□□□ 1.9
PABPN1-207ENST00000556821 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.95■■□□□ 1.9
PABPN1-207ENST00000556821 TACC3Q9Y6A5 838 aa26.95■■□□□ 1.9
PABPN1-207ENST00000556821 HSPD1P10809 573 aaKnown RBP26.94■■□□□ 1.9
PABPN1-207ENST00000556821 GSPT1P15170 499 aaKnown RBP26.94■■□□□ 1.9
PABPN1-207ENST00000556821 CTDSPL2Q05D32 466 aa26.94■■□□□ 1.9
PABPN1-207ENST00000556821 IRF5Q13568 498 aa26.94■■□□□ 1.9
PABPN1-207ENST00000556821 TTC22Q5TAA0 569 aa26.94■■□□□ 1.9
PABPN1-207ENST00000556821 TANGO6Q9C0B7 1094 aa26.94■■□□□ 1.9
PABPN1-207ENST00000556821 ZNF287Q9HBT7 754 aa26.94■■□□□ 1.9
PABPN1-207ENST00000556821 GJD2Q9UKL4 321 aa26.94■■□□□ 1.9
PABPN1-207ENST00000556821 RABGAP1Q9Y3P9 1069 aa26.94■■□□□ 1.9
PABPN1-207ENST00000556821 FRMPD3Q5JV73 1810 aa26.94■■□□□ 1.9
PABPN1-207ENST00000556821 ZMYM6O95789 1325 aa26.93■■□□□ 1.9
PABPN1-207ENST00000556821 CAPN2P17655 700 aa26.93■■□□□ 1.9
PABPN1-207ENST00000556821 UBXN2AP68543 259 aa26.93■■□□□ 1.9
PABPN1-207ENST00000556821 PDE4BQ07343 736 aa26.93■■□□□ 1.9
PABPN1-207ENST00000556821 ZNF444Q8N0Y2 327 aaPredicted RBP26.93■■□□□ 1.9
PABPN1-207ENST00000556821 UNC93B1Q9H1C4 597 aa26.93■■□□□ 1.9
PABPN1-207ENST00000556821 BTBD7Q9P203 1132 aa26.93■■□□□ 1.9
PABPN1-207ENST00000556821 NYAP2Q9P242 653 aa26.93■■□□□ 1.9
PABPN1-207ENST00000556821 ANAPC4Q9UJX5 808 aa26.93■■□□□ 1.9
PABPN1-207ENST00000556821 WDR46O15213 610 aaKnown RBP26.92■■□□□ 1.9
PABPN1-207ENST00000556821 ADCY3O60266 1144 aa26.92■■□□□ 1.9
PABPN1-207ENST00000556821 FGAP02671 866 aa26.92■■□□□ 1.9
PABPN1-207ENST00000556821 BMP8BP34820 402 aa26.92■■□□□ 1.9
PABPN1-207ENST00000556821 SLAIN1Q8ND83 568 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms