RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 DCAF5Q96JK2 942 aa6.09□□□□□ -1.43
TRAV15-201ENST00000556680 APBA2Q99767 749 aa6.09□□□□□ -1.43
TRAV15-201ENST00000556680 MKRN2Q9H000 416 aaKnown RBP6.09□□□□□ -1.43
TRAV15-201ENST00000556680 PFDN2Q9UHV9 154 aa6.09□□□□□ -1.43
TRAV15-201ENST00000556680 TPX2Q9ULW0 747 aaKnown RBP6.09□□□□□ -1.43
TRAV15-201ENST00000556680 TBX22Q9Y458 520 aa6.09□□□□□ -1.43
TRAV15-201ENST00000556680 MRPL42Q9Y6G3 142 aaKnown RBP6.09□□□□□ -1.43
TRAV15-201ENST00000556680 NESP48681 1621 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 TOP2BQ02880 1626 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 NAT2P11245 290 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 GATA4P43694 442 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 TCEAL1Q15170 157 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 SV2CQ496J9 727 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 HEATR6Q6AI08 1181 aaKnown RBP6.08□□□□□ -1.44
TRAV15-201ENST00000556680 ADAT2Q7Z6V5 191 aaKnown RBP6.08□□□□□ -1.44
TRAV15-201ENST00000556680 TOP6BLQ8N6T0 577 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 ST13P5Q8NFI4 369 aaPredicted RBP6.08□□□□□ -1.44
TRAV15-201ENST00000556680 PPP1R13LQ8WUF5 828 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 KLHL6Q8WZ60 621 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 TP53INP1Q96A56 240 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 ZNF512BQ96KM6 892 aaPredicted RBP6.08□□□□□ -1.44
TRAV15-201ENST00000556680 KREMEN1Q96MU8 473 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 PSMG3-AS1Q96PY0 264 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 FAM83CQ9BQN1 747 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 STOML1Q9UBI4 398 aa6.08□□□□□ -1.44
TRAV15-201ENST00000556680 KDM2BQ8NHM5 1336 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 C9IYK1 514 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 AGRPO00253 132 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 RNF4P78317 190 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 SSRP1Q08945 709 aaKnown RBP6.07□□□□□ -1.44
TRAV15-201ENST00000556680 MRM1Q6IN84 353 aaKnown RBP6.07□□□□□ -1.44
TRAV15-201ENST00000556680 SEZ6L2Q6UXD5 910 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 JAZF1Q86VZ6 243 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 LILRB2Q8N423 598 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 DNAJB8Q8NHS0 232 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 PPP1R14AQ96A00 147 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 TBC1D32Q96NH3 1257 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 DUSP23Q9BVJ7 150 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 C1GALT1Q9NS00 363 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 LRP2BPQ9P2M1 347 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 STK17AQ9UEE5 414 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 FBXL21Q9UKT6 434 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 CFTRP13569 1480 aa6.07□□□□□ -1.44
TRAV15-201ENST00000556680 WRNQ14191 1432 aaPredicted RBP eCLIP6.07□□□□□ -1.44
TRAV15-201ENST00000556680 ANKRD34BA5PLL1 514 aa6.06□□□□□ -1.44
TRAV15-201ENST00000556680 IQCA1LA6NCM1 817 aa6.06□□□□□ -1.44
TRAV15-201ENST00000556680 SUSD5O60279 629 aa6.06□□□□□ -1.44
TRAV15-201ENST00000556680 FAM87AP0C7U9 286 aa6.06□□□□□ -1.44
TRAV15-201ENST00000556680 AXDND1Q5T1B0 1012 aaPredicted RBP6.06□□□□□ -1.44
TRAV15-201ENST00000556680 NBPF12Q5TAG4 269 aaPredicted RBP6.06□□□□□ -1.44
TRAV15-201ENST00000556680 SPATC1Q76KD6 591 aa6.06□□□□□ -1.44
TRAV15-201ENST00000556680 PPFIBP1Q86W92 1011 aa6.06□□□□□ -1.44
TRAV15-201ENST00000556680 RNPC3Q96LT9 517 aaKnown RBP6.06□□□□□ -1.44
TRAV15-201ENST00000556680 GBP3Q9H0R5 595 aa6.06□□□□□ -1.44
TRAV15-201ENST00000556680 EPN3Q9H201 632 aa6.06□□□□□ -1.44
TRAV15-201ENST00000556680 RAXQ9Y2V3 346 aa6.06□□□□□ -1.44
TRAV15-201ENST00000556680 SUGT1Q9Y2Z0 365 aa6.06□□□□□ -1.44
TRAV15-201ENST00000556680 HMX2A2RU54 273 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 LEFTY1O75610 366 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 PPM1BO75688 479 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 EPHX1P07099 455 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 ZNF143P52747 638 aaPredicted RBP6.05□□□□□ -1.44
TRAV15-201ENST00000556680 CYP27C1Q4G0S4 372 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 NOL9Q5SY16 702 aaKnown RBP6.05□□□□□ -1.44
TRAV15-201ENST00000556680 DCAF15Q66K64 600 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 OGFOD3Q6PK18 319 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 C7orf61Q8IZ16 206 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 FAM9AQ8IZU1 332 aaPredicted RBP6.05□□□□□ -1.44
TRAV15-201ENST00000556680 SH3TC2Q8TF17 1288 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 RNF141Q8WVD5 230 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 ZNF669Q96BR6 464 aaPredicted RBP6.05□□□□□ -1.44
TRAV15-201ENST00000556680 FGD4Q96M96 766 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 HAUS7Q99871 368 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 SSBP4Q9BWG4 385 aaPredicted RBP6.05□□□□□ -1.44
TRAV15-201ENST00000556680 ASPNQ9BXN1 380 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 PRDM5Q9NQX1 630 aaPredicted RBP6.05□□□□□ -1.44
TRAV15-201ENST00000556680 ZMYM5Q9UJ78 669 aa6.05□□□□□ -1.44
TRAV15-201ENST00000556680 FANCD2Q9BXW9 1451 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 CEP164Q9UPV0 1460 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 DIAPH1O60610 1272 aaKnown RBP6.04□□□□□ -1.44
TRAV15-201ENST00000556680 CBX7O95931 251 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 EOMESO95936 686 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 AUHQ13825 339 aaKnown RBP6.04□□□□□ -1.44
TRAV15-201ENST00000556680 ANKRD39Q53RE8 183 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 SFRP5Q5T4F7 317 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 LRRC47Q8N1G4 583 aaKnown RBP6.04□□□□□ -1.44
TRAV15-201ENST00000556680 FBXL6Q8N531 539 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 LRRN4CLQ8ND94 238 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 THAP3Q8WTV1 239 aaPredicted RBP6.04□□□□□ -1.44
TRAV15-201ENST00000556680 FBXL18Q96ME1 805 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 SPATA9Q9BWV2 254 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 ASCC2Q9H1I8 757 aaPredicted RBP6.04□□□□□ -1.44
TRAV15-201ENST00000556680 C7orf69Q9H7B7 122 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 GTF2IRD1Q9UHL9 959 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 KCNH3Q9ULD8 1083 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 ZNF451Q9Y4E5 1061 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 PCDHB12Q9Y5F1 795 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 CUX1P39880 1505 aa6.04□□□□□ -1.44
TRAV15-201ENST00000556680 DNMBPQ6XZF7 1577 aa6.03□□□□□ -1.44
TRAV15-201ENST00000556680 NOP56O00567 594 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms