RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SLC23A3Q6PIS1 610 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 DTWD2Q8NBA8 298 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 GPR62Q9BZJ7 368 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 ANTXR1Q9H6X2 564 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 ATP13A1Q9HD20 1204 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 MBNL3Q9NUK0 354 aaKnown RBP5□□□□□ -1.61
SCFD1-213ENST00000554776 LMCD1Q9NZU5 365 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 ADAMTS6Q9UKP5 1117 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 KCNH3Q9ULD8 1083 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 INPP5FQ9Y2H2 1132 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 TNFRSF10CO14798 259 aa4.99□□□□□ -1.61
SCFD1-213ENST00000554776 LRRN2O75325 713 aa4.99□□□□□ -1.61
SCFD1-213ENST00000554776 RNASE1P07998 156 aaKnown RBP4.99□□□□□ -1.61
SCFD1-213ENST00000554776 POLR2BP30876 1174 aaKnown RBP4.99□□□□□ -1.61
SCFD1-213ENST00000554776 ZP2Q05996 745 aa4.99□□□□□ -1.61
SCFD1-213ENST00000554776 PI4K2BQ8TCG2 481 aa4.99□□□□□ -1.61
SCFD1-213ENST00000554776 UBE2FQ969M7 185 aa4.99□□□□□ -1.61
SCFD1-213ENST00000554776 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.99□□□□□ -1.61
SCFD1-213ENST00000554776 DUSP15Q9H1R2 295 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-213ENST00000554776 ZSWIM5Q9P217 1185 aa4.99□□□□□ -1.61
SCFD1-213ENST00000554776 PPT2Q9UMR5 302 aa4.99□□□□□ -1.61
SCFD1-213ENST00000554776 EFR3BQ9Y2G0 817 aa4.99□□□□□ -1.61
SCFD1-213ENST00000554776 TAL1P17542 331 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-213ENST00000554776 ITGB5P18084 799 aa4.98□□□□□ -1.61
SCFD1-213ENST00000554776 RNF4P78317 190 aa4.98□□□□□ -1.61
SCFD1-213ENST00000554776 GAB4Q2WGN9 574 aa4.98□□□□□ -1.61
SCFD1-213ENST00000554776 TMPRSS7Q7RTY8 843 aa4.98□□□□□ -1.61
SCFD1-213ENST00000554776 TAB3Q8N5C8 712 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-213ENST00000554776 RBBP8NLQ8NC74 664 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-213ENST00000554776 SEC16BQ96JE7 1060 aa4.98□□□□□ -1.61
SCFD1-213ENST00000554776 FERD3LQ96RJ6 166 aa4.98□□□□□ -1.61
SCFD1-213ENST00000554776 TRIT1Q9H3H1 467 aaKnown RBP4.98□□□□□ -1.61
SCFD1-213ENST00000554776 CARS2Q9HA77 564 aaKnown RBP4.98□□□□□ -1.61
SCFD1-213ENST00000554776 CAPN10Q9HC96 672 aa4.98□□□□□ -1.61
SCFD1-213ENST00000554776 ESR1P03372 595 aa4.97□□□□□ -1.61
SCFD1-213ENST00000554776 ATF4P18848 351 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-213ENST00000554776 NASPP49321 788 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-213ENST00000554776 NBPF12Q5TAG4 269 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-213ENST00000554776 INTS3Q68E01 1043 aaKnown RBP4.97□□□□□ -1.61
SCFD1-213ENST00000554776 CCDC81Q6ZN84 652 aa4.97□□□□□ -1.61
SCFD1-213ENST00000554776 TSPYL5Q86VY4 417 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-213ENST00000554776 LSRQ86X29 649 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-213ENST00000554776 LRRN4CLQ8ND94 238 aa4.97□□□□□ -1.61
SCFD1-213ENST00000554776 SLC9A7Q96T83 725 aa4.97□□□□□ -1.61
SCFD1-213ENST00000554776 RC3H2Q9HBD1 1191 aaKnown RBP4.97□□□□□ -1.61
SCFD1-213ENST00000554776 PRDM7Q9NQW5 492 aa4.97□□□□□ -1.61
SCFD1-213ENST00000554776 GPATCH2Q9NW75 528 aa4.97□□□□□ -1.61
SCFD1-213ENST00000554776 USP35Q9P2H5 1018 aa4.97□□□□□ -1.61
SCFD1-213ENST00000554776 WASH4PA8MWX3 477 aa4.96□□□□□ -1.62
SCFD1-213ENST00000554776 CLEC3AO75596 197 aa4.96□□□□□ -1.62
SCFD1-213ENST00000554776 ACRP10323 421 aa4.96□□□□□ -1.62
SCFD1-213ENST00000554776 TPP2P29144 1249 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-213ENST00000554776 CHMP4BP1P59074 171 aa4.96□□□□□ -1.62
SCFD1-213ENST00000554776 ZC3H6P61129 1189 aaKnown RBP4.96□□□□□ -1.62
SCFD1-213ENST00000554776 ATG4DQ86TL0 474 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-213ENST00000554776 TMEM192Q8IY95 271 aa4.96□□□□□ -1.62
SCFD1-213ENST00000554776 SLC43A3Q8NBI5 491 aa4.96□□□□□ -1.62
SCFD1-213ENST00000554776 SHDQ96IW2 340 aa4.96□□□□□ -1.62
SCFD1-213ENST00000554776 TM9SF2Q99805 663 aa4.96□□□□□ -1.62
SCFD1-213ENST00000554776 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.62
SCFD1-213ENST00000554776 SHISA3A0PJX4 238 aa4.95□□□□□ -1.62
SCFD1-213ENST00000554776 PAPLNO95428 1278 aa4.95□□□□□ -1.62
SCFD1-213ENST00000554776 FGRP09769 529 aa4.95□□□□□ -1.62
SCFD1-213ENST00000554776 JUNBP17275 347 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-213ENST00000554776 GIPRP48546 466 aa4.95□□□□□ -1.62
SCFD1-213ENST00000554776 GNL2Q13823 731 aaKnown RBP4.95□□□□□ -1.62
SCFD1-213ENST00000554776 NBPF9Q3BBW0 867 aa4.95□□□□□ -1.62
SCFD1-213ENST00000554776 FLAD1Q8NFF5 587 aa4.95□□□□□ -1.62
SCFD1-213ENST00000554776 SLC6A18Q96N87 628 aa4.95□□□□□ -1.62
SCFD1-213ENST00000554776 C8orf37Q96NL8 207 aa4.95□□□□□ -1.62
SCFD1-213ENST00000554776 GMLQ99445 158 aa4.95□□□□□ -1.62
SCFD1-213ENST00000554776 SRRTQ9BXP5 876 aaKnown RBP4.95□□□□□ -1.62
SCFD1-213ENST00000554776 STRIP2Q9ULQ0 834 aa4.95□□□□□ -1.62
SCFD1-213ENST00000554776 BIN1O00499 593 aa4.94□□□□□ -1.62
SCFD1-213ENST00000554776 GUCY2CP25092 1073 aa4.94□□□□□ -1.62
SCFD1-213ENST00000554776 NMIQ13287 307 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-213ENST00000554776 NAALADL2Q58DX5 795 aa4.94□□□□□ -1.62
SCFD1-213ENST00000554776 FBXW10Q5XX13 1052 aa4.94□□□□□ -1.62
SCFD1-213ENST00000554776 RUFY4Q6ZNE9 571 aa4.94□□□□□ -1.62
SCFD1-213ENST00000554776 CREG2Q8IUH2 290 aa4.94□□□□□ -1.62
SCFD1-213ENST00000554776 ENOX1Q8TC92 643 aaKnown RBP4.94□□□□□ -1.62
SCFD1-213ENST00000554776 ZNF512BQ96KM6 892 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-213ENST00000554776 ALPK1Q96QP1 1244 aa4.94□□□□□ -1.62
SCFD1-213ENST00000554776 C19orf73Q9NVV2 129 aa4.94□□□□□ -1.62
SCFD1-213ENST00000554776 SUCOQ9UBS9 1254 aaKnown RBP4.94□□□□□ -1.62
SCFD1-213ENST00000554776 DUSP13Q9UII6 198 aa4.94□□□□□ -1.62
SCFD1-213ENST00000554776 CTNND2Q9UQB3 1225 aa4.94□□□□□ -1.62
SCFD1-213ENST00000554776 EIF6P56537 245 aaKnown RBP4.93□□□□□ -1.62
SCFD1-213ENST00000554776 ARID5AQ03989 594 aa4.93□□□□□ -1.62
SCFD1-213ENST00000554776 MCF2L2Q86YR7 1114 aa4.93□□□□□ -1.62
SCFD1-213ENST00000554776 FAM169BQ8N8A8 192 aa4.93□□□□□ -1.62
SCFD1-213ENST00000554776 OR6P1Q8NGX9 317 aa4.93□□□□□ -1.62
SCFD1-213ENST00000554776 SYTL5Q8TDW5 730 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-213ENST00000554776 CCDC120Q96HB5 630 aa4.93□□□□□ -1.62
SCFD1-213ENST00000554776 DHRS1Q96LJ7 313 aa4.93□□□□□ -1.62
SCFD1-213ENST00000554776 HDAC8Q9BY41 377 aa4.93□□□□□ -1.62
SCFD1-213ENST00000554776 ASCC2Q9H1I8 757 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-213ENST00000554776 PCDHA11Q9Y5I1 949 aa4.93□□□□□ -1.62
SCFD1-213ENST00000554776 LOC105371045A0A1W2PR82 267 aa4.92□□□□□ -1.62
SCFD1-213ENST00000554776 FAM86C2PA6NEL3 165 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms