RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 KIAA1755Q5JYT7 1200 aa25.27■■□□□ 1.64
SDR39U1-208ENST00000554698 RALYLQ86SE5 291 aaKnown RBP25.27■■□□□ 1.64
SDR39U1-208ENST00000554698 IQCA1Q86XH1 822 aa25.27■■□□□ 1.64
SDR39U1-208ENST00000554698 LPAR1Q92633 364 aa25.27■■□□□ 1.64
SDR39U1-208ENST00000554698 STX8Q9UNK0 236 aa25.27■■□□□ 1.64
SDR39U1-208ENST00000554698 ZKSCAN1P17029 563 aaPredicted RBP25.26■■□□□ 1.63
SDR39U1-208ENST00000554698 RCSD1Q6JBY9 416 aa25.26■■□□□ 1.63
SDR39U1-208ENST00000554698 CYB5R4Q7L1T6 521 aa25.26■■□□□ 1.63
SDR39U1-208ENST00000554698 MB21D2Q8IYB1 491 aaPredicted RBP25.26■■□□□ 1.63
SDR39U1-208ENST00000554698 TTC14Q96N46 770 aa25.26■■□□□ 1.63
SDR39U1-208ENST00000554698 GOPCQ9HD26 462 aa25.26■■□□□ 1.63
SDR39U1-208ENST00000554698 HSPA1AP0DMV8 641 aaKnown RBP25.25■■□□□ 1.63
SDR39U1-208ENST00000554698 HSPA1BP0DMV9 641 aaKnown RBP25.25■■□□□ 1.63
SDR39U1-208ENST00000554698 HOXA7P31268 230 aaPredicted RBP25.25■■□□□ 1.63
SDR39U1-208ENST00000554698 PABPC4Q13310 644 aaKnown RBP eCLIP25.25■■□□□ 1.63
SDR39U1-208ENST00000554698 CCDC178Q5BJE1 867 aa25.25■■□□□ 1.63
SDR39U1-208ENST00000554698 ZSCAN10Q96SZ4 725 aaPredicted RBP25.25■■□□□ 1.63
SDR39U1-208ENST00000554698 ZKSCAN3Q9BRR0 538 aa25.25■■□□□ 1.63
SDR39U1-208ENST00000554698 CRHR2Q13324 411 aa25.24■■□□□ 1.63
SDR39U1-208ENST00000554698 TAF1CQ15572 869 aaPredicted RBP25.24■■□□□ 1.63
SDR39U1-208ENST00000554698 DGKHQ86XP1 1220 aa25.24■■□□□ 1.63
SDR39U1-208ENST00000554698 LRRC47Q8N1G4 583 aaKnown RBP25.24■■□□□ 1.63
SDR39U1-208ENST00000554698 GMCL1P1Q8NEA9 526 aa25.24■■□□□ 1.63
SDR39U1-208ENST00000554698 ANKS1AQ92625 1134 aa25.24■■□□□ 1.63
SDR39U1-208ENST00000554698 F5H6K3 240 aa25.23■■□□□ 1.63
SDR39U1-208ENST00000554698 SEC24BO95487 1268 aa25.23■■□□□ 1.63
SDR39U1-208ENST00000554698 KLRC3Q07444 240 aa25.23■■□□□ 1.63
SDR39U1-208ENST00000554698 KRT32Q14532 448 aa25.23■■□□□ 1.63
SDR39U1-208ENST00000554698 SPICE1Q8N0Z3 855 aa25.23■■□□□ 1.63
SDR39U1-208ENST00000554698 PARK7Q99497 189 aaKnown RBP25.23■■□□□ 1.63
SDR39U1-208ENST00000554698 UBAC1Q9BSL1 405 aa25.23■■□□□ 1.63
SDR39U1-208ENST00000554698 TNKSO95271 1327 aa25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 TBC1D8O95759 1140 aa25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 NDUFB10O96000 172 aa25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 TOP1P11387 765 aaKnown RBP25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 ANTXR2P58335 489 aa25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 ENAHQ8N8S7 591 aaPredicted RBP25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 TMEM47Q9BQJ4 181 aa25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 ASCC2Q9H1I8 757 aaPredicted RBP25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 R3HDMLQ9H3Y0 253 aa25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 RPAP3Q9H6T3 665 aaPredicted RBP25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 ZFYVE28Q9HCC9 887 aa25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 PNMA3Q9UL41 463 aa25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 SNX14Q9Y5W7 946 aa25.22■■□□□ 1.63
SDR39U1-208ENST00000554698 USP17L15C9J2P7 530 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 USP17L13C9JLJ4 530 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 USP17L11C9JVI0 530 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 USP17L18D6R9N7 530 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 USP17L22D6RA61 530 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 USP17L17D6RBQ6 530 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 USP17L19D6RCP7 530 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 USP17L20D6RJB6 530 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 WDR46O15213 610 aaKnown RBP25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 FOXN1O15353 648 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 CYP2C8P10632 490 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 USP17L24Q0WX57 530 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 COL9A3Q14050 684 aaPredicted RBP25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 ADCK5Q3MIX3 580 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 CATSPERGQ6ZRH7 1159 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 ADGRA2Q96PE1 1338 aa25.21■■□□□ 1.63
SDR39U1-208ENST00000554698 OSBPP22059 807 aa25.2■■□□□ 1.63
SDR39U1-208ENST00000554698 SEC23AQ15436 765 aa25.2■■□□□ 1.63
SDR39U1-208ENST00000554698 NEK1Q96PY6 1258 aa25.2■■□□□ 1.63
SDR39U1-208ENST00000554698 MTA3Q9BTC8 594 aa25.2■■□□□ 1.63
SDR39U1-208ENST00000554698 TLR2O60603 784 aa25.19■■□□□ 1.62
SDR39U1-208ENST00000554698 MCCP23508 829 aa25.19■■□□□ 1.62
SDR39U1-208ENST00000554698 MCM5P33992 734 aa25.19■■□□□ 1.62
SDR39U1-208ENST00000554698 IRX3P78415 501 aaPredicted RBP25.19■■□□□ 1.62
SDR39U1-208ENST00000554698 NOM1Q5C9Z4 860 aaKnown RBP25.19■■□□□ 1.62
SDR39U1-208ENST00000554698 GMCL1Q96IK5 515 aa25.19■■□□□ 1.62
SDR39U1-208ENST00000554698 TSKSQ9UJT2 592 aa25.19■■□□□ 1.62
SDR39U1-208ENST00000554698 RAD21O60216 631 aa25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 SLFN13Q68D06 897 aa25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 CHST3Q7LGC8 479 aa25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 IFIT3O14879 490 aaKnown RBP25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 PRC1O43663 620 aa25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 HSPA8P11142 646 aaKnown RBP25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 CTCFP49711 727 aaPredicted RBP25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 SART3Q15020 963 aaKnown RBP25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 FAM83BQ5T0W9 1011 aa25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 IGDCC4Q8TDY8 1250 aa25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 P2RX7Q99572 595 aaKnown RBP25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 TANGO6Q9C0B7 1094 aa25.18■■□□□ 1.62
SDR39U1-208ENST00000554698 HMGB1P09429 215 aaKnown RBP25.17■■□□□ 1.62
SDR39U1-208ENST00000554698 SMCR8Q8TEV9 937 aaPredicted RBP25.17■■□□□ 1.62
SDR39U1-208ENST00000554698 NUP88Q99567 741 aaPredicted RBP25.17■■□□□ 1.62
SDR39U1-208ENST00000554698 WDR19Q8NEZ3 1342 aa25.16■■□□□ 1.62
SDR39U1-208ENST00000554698 HERVK_113P62684 666 aa25.16■■□□□ 1.62
SDR39U1-208ENST00000554698 IFIT1BQ5T764 474 aaKnown RBP25.16■■□□□ 1.62
SDR39U1-208ENST00000554698 C17orf99Q6UX52 265 aa25.16■■□□□ 1.62
SDR39U1-208ENST00000554698 DHX32Q7L7V1 743 aaKnown RBP25.16■■□□□ 1.62
SDR39U1-208ENST00000554698 TMEM87BQ96K49 555 aa25.16■■□□□ 1.62
SDR39U1-208ENST00000554698 JAKMIP1Q96N16 626 aaKnown RBP25.16■■□□□ 1.62
SDR39U1-208ENST00000554698 KAT14Q9H8E8 782 aa25.16■■□□□ 1.62
SDR39U1-208ENST00000554698 MYH4Q9Y623 1939 aa25.16■■□□□ 1.62
SDR39U1-208ENST00000554698 ERICH2A1L162 156 aa25.15■■□□□ 1.62
SDR39U1-208ENST00000554698 GPR25O00155 361 aa25.15■■□□□ 1.62
SDR39U1-208ENST00000554698 GCLCP48506 637 aaPredicted RBP25.15■■□□□ 1.62
SDR39U1-208ENST00000554698 EXOSC10Q01780 885 aaKnown RBP25.15■■□□□ 1.62
SDR39U1-208ENST00000554698 COG2Q14746 738 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms