RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 KCNB2Q92953 911 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 YIPF2Q9BWQ6 316 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 ZFYVE1Q9HBF4 777 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 TMEM39AQ9NV64 488 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 ACEP12821 1306 aa5.9□□□□□ -1.47
VTI1B-203ENST00000554636 USP6P35125 1406 aa5.9□□□□□ -1.47
VTI1B-203ENST00000554636 SSH2Q76I76 1423 aa5.9□□□□□ -1.47
VTI1B-203ENST00000554636 PIK3C2AO00443 1686 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 PATL2C9JE40 543 aaKnown RBP5.89□□□□□ -1.47
VTI1B-203ENST00000554636 MED26O95402 600 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 GSTP1P09211 210 aaKnown RBP5.89□□□□□ -1.47
VTI1B-203ENST00000554636 ASPAP45381 313 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 PPP2R3AQ06190 1150 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 SULF2Q8IWU5 870 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 TBC1D32Q96NH3 1257 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 OSBPL7Q9BZF2 842 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 CBX8Q9HC52 389 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 PPP1R9AQ9ULJ8 1098 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 DAGLAQ9Y4D2 1042 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 BRWD3Q6RI45 1802 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 USP19O94966 1318 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 SLIT3O75094 1523 aa5.89□□□□□ -1.47
VTI1B-203ENST00000554636 LMO7Q8WWI1 1683 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 MON2Q7Z3U7 1717 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 EP400Q96L91 3159 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 FAM83GA6ND36 823 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 ZNF862O60290 1169 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 COBLO75128 1261 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 F13BP05160 661 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 LDHBP07195 334 aaKnown RBP5.88□□□□□ -1.47
VTI1B-203ENST00000554636 ADMP35318 185 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 CD97P48960 835 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 VPS72Q15906 364 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 MAP1SQ66K74 1059 aaPredicted RBP5.88□□□□□ -1.47
VTI1B-203ENST00000554636 ALG1LQ6GMV1 187 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 SLC51AQ86UW1 340 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 FBF1Q8TES7 1133 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 OSBPL1AQ9BXW6 950 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 SEMA6CQ9H3T2 930 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 ATG3Q9NT62 314 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 EVC2Q86UK5 1308 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 BRD4O60885 1362 aaPredicted RBP5.88□□□□□ -1.47
VTI1B-203ENST00000554636 KIAA0232Q92628 1395 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 THSD7AQ9UPZ6 1657 aa5.88□□□□□ -1.47
VTI1B-203ENST00000554636 PRR19A6NJB7 356 aa5.87□□□□□ -1.47
VTI1B-203ENST00000554636 XRCC5P13010 732 aaKnown RBP5.87□□□□□ -1.47
VTI1B-203ENST00000554636 GSTT1P30711 240 aa5.87□□□□□ -1.47
VTI1B-203ENST00000554636 HOXA10P31260 410 aaPredicted RBP5.87□□□□□ -1.47
VTI1B-203ENST00000554636 GRIK1P39086 918 aa5.87□□□□□ -1.47
VTI1B-203ENST00000554636 SND1Q7KZF4 910 aaKnown RBP eCLIP5.87□□□□□ -1.47
VTI1B-203ENST00000554636 C3orf58Q8NDZ4 430 aa5.87□□□□□ -1.47
VTI1B-203ENST00000554636 ACSBG1Q96GR2 724 aa5.87□□□□□ -1.47
VTI1B-203ENST00000554636 CARD11Q9BXL7 1154 aa5.87□□□□□ -1.47
VTI1B-203ENST00000554636 PIDD1Q9HB75 910 aa5.87□□□□□ -1.47
VTI1B-203ENST00000554636 PRKAG2Q9UGJ0 569 aa5.87□□□□□ -1.47
VTI1B-203ENST00000554636 CPSF1Q10570 1443 aaKnown RBP5.87□□□□□ -1.47
VTI1B-203ENST00000554636 CD163L1Q9NR16 1453 aa5.87□□□□□ -1.47
VTI1B-203ENST00000554636 USP54Q70EL1 1684 aa5.87□□□□□ -1.47
VTI1B-203ENST00000554636 CPDO75976 1380 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 FAM170BA6NMN3 283 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 TMPRSS2O15393 492 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 DYNC1LI2O43237 492 aaPredicted RBP5.86□□□□□ -1.47
VTI1B-203ENST00000554636 PAGE1O75459 146 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 ID3Q02535 119 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 MAP7Q14244 749 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 MPRIPQ6WCQ1 1025 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 GIMAP7Q8NHV1 300 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 LRRC4CQ9HCJ2 640 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 RNF19AQ9NV58 838 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 SPG7Q9UQ90 795 aa5.86□□□□□ -1.47
VTI1B-203ENST00000554636 COL18A1P39060 1754 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 CAMTA1Q9Y6Y1 1673 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 SPATA31A5Q5VU36 1347 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 SPATA31A7Q8IWB4 1347 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.85□□□□□ -1.47
VTI1B-203ENST00000554636 ANKRD33BA6NCL7 494 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 RNGTTO60942 597 aaKnown RBP5.85□□□□□ -1.47
VTI1B-203ENST00000554636 USP17L7P0C7H9 530 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 SLFN14P0C7P3 912 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 HCLS1P14317 486 aaPredicted RBP5.85□□□□□ -1.47
VTI1B-203ENST00000554636 ARNTP27540 789 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 CHRNA2Q15822 529 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 ZAR1Q86SH2 424 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 PDZD3Q86UT5 571 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 EZH1Q92800 747 aaPredicted RBP5.85□□□□□ -1.47
VTI1B-203ENST00000554636 FANCD2OSQ96PS1 177 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 TESK2Q96S53 571 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 ACSS3Q9H6R3 686 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 C12orf49Q9H741 205 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 PRDM11Q9NQV5 511 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 BTG4Q9NY30 223 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 PIM2Q9P1W9 311 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 LEMD3Q9Y2U8 911 aa5.85□□□□□ -1.47
VTI1B-203ENST00000554636 NFAT5O94916 1531 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 COL5A2P05997 1499 aaPredicted RBP5.84□□□□□ -1.47
VTI1B-203ENST00000554636 USP47Q96K76 1375 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 TTC21BQ7Z4L5 1316 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 CLSPNQ9HAW4 1339 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 ENC1O14682 589 aa5.84□□□□□ -1.47
VTI1B-203ENST00000554636 CELA3AP09093 270 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms