RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 MAP2K5Q13163 448 aa12.88□□□□□ -0.35
PNN-203ENST00000554117 SHROOM1Q2M3G4 852 aaPredicted RBP12.88□□□□□ -0.35
PNN-203ENST00000554117 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
PNN-203ENST00000554117 LBX2Q6XYB7 198 aa12.88□□□□□ -0.35
PNN-203ENST00000554117 TRIB2Q92519 343 aa12.88□□□□□ -0.35
PNN-203ENST00000554117 PAWRQ96IZ0 340 aaKnown RBP12.88□□□□□ -0.35
PNN-203ENST00000554117 C11orf49Q9H6J7 331 aa12.88□□□□□ -0.35
PNN-203ENST00000554117 GJD2Q9UKL4 321 aa12.88□□□□□ -0.35
PNN-203ENST00000554117 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
PNN-203ENST00000554117 MKI67P46013 3256 aaKnown RBP12.87□□□□□ -0.35
PNN-203ENST00000554117 USP17L12C9JPN9 530 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 USP17L21D6R901 530 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
PNN-203ENST00000554117 STRNO43815 780 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 SMARCA5O60264 1052 aaPredicted RBP12.87□□□□□ -0.35
PNN-203ENST00000554117 FLOT1O75955 427 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 CNGA1P29973 690 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 TDO2P48775 406 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 ACER1Q8TDN7 264 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 CRISPLD2Q9H0B8 497 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 PORCNQ9H237 461 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 TXNRD2Q9NNW7 524 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 TTC41PQ6P2S7 1318 aa12.87□□□□□ -0.35
PNN-203ENST00000554117 PTPREP23469 700 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 COPB2P35606 906 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 CDK8P49336 464 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 Q3C1V9 767 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 C12orf60Q5U649 245 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 GIMAP6Q6P9H5 292 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 C16orf86Q6ZW13 317 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 KBTBD3Q8NAB2 608 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 APPBP2Q92624 585 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 MROH8Q9H579 483 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 DCTPP1Q9H773 170 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 VCPKMTQ9H867 229 aa12.86□□□□□ -0.35
PNN-203ENST00000554117 SPDYE16A6NNV3 312 aaPredicted RBP12.85□□□□□ -0.35
PNN-203ENST00000554117 MINDY4BA8MYZ0 360 aa12.85□□□□□ -0.35
PNN-203ENST00000554117 MORN1Q5T089 497 aa12.85□□□□□ -0.35
PNN-203ENST00000554117 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
PNN-203ENST00000554117 NCAPG2Q86XI2 1143 aa12.85□□□□□ -0.35
PNN-203ENST00000554117 ZNF444Q8N0Y2 327 aaPredicted RBP12.85□□□□□ -0.35
PNN-203ENST00000554117 SHCBP1Q8NEM2 672 aa12.85□□□□□ -0.35
PNN-203ENST00000554117 DYNLL2Q96FJ2 89 aa12.85□□□□□ -0.35
PNN-203ENST00000554117 SPATC1LQ9H0A9 340 aa12.85□□□□□ -0.35
PNN-203ENST00000554117 TMX2Q9Y320 296 aa12.85□□□□□ -0.35
PNN-203ENST00000554117 LAMA4Q16363 1823 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 A0A1W2PPC1 479 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 RNF113AO15541 343 aaKnown RBP12.84□□□□□ -0.35
PNN-203ENST00000554117 PRKAB2O43741 272 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 SLC25A27O95847 323 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 CYP2D6P10635 497 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 AKR1B1P15121 316 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 PDE4BQ07343 736 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 CACNB2Q08289 660 aaPredicted RBP12.84□□□□□ -0.35
PNN-203ENST00000554117 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 UBE2Q1Q7Z7E8 422 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 C7orf61Q8IZ16 206 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 SLC44A5Q8NCS7 719 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 FSD1Q9BTV5 496 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 OGDHLQ9ULD0 1010 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 CEP290O15078 2479 aa12.84□□□□□ -0.35
PNN-203ENST00000554117 FCER1AP12319 257 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 EEF2P13639 858 aaKnown RBP12.83□□□□□ -0.36
PNN-203ENST00000554117 DSG3P32926 999 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 GUCY1A2P33402 732 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 TRIM32Q13049 653 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 GRB14Q14449 540 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 SBK1Q52WX2 424 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 MAP3K21Q5TCX8 1036 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 CTR9Q6PD62 1173 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 SPICE1Q8N0Z3 855 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 PUS7LQ9H0K6 701 aaKnown RBP12.83□□□□□ -0.36
PNN-203ENST00000554117 BTBD7Q9P203 1132 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 PRKAG2Q9UGJ0 569 aa12.83□□□□□ -0.36
PNN-203ENST00000554117 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
PNN-203ENST00000554117 KBTBD13C9JR72 458 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 GPAA1O43292 621 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 PEX10O60683 326 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 ERCC3P19447 782 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 ADORA2AP29274 412 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 KCTD2Q14681 263 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 ABRAQ8N0Z2 381 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 ARRDC4Q8NCT1 418 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 USP6NLQ92738 828 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 MOV10L1Q9BXT6 1211 aaKnown RBP12.82□□□□□ -0.36
PNN-203ENST00000554117 NAPBQ9H115 298 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 LTBP2Q14767 1821 aa12.82□□□□□ -0.36
PNN-203ENST00000554117 CYP2D7A0A087X1C5 515 aa12.81□□□□□ -0.36
PNN-203ENST00000554117 A0A1W2PRG0 241 aa12.81□□□□□ -0.36
PNN-203ENST00000554117 PATL2C9JE40 543 aaKnown RBP12.81□□□□□ -0.36
PNN-203ENST00000554117 CNMDO75829 334 aa12.81□□□□□ -0.36
PNN-203ENST00000554117 HOXC6P09630 235 aa12.81□□□□□ -0.36
PNN-203ENST00000554117 TSPY3P0CV98 308 aa12.81□□□□□ -0.36
PNN-203ENST00000554117 TSPY8P0CW00 308 aa12.81□□□□□ -0.36
PNN-203ENST00000554117 MX1P20591 662 aa12.81□□□□□ -0.36
PNN-203ENST00000554117 CCND3P30281 292 aaPredicted RBP12.81□□□□□ -0.36
PNN-203ENST00000554117 FXR1P51114 621 aaKnown RBP eCLIP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms