RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 RBBP6Q7Z6E9 1792 aaKnown RBP24.65■■□□□ 1.54
HIF1A-206ENST00000553999 SPDYE16A6NNV3 312 aaPredicted RBP24.65■■□□□ 1.54
HIF1A-206ENST00000553999 PATL2C9JE40 543 aaKnown RBP24.65■■□□□ 1.54
HIF1A-206ENST00000553999 SBK1Q52WX2 424 aa24.65■■□□□ 1.54
HIF1A-206ENST00000553999 FAM227BQ96M60 508 aa24.65■■□□□ 1.54
HIF1A-206ENST00000553999 BTBD7Q9P203 1132 aa24.65■■□□□ 1.54
HIF1A-206ENST00000553999 KIAA0100Q14667 2235 aaKnown RBP24.64■■□□□ 1.54
HIF1A-206ENST00000553999 TRIM32Q13049 653 aa24.64■■□□□ 1.54
HIF1A-206ENST00000553999 VPS53Q5VIR6 699 aa24.64■■□□□ 1.54
HIF1A-206ENST00000553999 GIMAP6Q6P9H5 292 aa24.64■■□□□ 1.54
HIF1A-206ENST00000553999 NACAP1Q9BZK3 213 aa24.64■■□□□ 1.54
HIF1A-206ENST00000553999 DOCK3Q8IZD9 2030 aa24.63■■□□□ 1.53
HIF1A-206ENST00000553999 CENPFP49454 3210 aa24.63■■□□□ 1.53
HIF1A-206ENST00000553999 A0A0D9SFI3 127 aa24.63■■□□□ 1.53
HIF1A-206ENST00000553999 NUCB1Q02818 461 aa24.63■■□□□ 1.53
HIF1A-206ENST00000553999 CHMP4CQ96CF2 233 aa24.63■■□□□ 1.53
HIF1A-206ENST00000553999 SHISA4Q96DD7 197 aa24.63■■□□□ 1.53
HIF1A-206ENST00000553999 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.63■■□□□ 1.53
HIF1A-206ENST00000553999 VCPKMTQ9H867 229 aa24.63■■□□□ 1.53
HIF1A-206ENST00000553999 ROBO3Q96MS0 1386 aa24.63■■□□□ 1.53
HIF1A-206ENST00000553999 FLOT1O75955 427 aa24.62■■□□□ 1.53
HIF1A-206ENST00000553999 NMIQ13287 307 aaPredicted RBP24.62■■□□□ 1.53
HIF1A-206ENST00000553999 IRF5Q13568 498 aa24.62■■□□□ 1.53
HIF1A-206ENST00000553999 PLS1Q14651 629 aa24.62■■□□□ 1.53
HIF1A-206ENST00000553999 GPR142Q7Z601 462 aa24.62■■□□□ 1.53
HIF1A-206ENST00000553999 PLEKHM2Q8IWE5 1019 aa24.62■■□□□ 1.53
HIF1A-206ENST00000553999 GTF3C2Q8WUA4 911 aaPredicted RBP24.62■■□□□ 1.53
HIF1A-206ENST00000553999 SH2D4AQ9H788 454 aa24.62■■□□□ 1.53
HIF1A-206ENST00000553999 KANSL2Q9H9L4 492 aa24.62■■□□□ 1.53
HIF1A-206ENST00000553999 GJD2Q9UKL4 321 aa24.62■■□□□ 1.53
HIF1A-206ENST00000553999 TMX2Q9Y320 296 aa24.62■■□□□ 1.53
HIF1A-206ENST00000553999 FOXP2O15409 715 aa24.61■■□□□ 1.53
HIF1A-206ENST00000553999 MAPK4P31152 587 aa24.61■■□□□ 1.53
HIF1A-206ENST00000553999 CTDSPL2Q05D32 466 aa24.61■■□□□ 1.53
HIF1A-206ENST00000553999 PPARAQ07869 468 aa24.61■■□□□ 1.53
HIF1A-206ENST00000553999 FAM47AQ5JRC9 791 aa24.61■■□□□ 1.53
HIF1A-206ENST00000553999 ATG4CQ96DT6 458 aa24.61■■□□□ 1.53
HIF1A-206ENST00000553999 NUP88Q99567 741 aaPredicted RBP24.61■■□□□ 1.53
HIF1A-206ENST00000553999 INCENPQ9NQS7 918 aa24.61■■□□□ 1.53
HIF1A-206ENST00000553999 RABGAP1Q9Y3P9 1069 aa24.61■■□□□ 1.53
HIF1A-206ENST00000553999 FAM83BQ5T0W9 1011 aa24.6■■□□□ 1.53
HIF1A-206ENST00000553999 PLEKHH3Q7Z736 793 aa24.6■■□□□ 1.53
HIF1A-206ENST00000553999 NUDT12Q9BQG2 462 aa24.6■■□□□ 1.53
HIF1A-206ENST00000553999 FBXO28Q9NVF7 368 aa24.6■■□□□ 1.53
HIF1A-206ENST00000553999 PLXNB2O15031 1838 aa24.6■■□□□ 1.53
HIF1A-206ENST00000553999 TNRC18O15417 2968 aaPredicted RBP24.59■■□□□ 1.53
HIF1A-206ENST00000553999 COG2Q14746 738 aa24.59■■□□□ 1.53
HIF1A-206ENST00000553999 CCL14Q16627 93 aa24.59■■□□□ 1.53
HIF1A-206ENST00000553999 ZNF444Q8N0Y2 327 aaPredicted RBP24.59■■□□□ 1.53
HIF1A-206ENST00000553999 PXYLP1Q8TE99 480 aa24.59■■□□□ 1.53
HIF1A-206ENST00000553999 TRIB2Q92519 343 aa24.59■■□□□ 1.53
HIF1A-206ENST00000553999 DEFB118Q96PH6 123 aa24.59■■□□□ 1.53
HIF1A-206ENST00000553999 CCNA1P78396 465 aa24.58■■□□□ 1.53
HIF1A-206ENST00000553999 ZNF589Q86UQ0 364 aaPredicted RBP24.58■■□□□ 1.53
HIF1A-206ENST00000553999 LRRC47Q8N1G4 583 aaKnown RBP24.58■■□□□ 1.53
HIF1A-206ENST00000553999 LPAR1Q92633 364 aa24.58■■□□□ 1.53
HIF1A-206ENST00000553999 GOPCQ9HD26 462 aa24.58■■□□□ 1.53
HIF1A-206ENST00000553999 CLIP2Q9UDT6 1046 aa24.58■■□□□ 1.53
HIF1A-206ENST00000553999 ISY1Q9ULR0 285 aaKnown RBP24.58■■□□□ 1.53
HIF1A-206ENST00000553999 HMGCRP04035 888 aa24.57■■□□□ 1.52
HIF1A-206ENST00000553999 U2AF1L4Q8WU68 220 aaKnown RBP24.57■■□□□ 1.52
HIF1A-206ENST00000553999 SOCS4Q8WXH5 440 aa24.57■■□□□ 1.52
HIF1A-206ENST00000553999 WDR46O15213 610 aaKnown RBP24.56■■□□□ 1.52
HIF1A-206ENST00000553999 GJB1P08034 283 aa24.56■■□□□ 1.52
HIF1A-206ENST00000553999 TSPY3P0CV98 308 aa24.56■■□□□ 1.52
HIF1A-206ENST00000553999 TSPY8P0CW00 308 aa24.56■■□□□ 1.52
HIF1A-206ENST00000553999 DSG3P32926 999 aa24.56■■□□□ 1.52
HIF1A-206ENST00000553999 CEP95Q96GE4 821 aa24.56■■□□□ 1.52
HIF1A-206ENST00000553999 MOV10L1Q9BXT6 1211 aaKnown RBP24.56■■□□□ 1.52
HIF1A-206ENST00000553999 HELLSQ9NRZ9 838 aa24.56■■□□□ 1.52
HIF1A-206ENST00000553999 GREB1LQ9C091 1923 aaPredicted RBP24.56■■□□□ 1.52
HIF1A-206ENST00000553999 SLC3A2P08195 630 aaKnown RBP24.55■■□□□ 1.52
HIF1A-206ENST00000553999 ZKSCAN1P17029 563 aaPredicted RBP24.55■■□□□ 1.52
HIF1A-206ENST00000553999 RGS2P41220 211 aa24.55■■□□□ 1.52
HIF1A-206ENST00000553999 TFAP4Q01664 338 aa24.55■■□□□ 1.52
HIF1A-206ENST00000553999 PDE4BQ07343 736 aa24.55■■□□□ 1.52
HIF1A-206ENST00000553999 MORN1Q5T089 497 aa24.55■■□□□ 1.52
HIF1A-206ENST00000553999 LBX2Q6XYB7 198 aa24.55■■□□□ 1.52
HIF1A-206ENST00000553999 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.55■■□□□ 1.52
HIF1A-206ENST00000553999 TOMM22Q9NS69 142 aa24.55■■□□□ 1.52
HIF1A-206ENST00000553999 TACC3Q9Y6A5 838 aa24.55■■□□□ 1.52
HIF1A-206ENST00000553999 IVNS1ABPQ9Y6Y0 642 aa24.55■■□□□ 1.52
HIF1A-206ENST00000553999 PDE4AP27815 886 aa24.54■■□□□ 1.52
HIF1A-206ENST00000553999 GJA8P48165 433 aa24.54■■□□□ 1.52
HIF1A-206ENST00000553999 HAND2P61296 217 aa24.54■■□□□ 1.52
HIF1A-206ENST00000553999 MCMDC2Q4G0Z9 681 aa24.54■■□□□ 1.52
HIF1A-206ENST00000553999 NCAPG2Q86XI2 1143 aa24.54■■□□□ 1.52
HIF1A-206ENST00000553999 SPATC1LQ9H0A9 340 aa24.54■■□□□ 1.52
HIF1A-206ENST00000553999 ZNF287Q9HBT7 754 aa24.54■■□□□ 1.52
HIF1A-206ENST00000553999 HOXC10Q9NYD6 342 aa24.54■■□□□ 1.52
HIF1A-206ENST00000553999 MTMR7Q9Y216 660 aa24.54■■□□□ 1.52
HIF1A-206ENST00000553999 NDUFB10O96000 172 aa24.53■■□□□ 1.52
HIF1A-206ENST00000553999 TFRCP02786 760 aaKnown RBP24.53■■□□□ 1.52
HIF1A-206ENST00000553999 PRKAR2AP13861 404 aaKnown RBP24.53■■□□□ 1.52
HIF1A-206ENST00000553999 ERCC3P19447 782 aa24.53■■□□□ 1.52
HIF1A-206ENST00000553999 SDSP20132 328 aa24.53■■□□□ 1.52
HIF1A-206ENST00000553999 SLC4A3P48751 1232 aa24.53■■□□□ 1.52
HIF1A-206ENST00000553999 RRP12Q5JTH9 1297 aaKnown RBP24.53■■□□□ 1.52
HIF1A-206ENST00000553999 APBA2Q99767 749 aa24.53■■□□□ 1.52
HIF1A-206ENST00000553999 RLFQ13129 1914 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms