RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 CCT6AP40227 531 aaKnown RBP19.86■□□□□ 0.77
SYNE3-202ENST00000553340 ABHD10Q9NUJ1 306 aa19.86■□□□□ 0.77
SYNE3-202ENST00000553340 CTNND2Q9UQB3 1225 aa19.86■□□□□ 0.77
SYNE3-202ENST00000553340 DCCP43146 1447 aa19.86■□□□□ 0.77
SYNE3-202ENST00000553340 CYP26C1Q6V0L0 522 aa19.86■□□□□ 0.77
SYNE3-202ENST00000553340 PHF20Q9BVI0 1012 aa19.86■□□□□ 0.77
SYNE3-202ENST00000553340 LIMA1Q9UHB6 759 aaKnown RBP19.86■□□□□ 0.77
SYNE3-202ENST00000553340 ASAP1Q9ULH1 1129 aa19.86■□□□□ 0.77
SYNE3-202ENST00000553340 MYH6P13533 1939 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 SPAG1Q07617 926 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 KRT31Q15323 416 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 LEKR1Q6ZMV7 388 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 DOCK2Q92608 1830 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 LRRC10BA6NIK2 292 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 ERVK-24P63145 666 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 PPARAQ07869 468 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 TRIM14Q14142 442 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 IQUBQ8NA54 791 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 ANKRD20A12PQ8NF67 263 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 SHISA4Q96DD7 197 aa19.85■□□□□ 0.77
SYNE3-202ENST00000553340 NUP88Q99567 741 aaPredicted RBP19.85■□□□□ 0.77
SYNE3-202ENST00000553340 VSNL1P62760 191 aa19.84■□□□□ 0.77
SYNE3-202ENST00000553340 EARS2Q5JPH6 523 aaKnown RBP19.84■□□□□ 0.77
SYNE3-202ENST00000553340 ESR2Q92731 530 aa19.84■□□□□ 0.77
SYNE3-202ENST00000553340 CARD10Q9BWT7 1032 aa19.84■□□□□ 0.77
SYNE3-202ENST00000553340 BRMS1Q9HCU9 246 aa19.84■□□□□ 0.77
SYNE3-202ENST00000553340 TNKSO95271 1327 aa19.84■□□□□ 0.77
SYNE3-202ENST00000553340 PKN1Q16512 942 aa19.84■□□□□ 0.77
SYNE3-202ENST00000553340 CADPS2Q86UW7 1296 aa19.84■□□□□ 0.77
SYNE3-202ENST00000553340 SUGCTQ9HAC7 445 aa19.84■□□□□ 0.77
SYNE3-202ENST00000553340 MYH8P13535 1937 aa19.83■□□□□ 0.77
SYNE3-202ENST00000553340 ARHGAP25P42331 645 aa19.83■□□□□ 0.77
SYNE3-202ENST00000553340 CASP8Q14790 479 aa19.83■□□□□ 0.77
SYNE3-202ENST00000553340 SEC23AQ15436 765 aa19.83■□□□□ 0.77
SYNE3-202ENST00000553340 HSP90B2PQ58FF3 399 aa19.83■□□□□ 0.77
SYNE3-202ENST00000553340 RRAGBQ5VZM2 374 aa19.83■□□□□ 0.77
SYNE3-202ENST00000553340 RWDD2AQ9UIY3 292 aa19.83■□□□□ 0.77
SYNE3-202ENST00000553340 ARAP2Q8WZ64 1704 aa19.83■□□□□ 0.77
SYNE3-202ENST00000553340 PRPF3O43395 683 aaKnown RBP19.83■□□□□ 0.76
SYNE3-202ENST00000553340 ABL1P00519 1130 aa19.83■□□□□ 0.76
SYNE3-202ENST00000553340 ZNF174Q15697 407 aa19.83■□□□□ 0.76
SYNE3-202ENST00000553340 MIGA1Q8NAN2 632 aa19.83■□□□□ 0.76
SYNE3-202ENST00000553340 VPS16Q9H269 839 aa19.83■□□□□ 0.76
SYNE3-202ENST00000553340 ACBD3Q9H3P7 528 aa19.83■□□□□ 0.76
SYNE3-202ENST00000553340 MYO6Q9UM54 1294 aa19.83■□□□□ 0.76
SYNE3-202ENST00000553340 COL5A2P05997 1499 aaPredicted RBP19.83■□□□□ 0.76
SYNE3-202ENST00000553340 TFRCP02786 760 aaKnown RBP19.82■□□□□ 0.76
SYNE3-202ENST00000553340 COPB1P53618 953 aaKnown RBP19.82■□□□□ 0.76
SYNE3-202ENST00000553340 STAMQ92783 540 aa19.82■□□□□ 0.76
SYNE3-202ENST00000553340 BCL9LQ86UU0 1499 aa19.82■□□□□ 0.76
SYNE3-202ENST00000553340 IVLP07476 585 aa19.82■□□□□ 0.76
SYNE3-202ENST00000553340 TTC38Q5R3I4 469 aa19.82■□□□□ 0.76
SYNE3-202ENST00000553340 PYM1Q9BRP8 204 aaKnown RBP19.82■□□□□ 0.76
SYNE3-202ENST00000553340 SHANK3Q9BYB0 1731 aa19.82■□□□□ 0.76
SYNE3-202ENST00000553340 FAN1Q9Y2M0 1017 aa19.82■□□□□ 0.76
SYNE3-202ENST00000553340 V9GY48 417 aaPredicted RBP19.82■□□□□ 0.76
SYNE3-202ENST00000553340 XDHP47989 1333 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 MINDY4BA8MYZ0 360 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 N4BP1O75113 896 aaKnown RBP19.81■□□□□ 0.76
SYNE3-202ENST00000553340 PRDM1O75626 825 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 KRT9P35527 623 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 PAK1Q13153 545 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 WWC2Q6AWC2 1192 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 FAM71BQ8TC56 605 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 PIGBQ92521 554 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 SLF1Q9BQI6 1058 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 LRP2BPQ9P2M1 347 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 MYO1CO00159 1063 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 SNAP23O00161 211 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 COBLO75128 1261 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 PTGDRQ13258 359 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 CCDC102AQ96A19 550 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 BLZF1Q9H2G9 400 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 RASSF4Q9H2L5 321 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 TAB2Q9NYJ8 693 aa19.81■□□□□ 0.76
SYNE3-202ENST00000553340 BCORQ6W2J9 1755 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 hCG_1642624A0A1W2PR95 340 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 WNT7AO00755 349 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 CDC25AP30304 524 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 ATP2C1P98194 919 aaPredicted RBP19.8■□□□□ 0.76
SYNE3-202ENST00000553340 AMPD2Q01433 879 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 FUT2Q10981 343 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 TCP11X2Q5H9J9 407 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 WDR93Q6P2C0 686 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 CATIPQ7Z7H3 387 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 ANKRD36CQ5JPF3 1778 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 TOGARAM1Q9Y4F4 1720 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 LRP5O75197 1615 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 KCNJ18B7U540 433 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 RNF225M0QZC1 329 aaPredicted RBP19.8■□□□□ 0.76
SYNE3-202ENST00000553340 KCNJ12Q14500 433 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 E2F4Q16254 413 aa19.8■□□□□ 0.76
SYNE3-202ENST00000553340 NOA1Q8NC60 698 aaKnown RBP19.8■□□□□ 0.76
SYNE3-202ENST00000553340 RBM28Q9NW13 759 aaKnown RBP19.8■□□□□ 0.76
SYNE3-202ENST00000553340 GTPBP6O43824 516 aaPredicted RBP19.79■□□□□ 0.76
SYNE3-202ENST00000553340 SRLQ86TD4 932 aa19.79■□□□□ 0.76
SYNE3-202ENST00000553340 ENAHQ8N8S7 591 aaPredicted RBP19.79■□□□□ 0.76
SYNE3-202ENST00000553340 CCDC148Q8NFR7 591 aa19.79■□□□□ 0.76
SYNE3-202ENST00000553340 ZSCAN10Q96SZ4 725 aaPredicted RBP19.79■□□□□ 0.76
SYNE3-202ENST00000553340 TRIM34Q9BYJ4 488 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms