RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TMEM63CQ9P1W3 806 aa22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 KCNJ14Q9UNX9 436 aa22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 NBPF9Q3BBW0 867 aa22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 RBM27Q9P2N5 1060 aaKnown RBP22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 RCOR1Q9UKL0 485 aa22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 TTLL1O95922 423 aa22.62■■□□□ 1.21
RBFOX1-215ENST00000553186 GREB1LQ9C091 1923 aaPredicted RBP22.62■■□□□ 1.21
RBFOX1-215ENST00000553186 EIF6P56537 245 aaKnown RBP22.62■■□□□ 1.21
RBFOX1-215ENST00000553186 CERKLQ49MI3 558 aaPredicted RBP22.62■■□□□ 1.21
RBFOX1-215ENST00000553186 MTMR7Q9Y216 660 aa22.62■■□□□ 1.21
RBFOX1-215ENST00000553186 CYTH3O43739 400 aa22.61■■□□□ 1.21
RBFOX1-215ENST00000553186 CEBPZQ03701 1054 aaKnown RBP22.61■■□□□ 1.21
RBFOX1-215ENST00000553186 SHROOM1Q2M3G4 852 aaPredicted RBP22.61■■□□□ 1.21
RBFOX1-215ENST00000553186 DPF2Q92785 391 aa22.61■■□□□ 1.21
RBFOX1-215ENST00000553186 VPS54Q9P1Q0 977 aa22.61■■□□□ 1.21
RBFOX1-215ENST00000553186 CLIP2Q9UDT6 1046 aa22.61■■□□□ 1.21
RBFOX1-215ENST00000553186 BTBD18B2RXH4 712 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 MPHOSPH10O00566 681 aaKnown RBP22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 EGFRP00533 1210 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 GMPSP49915 693 aaPredicted RBP22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 DIS3L2Q8IYB7 885 aaKnown RBP22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 TRIM34Q9BYJ4 488 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 VEZTQ9HBM0 779 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 RTEL1Q9NZ71 1219 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 MYH8P13535 1937 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 MYO1BO43795 1136 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 GOLGA8HP0CJ92 632 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 VEGFAP15692 232 aaPredicted RBP22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 PFKFB3Q16875 520 aaPredicted RBP22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 USP17L2Q6R6M4 530 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 FAM83AQ86UY5 434 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 PGBD1Q96JS3 809 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 LZTS2Q9BRK4 669 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 PHF20Q9BVI0 1012 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 MYH15Q9Y2K3 1946 aa22.6■■□□□ 1.21
RBFOX1-215ENST00000553186 PARP1P09874 1014 aaKnown RBP22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 SNHG28P0DPA3 235 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 PDHBP11177 359 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 SCG2P13521 617 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 ZSCAN23Q3MJ62 389 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 LRRC47Q8N1G4 583 aaKnown RBP22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 FOXP1Q9H334 677 aaPredicted RBP22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 POLR3EQ9NVU0 708 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 HERC5Q9UII4 1024 aaKnown RBP22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 ZNF541Q9H0D2 1346 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 USP17L5A8MUK1 530 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 KLRF2D3W0D1 207 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 XBP1P17861 261 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 SAFBQ15424 915 aaKnown RBP eCLIP22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 NOSTRINQ8IVI9 506 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 PGAP2Q9UHJ9 254 aa22.59■■□□□ 1.21
RBFOX1-215ENST00000553186 RRP1BQ14684 758 aaKnown RBP22.58■■□□□ 1.21
RBFOX1-215ENST00000553186 ARHGAP27Q6ZUM4 889 aa22.58■■□□□ 1.21
RBFOX1-215ENST00000553186 CLIC4Q9Y696 253 aa22.58■■□□□ 1.21
RBFOX1-215ENST00000553186 GJA3Q9Y6H8 435 aa22.58■■□□□ 1.21
RBFOX1-215ENST00000553186 DEKP35659 375 aaKnown RBP22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 NASPP49321 788 aaPredicted RBP22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 GNL2Q13823 731 aaKnown RBP22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 NPY5RQ15761 445 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 TPRNQ4KMQ1 711 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 PPP4R3BQ5MIZ7 849 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 CDAN1Q8IWY9 1227 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 MICALL2Q8IY33 904 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 SYT17Q9BSW7 474 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 SPZ1Q9BXG8 430 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 TMEM39BQ9GZU3 492 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 KANSL2Q9H9L4 492 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 BAZ2BQ9UIF8 2168 aaKnown RBP22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 JAG1P78504 1218 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 TMEM179Q6ZVK1 233 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 SIAH1Q8IUQ4 282 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 LINC00301Q8NCQ3 95 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 OXER1Q8TDS5 423 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 PIBF1Q8WXW3 757 aa22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 CNOT7Q9UIV1 285 aaKnown RBP22.57■■□□□ 1.2
RBFOX1-215ENST00000553186 LMNB1P20700 586 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 SMARCA1P28370 1054 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 NR5A1Q13285 461 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 ILDR2Q71H61 639 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 MKL1Q969V6 931 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 NYAP2Q9P242 653 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 MYH6P13533 1939 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 GDF11O95390 407 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 SEPT2Q15019 361 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 ABCB5Q2M3G0 1257 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 CPVLQ9H3G5 476 aa22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.56■■□□□ 1.2
RBFOX1-215ENST00000553186 YEATS4O95619 227 aa22.55■■□□□ 1.2
RBFOX1-215ENST00000553186 EEF2P13639 858 aaKnown RBP22.55■■□□□ 1.2
RBFOX1-215ENST00000553186 ZNF445P59923 1031 aa22.55■■□□□ 1.2
RBFOX1-215ENST00000553186 RBM26Q5T8P6 1007 aaKnown RBP22.55■■□□□ 1.2
RBFOX1-215ENST00000553186 ANO1Q5XXA6 986 aa22.55■■□□□ 1.2
RBFOX1-215ENST00000553186 SAMD7Q7Z3H4 446 aa22.55■■□□□ 1.2
RBFOX1-215ENST00000553186 ASPRV1Q53RT3 343 aa22.55■■□□□ 1.2
RBFOX1-215ENST00000553186 FSD2A1L4K1 749 aa22.54■■□□□ 1.2
RBFOX1-215ENST00000553186 TBC1D12O60347 775 aa22.54■■□□□ 1.2
RBFOX1-215ENST00000553186 SYAP1Q96A49 352 aaPredicted RBP22.54■■□□□ 1.2
RBFOX1-215ENST00000553186 GOLGA6L4A6NEF3 574 aa22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 GH2P01242 217 aa22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 ATP2B2Q01814 1243 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms