RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 USP17L2Q6R6M4 530 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 NOSTRINQ8IVI9 506 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 NLGN2Q8NFZ4 835 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 TAOK3Q9H2K8 898 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 FER1L6Q2WGJ9 1857 aa22.75■■□□□ 1.23
SSH1-209ENST00000551165 FAM205CA6NFA0 338 aa22.75■■□□□ 1.23
SSH1-209ENST00000551165 MRE11P49959 708 aa22.75■■□□□ 1.23
SSH1-209ENST00000551165 STK38Q15208 465 aa22.75■■□□□ 1.23
SSH1-209ENST00000551165 SF3A1Q15459 793 aaKnown RBP22.75■■□□□ 1.23
SSH1-209ENST00000551165 CAMK4Q16566 473 aa22.75■■□□□ 1.23
SSH1-209ENST00000551165 LRRC47Q8N1G4 583 aaKnown RBP22.75■■□□□ 1.23
SSH1-209ENST00000551165 PHF20Q9BVI0 1012 aa22.75■■□□□ 1.23
SSH1-209ENST00000551165 SHTN1A0MZ66 631 aa22.75■■□□□ 1.23
SSH1-209ENST00000551165 PALM3A6NDB9 673 aaPredicted RBP22.75■■□□□ 1.23
SSH1-209ENST00000551165 TOB1P50616 345 aaPredicted RBP22.75■■□□□ 1.23
SSH1-209ENST00000551165 NPY5RQ15761 445 aa22.75■■□□□ 1.23
SSH1-209ENST00000551165 EARS2Q5JPH6 523 aaKnown RBP22.75■■□□□ 1.23
SSH1-209ENST00000551165 MAP3K14Q99558 947 aa22.75■■□□□ 1.23
SSH1-209ENST00000551165 SWAP70Q9UH65 585 aa22.75■■□□□ 1.23
SSH1-209ENST00000551165 PLIN4Q96Q06 1357 aa22.74■■□□□ 1.23
SSH1-209ENST00000551165 SPDYE2BA6NHP3 402 aa22.74■■□□□ 1.23
SSH1-209ENST00000551165 SPDYE6P0CI01 402 aa22.74■■□□□ 1.23
SSH1-209ENST00000551165 TOP1P11387 765 aaKnown RBP22.74■■□□□ 1.23
SSH1-209ENST00000551165 NOM1Q5C9Z4 860 aaKnown RBP22.74■■□□□ 1.23
SSH1-209ENST00000551165 PRELPP51888 382 aa22.74■■□□□ 1.23
SSH1-209ENST00000551165 SAFBQ15424 915 aaKnown RBP eCLIP22.74■■□□□ 1.23
SSH1-209ENST00000551165 CCAR1Q8IX12 1150 aaKnown RBP22.74■■□□□ 1.23
SSH1-209ENST00000551165 EHD4Q9H223 541 aa22.74■■□□□ 1.23
SSH1-209ENST00000551165 CD2APQ9Y5K6 639 aa22.74■■□□□ 1.23
SSH1-209ENST00000551165 USP17L5A8MUK1 530 aa22.73■■□□□ 1.23
SSH1-209ENST00000551165 TCP10L2B9ZVM9 353 aa22.73■■□□□ 1.23
SSH1-209ENST00000551165 MPHOSPH10O00566 681 aaKnown RBP22.73■■□□□ 1.23
SSH1-209ENST00000551165 SCG2P13521 617 aa22.73■■□□□ 1.23
SSH1-209ENST00000551165 MARCKSP29966 332 aaPredicted RBP22.73■■□□□ 1.23
SSH1-209ENST00000551165 GPKOWQ92917 476 aaPredicted RBP eCLIP22.73■■□□□ 1.23
SSH1-209ENST00000551165 VPS33BQ9H267 617 aa22.73■■□□□ 1.23
SSH1-209ENST00000551165 DHX36Q9H2U1 1008 aaKnown RBP22.73■■□□□ 1.23
SSH1-209ENST00000551165 FOXP1Q9H334 677 aaPredicted RBP22.73■■□□□ 1.23
SSH1-209ENST00000551165 PI4KBQ9UBF8 816 aa22.73■■□□□ 1.23
SSH1-209ENST00000551165 CLIP2Q9UDT6 1046 aa22.73■■□□□ 1.23
SSH1-209ENST00000551165 MYO3BQ8WXR4 1341 aa22.73■■□□□ 1.23
SSH1-209ENST00000551165 SPTLC2O15270 562 aa22.72■■□□□ 1.23
SSH1-209ENST00000551165 YEATS4O95619 227 aa22.72■■□□□ 1.23
SSH1-209ENST00000551165 RASSF7Q02833 373 aa22.72■■□□□ 1.23
SSH1-209ENST00000551165 PFKFB3Q16875 520 aaPredicted RBP22.72■■□□□ 1.23
SSH1-209ENST00000551165 ISY1Q9ULR0 285 aaKnown RBP22.72■■□□□ 1.23
SSH1-209ENST00000551165 PTPAQ15257 358 aa22.72■■□□□ 1.23
SSH1-209ENST00000551165 KLRF2D3W0D1 207 aa22.71■■□□□ 1.23
SSH1-209ENST00000551165 DLGAP5Q15398 846 aa22.71■■□□□ 1.23
SSH1-209ENST00000551165 NPM3O75607 178 aaKnown RBP22.71■■□□□ 1.23
SSH1-209ENST00000551165 SLC39A14Q15043 492 aa22.71■■□□□ 1.23
SSH1-209ENST00000551165 TYW1BQ6NUM6 668 aa22.71■■□□□ 1.23
SSH1-209ENST00000551165 OGFOD1Q8N543 542 aa22.71■■□□□ 1.23
SSH1-209ENST00000551165 FRMPD2Q68DX3 1309 aaPredicted RBP22.7■■□□□ 1.23
SSH1-209ENST00000551165 CABP5Q9NP86 173 aa22.7■■□□□ 1.22
SSH1-209ENST00000551165 ZNF70Q9UC06 446 aaPredicted RBP22.7■■□□□ 1.22
SSH1-209ENST00000551165 ATP2B1P20020 1258 aa22.7■■□□□ 1.22
SSH1-209ENST00000551165 JAG1P78504 1218 aa22.7■■□□□ 1.22
SSH1-209ENST00000551165 SNW1Q13573 536 aaKnown RBP22.7■■□□□ 1.22
SSH1-209ENST00000551165 CDAN1Q8IWY9 1227 aa22.7■■□□□ 1.22
SSH1-209ENST00000551165 KCNG4Q8TDN1 519 aa22.7■■□□□ 1.22
SSH1-209ENST00000551165 UBA5Q9GZZ9 404 aa22.7■■□□□ 1.22
SSH1-209ENST00000551165 NUP62CLQ9H1M0 184 aa22.7■■□□□ 1.22
SSH1-209ENST00000551165 SCAF8Q9UPN6 1271 aaKnown RBP22.7■■□□□ 1.22
SSH1-209ENST00000551165 PARP1P09874 1014 aaKnown RBP22.69■■□□□ 1.22
SSH1-209ENST00000551165 PDHBP11177 359 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 XBP1P17861 261 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 ATP2B2Q01814 1243 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 RRP1BQ14684 758 aaKnown RBP22.69■■□□□ 1.22
SSH1-209ENST00000551165 AXDND1Q5T1B0 1012 aaPredicted RBP22.69■■□□□ 1.22
SSH1-209ENST00000551165 FSIP1Q8NA03 581 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 RNF214Q8ND24 703 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 HDAC9Q9UKV0 1011 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 A0A1B0GVL5 298 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 WNT7AO00755 349 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 ENTPD3O75355 529 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 KRT2P35908 639 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 ADALQ6DHV7 355 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 CIAPIN1Q6FI81 312 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 CKAP2LQ8IYA6 745 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 JDP2Q8WYK2 163 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 PCDHB6Q9Y5E3 794 aa22.69■■□□□ 1.22
SSH1-209ENST00000551165 GREB1LQ9C091 1923 aaPredicted RBP22.69■■□□□ 1.22
SSH1-209ENST00000551165 GDF11O95390 407 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 TTLL1O95922 423 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 GNAQP50148 359 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 CERKLQ49MI3 558 aaPredicted RBP22.68■■□□□ 1.22
SSH1-209ENST00000551165 ENGASEQ8NFI3 743 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 TNFRSF25Q93038 417 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 TSPY26PQ9H489 355 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 VAT1LQ9HCJ6 419 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 EGFRP00533 1210 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 TATDN1Q6P1N9 297 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 AGBL3Q8NEM8 1001 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 CSRNP1Q96S65 589 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 FUCA2Q9BTY2 467 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 CLSTN2Q9H4D0 955 aa22.68■■□□□ 1.22
SSH1-209ENST00000551165 ATRNL1Q5VV63 1379 aa22.67■■□□□ 1.22
SSH1-209ENST00000551165 NLRP5P59047 1200 aa22.67■■□□□ 1.22
SSH1-209ENST00000551165 NBPF9Q3BBW0 867 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms