RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 SNX17Q15036 470 aa13.46□□□□□ -0.25
PFDN5-212ENST00000550880 C1orf53Q5VUE5 145 aa13.46□□□□□ -0.25
PFDN5-212ENST00000550880 NCAPG2Q86XI2 1143 aa13.46□□□□□ -0.25
PFDN5-212ENST00000550880 ABRAQ8N0Z2 381 aa13.46□□□□□ -0.25
PFDN5-212ENST00000550880 FERMT2Q96AC1 680 aa13.46□□□□□ -0.25
PFDN5-212ENST00000550880 PDLIM7Q9NR12 457 aa13.46□□□□□ -0.25
PFDN5-212ENST00000550880 IGHA2P01877 340 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 RARBP10826 455 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 FCER1AP12319 257 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 SHMT1P34896 483 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 PLCD1P51178 756 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 ATP8B2P98198 1209 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 SEPT2Q15019 361 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 LRRC41Q15345 812 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 RNF180Q86T96 592 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 SSH3Q8TE77 659 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 CLUAP1Q96AJ1 413 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 RNPC3Q96LT9 517 aaKnown RBP13.45□□□□□ -0.26
PFDN5-212ENST00000550880 CCDC8Q9H0W5 538 aaPredicted RBP13.45□□□□□ -0.26
PFDN5-212ENST00000550880 DBNLQ9UJU6 430 aaKnown RBP13.45□□□□□ -0.26
PFDN5-212ENST00000550880 FRMPD3Q5JV73 1810 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 FOCADQ5VW36 1801 aa13.45□□□□□ -0.26
PFDN5-212ENST00000550880 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 TRIM43BA6NCK2 446 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 COBLO75128 1261 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 BCAR3O75815 825 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 FLOT1O75955 427 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 CLTBP09497 229 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 TLE2Q04725 743 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 PRAMEF19Q5SWL8 479 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 TRIM43Q96BQ3 446 aaPredicted RBP13.44□□□□□ -0.26
PFDN5-212ENST00000550880 CRNKL1Q9BZJ0 848 aaKnown RBP13.44□□□□□ -0.26
PFDN5-212ENST00000550880 TTYH1Q9H313 450 aaPredicted RBP13.44□□□□□ -0.26
PFDN5-212ENST00000550880 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 XPNPEP3Q9NQH7 507 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 NRBP1Q9UHY1 535 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 DNAH12Q6ZR08 3092 aa13.44□□□□□ -0.26
PFDN5-212ENST00000550880 SLC25A27O95847 323 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 RAG1P15918 1043 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 DSG3P32926 999 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 GUCY1A2P33402 732 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 TTF1Q15361 905 aaPredicted RBP13.43□□□□□ -0.26
PFDN5-212ENST00000550880 TMEM179Q6ZVK1 233 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 SH3RF1Q7Z6J0 888 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 MAML3Q96JK9 1138 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 CDK5RAP2Q96SN8 1893 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 ARHGEF10LQ9HCE6 1279 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 MCM9Q9NXL9 1143 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 PHF24Q9UPV7 400 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
PFDN5-212ENST00000550880 MYH1P12882 1939 aa13.43□□□□□ -0.26
PFDN5-212ENST00000550880 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.42□□□□□ -0.26
PFDN5-212ENST00000550880 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.42□□□□□ -0.26
PFDN5-212ENST00000550880 FPGSQ05932 587 aa13.42□□□□□ -0.26
PFDN5-212ENST00000550880 FAM47AQ5JRC9 791 aa13.42□□□□□ -0.26
PFDN5-212ENST00000550880 ZKSCAN2Q63HK3 967 aa13.42□□□□□ -0.26
PFDN5-212ENST00000550880 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
PFDN5-212ENST00000550880 TMEM57Q8N5G2 664 aa13.42□□□□□ -0.26
PFDN5-212ENST00000550880 EAF2Q96CJ1 260 aaPredicted RBP13.42□□□□□ -0.26
PFDN5-212ENST00000550880 TMEM39AQ9NV64 488 aa13.42□□□□□ -0.26
PFDN5-212ENST00000550880 TLR7Q9NYK1 1049 aaKnown RBP13.42□□□□□ -0.26
PFDN5-212ENST00000550880 SWAP70Q9UH65 585 aa13.42□□□□□ -0.26
PFDN5-212ENST00000550880 LAMA2P24043 3122 aaKnown RBP13.42□□□□□ -0.26
PFDN5-212ENST00000550880 LTBP2Q14767 1821 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 A0A1W2PRG0 241 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 KIAA0355O15063 1070 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 PQBP1O60828 265 aaKnown RBP13.41□□□□□ -0.26
PFDN5-212ENST00000550880 GABPAQ06546 454 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 KCTD2Q14681 263 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 TJAP1Q5JTD0 557 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 CCDC174Q6PII3 467 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 ERC1Q8IUD2 1116 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 MMP19Q99542 508 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 RIOK1Q9BRS2 568 aaKnown RBP13.41□□□□□ -0.26
PFDN5-212ENST00000550880 ANTXR1Q9H6X2 564 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 RLFQ13129 1914 aa13.41□□□□□ -0.26
PFDN5-212ENST00000550880 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 WDR46O15213 610 aaKnown RBP13.4□□□□□ -0.26
PFDN5-212ENST00000550880 COPB2P35606 906 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 SLC9C2Q5TAH2 1124 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 AMOTL1Q8IY63 956 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 FTSJ3Q8IY81 847 aaKnown RBP13.4□□□□□ -0.26
PFDN5-212ENST00000550880 SPICE1Q8N0Z3 855 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 NUP133Q8WUM0 1156 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 ATG4CQ96DT6 458 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 TINF2Q9BSI4 451 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 TNNQ9UQP3 1299 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 CNPY2Q9Y2B0 182 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 DIS3Q9Y2L1 958 aaKnown RBP13.4□□□□□ -0.26
PFDN5-212ENST00000550880 ZNF236Q9UL36 1845 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 VCANP13611 3396 aa13.4□□□□□ -0.26
PFDN5-212ENST00000550880 A0A1W2PQ45 241 aaPredicted RBP13.39□□□□□ -0.27
PFDN5-212ENST00000550880 A0A1W2PQY0 241 aa13.39□□□□□ -0.27
PFDN5-212ENST00000550880 PGK1P00558 417 aa13.39□□□□□ -0.27
PFDN5-212ENST00000550880 AKR1A1P14550 325 aa13.39□□□□□ -0.27
PFDN5-212ENST00000550880 DNAJB2P25686 324 aa13.39□□□□□ -0.27
PFDN5-212ENST00000550880 ICA1Q05084 483 aa13.39□□□□□ -0.27
PFDN5-212ENST00000550880 AACSQ86V21 672 aa13.39□□□□□ -0.27
PFDN5-212ENST00000550880 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
PFDN5-212ENST00000550880 TOX2Q96NM4 488 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms