RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 MCTP2Q6DN12 878 aa17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 RAB17Q9H0T7 212 aa17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 MCM9Q9NXL9 1143 aa17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 CEP128Q6ZU80 1094 aa17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 SYCE1Q8N0S2 351 aa17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 XAGE2Q96GT9 111 aa17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 MMS22LQ6ZRQ5 1243 aa17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 JPH2Q9BR39 696 aaPredicted RBP17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 NLRC4Q9NPP4 1024 aa17.53■□□□□ 0.4
RBFOX1-212ENST00000550418 EPB41P11171 864 aaKnown RBP17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 RASSF2P50749 326 aa17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 ARHGAP24Q8N264 748 aa17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 HOMER3Q9NSC5 361 aa17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 H7C1D1 291 aa17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 ENC1O14682 589 aa17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 SLC39A14Q15043 492 aa17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 ZNF365Q70YC5 407 aa17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 VCX3BQ9H321 246 aa17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 PDIA3P30101 505 aaKnown RBP17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 ADD1P35611 737 aaKnown RBP17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 GYS2P54840 703 aa17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 BICD1Q96G01 975 aa17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 SPATS2LQ9NUQ6 558 aaKnown RBP17.52■□□□□ 0.4
RBFOX1-212ENST00000550418 SBNO1A3KN83 1393 aa17.52■□□□□ 0.39
RBFOX1-212ENST00000550418 VPS52Q8N1B4 723 aa17.52■□□□□ 0.39
RBFOX1-212ENST00000550418 ASIC3Q9UHC3 531 aa17.52■□□□□ 0.39
RBFOX1-212ENST00000550418 HLA-DOAP06340 250 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 ERCC3P19447 782 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 ERCC5P28715 1186 aaPredicted RBP17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 DNAI2Q9GZS0 605 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 ABCB6Q9NP58 842 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 POLR3EQ9NVU0 708 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 GCKRQ14397 625 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 VSTM4Q8IW00 320 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 SYNCQ9H7C4 482 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 KLHL14Q9P2G3 628 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 TAF5LO75529 589 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 ZMYND10O75800 440 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 ARID4AP29374 1257 aaPredicted RBP17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 CSRNP2Q9H175 543 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 LRRIQ1Q96JM4 1722 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 LARGE1O95461 756 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 E2F5Q15329 346 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 TRIM68Q6AZZ1 485 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 CCDC62Q6P9F0 684 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 ARMT1Q9H993 441 aa17.51■□□□□ 0.39
RBFOX1-212ENST00000550418 FRMD3A2A2Y4 597 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 PTPN21Q16825 1174 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 CC2D1AQ6P1N0 951 aaPredicted RBP17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 RPSAP08865 295 aaKnown RBP17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 EPHB4P54760 987 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 GUCY2DQ02846 1103 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 CLUL1Q15846 466 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 HHATQ5VTY9 493 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 TADA2BQ86TJ2 420 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 FTOQ9C0B1 505 aaKnown RBP eCLIP17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 KCNK3O14649 394 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 STX2P32856 288 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 RBBP5Q15291 538 aaKnown RBP17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 APBB1IPQ7Z5R6 666 aaPredicted RBP17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 NSUN7Q8NE18 718 aaKnown RBP17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 MGARPQ8TDB4 240 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 VPS54Q9P1Q0 977 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 ADCY9O60503 1353 aa17.5■□□□□ 0.39
RBFOX1-212ENST00000550418 ANKRD65E5RJM6 399 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 GBP5Q96PP8 586 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 ZDHHC9Q9Y397 364 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 KIF3CO14782 793 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 CCDC105Q8IYK2 499 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 EIF3CLB5ME19 914 aaKnown RBP17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 IRS4O14654 1257 aaPredicted RBP17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 HSPD1P10809 573 aaKnown RBP17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 COPB1P53618 953 aaKnown RBP17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 MUM1Q2TAK8 710 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 ANKRD42Q8N9B4 389 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 LINC00301Q8NCQ3 95 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 RAB3IPQ96QF0 476 aaPredicted RBP17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 EIF3CQ99613 913 aaKnown RBP17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 NOL3O60936 208 aaKnown RBP17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 LUC7L3O95232 432 aaKnown RBP17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 TXKP42681 527 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 IRX5P78411 483 aaPredicted RBP17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 INF2Q27J81 1249 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 PLBD2Q8NHP8 589 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 SLAIN2Q9P270 581 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 CTTNBP2NLQ9P2B4 639 aa17.49■□□□□ 0.39
RBFOX1-212ENST00000550418 PRR36Q9H6K5 1346 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 BTBD18B2RXH4 712 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 RBL2Q08999 1139 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 UAP1Q16222 522 aaPredicted RBP17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 PARP2Q9UGN5 583 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 ANAPC4Q9UJX5 808 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 MYOM2P54296 1465 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 KRIT1O00522 736 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 ZSCAN20P17040 1043 aaPredicted RBP17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 RFC4P35249 363 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms