RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 PAX4O43316 350 aa8.12□□□□□ -1.11
USP15-213ENST00000549268 IMPDH2P12268 514 aa8.12□□□□□ -1.11
USP15-213ENST00000549268 TNK2Q07912 1038 aa8.12□□□□□ -1.11
USP15-213ENST00000549268 SF3A1Q15459 793 aaKnown RBP8.12□□□□□ -1.11
USP15-213ENST00000549268 RNF141Q8WVD5 230 aa8.12□□□□□ -1.11
USP15-213ENST00000549268 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
USP15-213ENST00000549268 SRRTQ9BXP5 876 aaKnown RBP8.12□□□□□ -1.11
USP15-213ENST00000549268 GMIPQ9P107 970 aa8.12□□□□□ -1.11
USP15-213ENST00000549268 SLC22A31A6NKX4 558 aa8.11□□□□□ -1.11
USP15-213ENST00000549268 DNAJA2O60884 412 aa8.11□□□□□ -1.11
USP15-213ENST00000549268 RNASE1P07998 156 aaKnown RBP8.11□□□□□ -1.11
USP15-213ENST00000549268 SOX9P48436 509 aa8.11□□□□□ -1.11
USP15-213ENST00000549268 EIF6P56537 245 aaKnown RBP8.11□□□□□ -1.11
USP15-213ENST00000549268 LRRFIP1Q32MZ4 808 aaKnown RBP8.11□□□□□ -1.11
USP15-213ENST00000549268 CDKAL1Q5VV42 579 aa8.11□□□□□ -1.11
USP15-213ENST00000549268 ATG4DQ86TL0 474 aaPredicted RBP8.11□□□□□ -1.11
USP15-213ENST00000549268 ANAPC16Q96DE5 110 aa8.11□□□□□ -1.11
USP15-213ENST00000549268 Q96M66 194 aa8.11□□□□□ -1.11
USP15-213ENST00000549268 ADAMTS6Q9UKP5 1117 aa8.11□□□□□ -1.11
USP15-213ENST00000549268 KRTAP9-6A0A140TA67 174 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 BIN1O00499 593 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 RGS13O14921 159 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 ZP2Q05996 745 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 CDCP2Q5VXM1 449 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 SREK1Q8WXA9 508 aaKnown RBP8.1□□□□□ -1.11
USP15-213ENST00000549268 ASPNQ9BXN1 380 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 ATP13A1Q9HD20 1204 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 USP35Q9P2H5 1018 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 KCNH3Q9ULD8 1083 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 STRIP2Q9ULQ0 834 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 MRVI1Q9Y6F6 885 aa8.1□□□□□ -1.11
USP15-213ENST00000549268 H3BS24 57 aa8.09□□□□□ -1.11
USP15-213ENST00000549268 SRFP11831 508 aa8.09□□□□□ -1.11
USP15-213ENST00000549268 GTF2F1P35269 517 aaKnown RBP eCLIP8.09□□□□□ -1.11
USP15-213ENST00000549268 CHMP4BP1P59074 171 aa8.09□□□□□ -1.11
USP15-213ENST00000549268 TMPRSS7Q7RTY8 843 aa8.09□□□□□ -1.11
USP15-213ENST00000549268 PHACTR4Q8IZ21 702 aa8.09□□□□□ -1.11
USP15-213ENST00000549268 GPR62Q9BZJ7 368 aa8.09□□□□□ -1.11
USP15-213ENST00000549268 RC3H2Q9HBD1 1191 aaKnown RBP8.09□□□□□ -1.11
USP15-213ENST00000549268 MCF2L2Q86YR7 1114 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 DTWD2Q8NBA8 298 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 BAHD1Q8TBE0 780 aaPredicted RBP8.08□□□□□ -1.12
USP15-213ENST00000549268 UBE2FQ969M7 185 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 VWCEQ96DN2 955 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 ASIC4Q96FT7 647 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 DRC1Q96MC2 740 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 KREMEN1Q96MU8 473 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 GMLQ99445 158 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 DUSP15Q9H1R2 295 aaPredicted RBP8.08□□□□□ -1.12
USP15-213ENST00000549268 TRIT1Q9H3H1 467 aaKnown RBP8.08□□□□□ -1.12
USP15-213ENST00000549268 ANTXR1Q9H6X2 564 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 CNNM2Q9H8M5 875 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 ZNRF3Q9ULT6 936 aa8.08□□□□□ -1.12
USP15-213ENST00000549268 MEIS3P2A8K0S8 358 aa8.07□□□□□ -1.12
USP15-213ENST00000549268 PAPLNO95428 1278 aa8.07□□□□□ -1.12
USP15-213ENST00000549268 RAG1P15918 1043 aa8.07□□□□□ -1.12
USP15-213ENST00000549268 CCNFP41002 786 aa8.07□□□□□ -1.12
USP15-213ENST00000549268 PPP2R5EQ16537 467 aa8.07□□□□□ -1.12
USP15-213ENST00000549268 ARSHQ5FYA8 562 aa8.07□□□□□ -1.12
USP15-213ENST00000549268 LRRN4CLQ8ND94 238 aa8.07□□□□□ -1.12
USP15-213ENST00000549268 FLAD1Q8NFF5 587 aa8.07□□□□□ -1.12
USP15-213ENST00000549268 KIF2CQ99661 725 aa8.07□□□□□ -1.12
USP15-213ENST00000549268 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.07□□□□□ -1.122e-6■□□□□ 11.1
USP15-213ENST00000549268 R3HCC1Q9Y3T6 440 aaKnown RBP8.07□□□□□ -1.12
USP15-213ENST00000549268 STK10O94804 968 aaKnown RBP8.06□□□□□ -1.12
USP15-213ENST00000549268 GBP1P32455 592 aa8.06□□□□□ -1.12
USP15-213ENST00000549268 GAB4Q2WGN9 574 aa8.06□□□□□ -1.12
USP15-213ENST00000549268 TMEM40Q8WWA1 233 aa8.06□□□□□ -1.12
USP15-213ENST00000549268 CCDC120Q96HB5 630 aa8.06□□□□□ -1.12
USP15-213ENST00000549268 CARS2Q9HA77 564 aaKnown RBP8.06□□□□□ -1.12
USP15-213ENST00000549268 GPATCH2Q9NW75 528 aa8.06□□□□□ -1.12
USP15-213ENST00000549268 ZSWIM5Q9P217 1185 aa8.06□□□□□ -1.12
USP15-213ENST00000549268 UBOX5O94941 541 aa8.05□□□□□ -1.12
USP15-213ENST00000549268 FGRP09769 529 aa8.05□□□□□ -1.12
USP15-213ENST00000549268 OVOS1Q6IE37 1185 aa8.05□□□□□ -1.12
USP15-213ENST00000549268 NLRC3Q7RTR2 1065 aa8.05□□□□□ -1.12
USP15-213ENST00000549268 DHX38Q92620 1227 aaKnown RBP8.05□□□□□ -1.12
USP15-213ENST00000549268 ATG4CQ96DT6 458 aa8.05□□□□□ -1.12
USP15-213ENST00000549268 FAM86C2PA6NEL3 165 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 ESR1P03372 595 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 ETFBP38117 255 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 TXKP42681 527 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 GIPRP48546 466 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 RNF4P78317 190 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 RUFY4Q6ZNE9 571 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 TSPYL5Q86VY4 417 aaPredicted RBP8.04□□□□□ -1.12
USP15-213ENST00000549268 OR6P1Q8NGX9 317 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 SHDQ96IW2 340 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 PRDM7Q9NQW5 492 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 RNF114Q9Y508 228 aa8.04□□□□□ -1.12
USP15-213ENST00000549268 TNFRSF10CO14798 259 aa8.03□□□□□ -1.12
USP15-213ENST00000549268 INTS3Q68E01 1043 aaKnown RBP8.03□□□□□ -1.12
USP15-213ENST00000549268 LSRQ86X29 649 aaPredicted RBP8.03□□□□□ -1.12
USP15-213ENST00000549268 RBBP8NLQ8NC74 664 aaPredicted RBP8.03□□□□□ -1.12
USP15-213ENST00000549268 ENOX1Q8TC92 643 aaKnown RBP8.03□□□□□ -1.12
USP15-213ENST00000549268 TM9SF2Q99805 663 aa8.03□□□□□ -1.12
USP15-213ENST00000549268 CTNND2Q9UQB3 1225 aa8.03□□□□□ -1.12
USP15-213ENST00000549268 LRRN2O75325 713 aa8.02□□□□□ -1.13
USP15-213ENST00000549268 NME1P15531 152 aaKnown RBP8.02□□□□□ -1.13
USP15-213ENST00000549268 TPP2P29144 1249 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms