RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ACTN4O43707 911 aaKnown RBP15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 MARCH6O60337 910 aa15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 SSBP05455 408 aaKnown RBP eCLIP15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 TPM1P09493 284 aa15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 SCG2P13521 617 aa15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 TROAPQ12815 778 aa15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 UBE4AQ14139 1066 aa15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 SEC23AQ15436 765 aa15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 AMOTL1Q8IY63 956 aa15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 BSDC1Q9NW68 430 aaPredicted RBP15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 ZNF142P52746 1687 aaPredicted RBP15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 ZNF804BA4D1E1 1349 aa15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 ZSCAN20P17040 1043 aaPredicted RBP15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 JAKMIP3Q5VZ66 844 aa15.49■□□□□ 0.07
PRPF40B-209ENST00000548825 AKR1B15C9JRZ8 316 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 SLURP2P0DP57 97 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 TXLNAP40222 546 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 ENOX2Q16206 610 aaKnown RBP15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 USP17L2Q6R6M4 530 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 HPS3Q969F9 1004 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 MED15Q96RN5 788 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 SLF1Q9BQI6 1058 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 RTCBQ9Y3I0 505 aaKnown RBP15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 RHOXF2BP0C7M4 288 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 DNA2P51530 1060 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 TMCO3Q6UWJ1 677 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 RHOXF2Q9BQY4 288 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 SPATA31A1Q5TZJ5 1347 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 PNPLA7Q6ZV29 1317 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 ARHGAP6O43182 974 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 UBXN1Q04323 297 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 TMTC3Q6ZXV5 915 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 IQUBQ8NA54 791 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 BPIFA3Q9BQP9 254 aa15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 FRMPD2Q68DX3 1309 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-209ENST00000548825 KIF2AO00139 706 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 PLCD1P51178 756 aa15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 CLCN6P51797 869 aa15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 DPYDQ12882 1025 aa15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 MRPL44Q9H9J2 332 aaKnown RBP15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 OGFRQ9NZT2 677 aa15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 NAPAP54920 295 aa15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 SMAP1Q8IYB5 467 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 TC2NQ8N9U0 490 aa15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 TRIM47Q96LD4 638 aa15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 GUCA1BQ9UMX6 200 aa15.47■□□□□ 0.07
PRPF40B-209ENST00000548825 SLFN14P0C7P3 912 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 IDEP14735 1019 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 GYS2P54840 703 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 MORC3Q14149 939 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 KRT222Q8N1A0 295 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 ANKRD20A12PQ8NF67 263 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 NELFBQ8WX92 580 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 DRC1Q96MC2 740 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 ZCCHC17Q9NP64 241 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 ABL1P00519 1130 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 MDM2Q00987 491 aaPredicted RBP15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 KANK3Q6NY19 840 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 GDAP1L1Q96MZ0 367 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 PHF20Q9BVI0 1012 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 NWD2Q9ULI1 1742 aa15.46■□□□□ 0.07
PRPF40B-209ENST00000548825 MPHOSPH10O00566 681 aaKnown RBP15.46■□□□□ 0.06
PRPF40B-209ENST00000548825 UFL1O94874 794 aa15.46■□□□□ 0.06
PRPF40B-209ENST00000548825 PPP2R3AQ06190 1150 aa15.46■□□□□ 0.06
PRPF40B-209ENST00000548825 MCM6Q14566 821 aa15.46■□□□□ 0.06
PRPF40B-209ENST00000548825 ZHX3Q9H4I2 956 aa15.46■□□□□ 0.06
PRPF40B-209ENST00000548825 BIN2Q9UBW5 565 aaPredicted RBP15.46■□□□□ 0.06
PRPF40B-209ENST00000548825 FAM205AQ6ZU69 1335 aa15.46■□□□□ 0.06
PRPF40B-209ENST00000548825 STK36Q9NRP7 1315 aa15.46■□□□□ 0.06
PRPF40B-209ENST00000548825 PSDA5PKW4 1024 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 G3V3G9 751 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 ENC1O14682 589 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 FANCGO15287 622 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 PRPF3O43395 683 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 CCNT1O60563 726 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 KIF5BP33176 963 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 RAD51AP2Q09MP3 1159 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 FKBP15Q5T1M5 1219 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 DCAF8Q5TAQ9 597 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 SMARCC1Q92922 1105 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 GJA10Q969M2 543 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 CCDC175P0C221 793 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 FXR1P51114 621 aaKnown RBP eCLIP15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 TJP1Q07157 1748 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 REXO1L1PQ8IX06 675 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 ENOX1Q8TC92 643 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 RPGRQ92834 1020 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 CAPZA3Q96KX2 299 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 ARGLU1Q9NWB6 273 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 KRT9P35527 623 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 TYW1BQ6NUM6 668 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 DTHD1Q6ZMT9 781 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 DYMQ7RTS9 669 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 BLIDQ8IZY5 108 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 ARHGEF1Q92888 912 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 TMEM60Q9H2L4 133 aa15.45■□□□□ 0.06
PRPF40B-209ENST00000548825 CCP110O43303 1012 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 PHACTR2O75167 634 aa15.44■□□□□ 0.06
PRPF40B-209ENST00000548825 TECP42680 631 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms