RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 RILPL2Q969X0 211 aa14.29□□□□□ -0.12
UBC-214ENST00000546271 SHISA4Q96DD7 197 aa14.29□□□□□ -0.12
UBC-214ENST00000546271 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBC-214ENST00000546271 NAPBQ9H115 298 aa14.29□□□□□ -0.12
UBC-214ENST00000546271 KANSL2Q9H9L4 492 aa14.29□□□□□ -0.12
UBC-214ENST00000546271 MKNK2Q9HBH9 465 aa14.29□□□□□ -0.12
UBC-214ENST00000546271 CWC22Q9HCG8 908 aaKnown RBP14.29□□□□□ -0.12
UBC-214ENST00000546271 HELLSQ9NRZ9 838 aa14.29□□□□□ -0.12
UBC-214ENST00000546271 PARP14Q460N5 1801 aa14.29□□□□□ -0.12
UBC-214ENST00000546271 FRMPD3Q5JV73 1810 aa14.29□□□□□ -0.12
UBC-214ENST00000546271 EEF2P13639 858 aaKnown RBP14.28□□□□□ -0.12
UBC-214ENST00000546271 ERVK-9P63128 1117 aa14.28□□□□□ -0.12
UBC-214ENST00000546271 ERVK-24P63145 666 aa14.28□□□□□ -0.12
UBC-214ENST00000546271 IRF5Q13568 498 aa14.28□□□□□ -0.12
UBC-214ENST00000546271 Q3C1V9 767 aa14.28□□□□□ -0.12
UBC-214ENST00000546271 PDE4DIPQ5VU43 2346 aa14.28□□□□□ -0.12
UBC-214ENST00000546271 CCAR1Q8IX12 1150 aaKnown RBP14.28□□□□□ -0.12
UBC-214ENST00000546271 LPAR1Q92633 364 aa14.28□□□□□ -0.12
UBC-214ENST00000546271 FAM227BQ96M60 508 aa14.28□□□□□ -0.12
UBC-214ENST00000546271 UNC93B1Q9H1C4 597 aa14.28□□□□□ -0.12
UBC-214ENST00000546271 SH2D4AQ9H788 454 aa14.28□□□□□ -0.12
UBC-214ENST00000546271 BRCA2P51587 3418 aa14.27□□□□□ -0.12
UBC-214ENST00000546271 A0A0D9SFI3 127 aa14.27□□□□□ -0.13
UBC-214ENST00000546271 ATP2B2Q01814 1243 aa14.27□□□□□ -0.13
UBC-214ENST00000546271 MCMDC2Q4G0Z9 681 aa14.27□□□□□ -0.13
UBC-214ENST00000546271 VPS53Q5VIR6 699 aa14.27□□□□□ -0.13
UBC-214ENST00000546271 LBX2Q6XYB7 198 aa14.27□□□□□ -0.13
UBC-214ENST00000546271 NKX2-3Q8TAU0 364 aa14.27□□□□□ -0.13
UBC-214ENST00000546271 VCPKMTQ9H867 229 aa14.27□□□□□ -0.13
UBC-214ENST00000546271 ZNF287Q9HBT7 754 aa14.27□□□□□ -0.13
UBC-214ENST00000546271 GJD2Q9UKL4 321 aa14.27□□□□□ -0.13
UBC-214ENST00000546271 RABGAP1Q9Y3P9 1069 aa14.27□□□□□ -0.13
UBC-214ENST00000546271 SPDYE16A6NNV3 312 aaPredicted RBP14.26□□□□□ -0.13
UBC-214ENST00000546271 PRDM1O75626 825 aa14.26□□□□□ -0.13
UBC-214ENST00000546271 CNMDO75829 334 aa14.26□□□□□ -0.13
UBC-214ENST00000546271 GJB1P08034 283 aa14.26□□□□□ -0.13
UBC-214ENST00000546271 SDSP20132 328 aa14.26□□□□□ -0.13
UBC-214ENST00000546271 PPARAQ07869 468 aa14.26□□□□□ -0.13
UBC-214ENST00000546271 NMIQ13287 307 aaPredicted RBP14.26□□□□□ -0.13
UBC-214ENST00000546271 COG2Q14746 738 aa14.26□□□□□ -0.13
UBC-214ENST00000546271 ZNF444Q8N0Y2 327 aaPredicted RBP14.26□□□□□ -0.13
UBC-214ENST00000546271 SPICE1Q8N0Z3 855 aa14.26□□□□□ -0.13
UBC-214ENST00000546271 PXYLP1Q8TE99 480 aa14.26□□□□□ -0.13
UBC-214ENST00000546271 PORCNQ9H237 461 aa14.26□□□□□ -0.13
UBC-214ENST00000546271 COL11A1P12107 1806 aaPredicted RBP14.26□□□□□ -0.13
UBC-214ENST00000546271 GREB1LQ9C091 1923 aaPredicted RBP14.25□□□□□ -0.13
UBC-214ENST00000546271 KIAA0100Q14667 2235 aaKnown RBP14.25□□□□□ -0.13
UBC-214ENST00000546271 IGKV6D-41A0A0C4DH26 115 aa14.25□□□□□ -0.13
UBC-214ENST00000546271 SLC3A2P08195 630 aaKnown RBP14.25□□□□□ -0.13
UBC-214ENST00000546271 PDE4AP27815 886 aa14.25□□□□□ -0.13
UBC-214ENST00000546271 MAPK4P31152 587 aa14.25□□□□□ -0.13
UBC-214ENST00000546271 GJA8P48165 433 aa14.25□□□□□ -0.13
UBC-214ENST00000546271 PDE4BQ07343 736 aa14.25□□□□□ -0.13
UBC-214ENST00000546271 WDR78Q5VTH9 848 aa14.25□□□□□ -0.13
UBC-214ENST00000546271 U2AF1L4Q8WU68 220 aaKnown RBP14.25□□□□□ -0.13
UBC-214ENST00000546271 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
UBC-214ENST00000546271 HOXC10Q9NYD6 342 aa14.25□□□□□ -0.13
UBC-214ENST00000546271 BTBD7Q9P203 1132 aa14.25□□□□□ -0.13
UBC-214ENST00000546271 RLFQ13129 1914 aa14.24□□□□□ -0.13
UBC-214ENST00000546271 ALPK3Q96L96 1907 aa14.24□□□□□ -0.13
UBC-214ENST00000546271 MYH4Q9Y623 1939 aa14.24□□□□□ -0.13
UBC-214ENST00000546271 WDR46O15213 610 aaKnown RBP14.24□□□□□ -0.13
UBC-214ENST00000546271 FARP2O94887 1054 aaPredicted RBP14.24□□□□□ -0.13
UBC-214ENST00000546271 HMGCRP04035 888 aa14.24□□□□□ -0.13
UBC-214ENST00000546271 CYP2B6P20813 491 aa14.24□□□□□ -0.13
UBC-214ENST00000546271 ALX1Q15699 326 aa14.24□□□□□ -0.13
UBC-214ENST00000546271 ZNF589Q86UQ0 364 aaPredicted RBP14.24□□□□□ -0.13
UBC-214ENST00000546271 SOCS4Q8WXH5 440 aa14.24□□□□□ -0.13
UBC-214ENST00000546271 DEFB118Q96PH6 123 aa14.24□□□□□ -0.13
UBC-214ENST00000546271 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.24□□□□□ -0.133e-7■■□□□ 11.9
UBC-214ENST00000546271 GOPCQ9HD26 462 aa14.24□□□□□ -0.13
UBC-214ENST00000546271 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
UBC-214ENST00000546271 CCDC171Q6TFL3 1326 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 ZNF236Q9UL36 1845 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 FLOT1O75955 427 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 HSPD1P10809 573 aaKnown RBP14.23□□□□□ -0.13
UBC-214ENST00000546271 DSG3P32926 999 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 CCNA1P78396 465 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 CTDSPL2Q05D32 466 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 GPR142Q7Z601 462 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 NEDD1Q8NHV4 660 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 CEP95Q96GE4 821 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 NUDT12Q9BQG2 462 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 ANAPC4Q9UJX5 808 aa14.23□□□□□ -0.13
UBC-214ENST00000546271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.23□□□□□ -0.13
UBC-214ENST00000546271 PLIN4Q96Q06 1357 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 SGPL1O95470 568 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 FGAP02671 866 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 TFRCP02786 760 aaKnown RBP14.22□□□□□ -0.13
UBC-214ENST00000546271 TSPY3P0CV98 308 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 TSPY8P0CW00 308 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 ZKSCAN1P17029 563 aaPredicted RBP14.22□□□□□ -0.13
UBC-214ENST00000546271 TFAP4Q01664 338 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 TRIM32Q13049 653 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 FAM47AQ5JRC9 791 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
UBC-214ENST00000546271 PLEKHH3Q7Z736 793 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 TRIB2Q92519 343 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 DPF3Q92784 378 aa14.22□□□□□ -0.13
UBC-214ENST00000546271 ATG4CQ96DT6 458 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms