RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 EVI5O60447 810 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 HMMRO75330 724 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 IFIT2P09913 472 aaKnown RBP10.26□□□□□ -0.77
USP28-215ENST00000545608 MAPK4P31152 587 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 USP17L24Q0WX57 530 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 SLFNL1Q499Z3 407 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 MORN1Q5T089 497 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 MAP3K21Q5TCX8 1036 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 CATSPERGQ6ZRH7 1159 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 GPR142Q7Z601 462 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 LCORLQ8N3X6 602 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 SDR42E1Q8WUS8 393 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 SOCS4Q8WXH5 440 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 FEZ1Q99689 392 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 KIAA1683Q9H0B3 1180 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 PRO3102Q9H379 93 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 CABP5Q9NP86 173 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 BMP2KQ9NSY1 1161 aaPredicted RBP10.26□□□□□ -0.77
USP28-215ENST00000545608 DDX19BQ9UMR2 479 aa10.26□□□□□ -0.77
USP28-215ENST00000545608 CDK5RAP2Q96SN8 1893 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 RAB11FIP3O75154 756 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 CYP2D6P10635 497 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 XRCC5P13010 732 aaKnown RBP10.25□□□□□ -0.77
USP28-215ENST00000545608 VCAM1P19320 739 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 CLCN6P51797 869 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 USP14P54578 494 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 SEPT2Q15019 361 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 CCL14Q16627 93 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 NECAB2Q7Z6G3 386 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 PLEKHH3Q7Z736 793 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 CCAR1Q8IX12 1150 aaKnown RBP10.25□□□□□ -0.77
USP28-215ENST00000545608 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 GTF3C2Q8WUA4 911 aaPredicted RBP10.25□□□□□ -0.77
USP28-215ENST00000545608 CRNKL1Q9BZJ0 848 aaKnown RBP10.25□□□□□ -0.77
USP28-215ENST00000545608 BOLA2Q9H3K6 86 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 ARMT1Q9H993 441 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 DCP1AQ9NPI6 582 aaPredicted RBP10.25□□□□□ -0.77
USP28-215ENST00000545608 MCM9Q9NXL9 1143 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 RABGAP1Q9Y3P9 1069 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 TRIOBPQ9H2D6 2365 aa10.25□□□□□ -0.77
USP28-215ENST00000545608 FOCADQ5VW36 1801 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 A0A1W2PRG0 241 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 SMIM22K7EJ46 135 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 PRKAB2O43741 272 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 CHGBP05060 677 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 CACNB2Q08289 660 aaPredicted RBP10.24□□□□□ -0.77
USP28-215ENST00000545608 PDE3AQ14432 1141 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 SLC44A5Q8NCS7 719 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 DYNLL2Q96FJ2 89 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 RPAP3Q9H6T3 665 aaPredicted RBP10.24□□□□□ -0.77
USP28-215ENST00000545608 SLC24A3Q9HC58 644 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 PAG1Q9NWQ8 432 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 BTBD7Q9P203 1132 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 STAP2Q9UGK3 403 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 RCAN3Q9UKA8 241 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 OGDHLQ9ULD0 1010 aa10.24□□□□□ -0.77
USP28-215ENST00000545608 SPDYE16A6NNV3 312 aaPredicted RBP10.23□□□□□ -0.77
USP28-215ENST00000545608 MPHOSPH10O00566 681 aaKnown RBP10.23□□□□□ -0.77
USP28-215ENST00000545608 ZKSCAN1P17029 563 aaPredicted RBP10.23□□□□□ -0.77
USP28-215ENST00000545608 ATP5JP18859 108 aa10.23□□□□□ -0.77
USP28-215ENST00000545608 PTPREP23469 700 aa10.23□□□□□ -0.77
USP28-215ENST00000545608 CCND3P30281 292 aaPredicted RBP10.23□□□□□ -0.77
USP28-215ENST00000545608 ADD2P35612 726 aa10.23□□□□□ -0.77
USP28-215ENST00000545608 RGS2P41220 211 aa10.23□□□□□ -0.77
USP28-215ENST00000545608 MAP2K5Q13163 448 aa10.23□□□□□ -0.77
USP28-215ENST00000545608 C20orf194Q5TEA3 1177 aa10.23□□□□□ -0.77
USP28-215ENST00000545608 LBX2Q6XYB7 198 aa10.23□□□□□ -0.77
USP28-215ENST00000545608 TRMT44Q8IYL2 757 aaKnown RBP10.23□□□□□ -0.77
USP28-215ENST00000545608 NBPF3Q9H094 633 aa10.23□□□□□ -0.77
USP28-215ENST00000545608 FLRT1Q9NZU1 646 aa10.23□□□□□ -0.77
USP28-215ENST00000545608 PLXNB2O15031 1838 aa10.23□□□□□ -0.77
USP28-215ENST00000545608 CYP2D7A0A087X1C5 515 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 SMARCA5O60264 1052 aaPredicted RBP10.22□□□□□ -0.77
USP28-215ENST00000545608 ZMYND10O75800 440 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 MBD4O95243 580 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 CCNA1P78396 465 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 KIAA1755Q5JYT7 1200 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 WDR78Q5VTH9 848 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 LHX8Q68G74 356 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 SIAH1Q8IUQ4 282 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 C7orf61Q8IZ16 206 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 APBA2Q99767 749 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 HAUS7Q99871 368 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 C11orf49Q9H6J7 331 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 CWC22Q9HCG8 908 aaKnown RBP10.22□□□□□ -0.77
USP28-215ENST00000545608 ZMYND8Q9ULU4 1186 aaPredicted RBP10.22□□□□□ -0.77
USP28-215ENST00000545608 MYH1P12882 1939 aa10.22□□□□□ -0.77
USP28-215ENST00000545608 SLC15A5A6NIM6 579 aa10.21□□□□□ -0.77
USP28-215ENST00000545608 GLRX3O76003 335 aaKnown RBP10.21□□□□□ -0.77
USP28-215ENST00000545608 AKR1B1P15121 316 aa10.21□□□□□ -0.77
USP28-215ENST00000545608 COG2Q14746 738 aa10.21□□□□□ -0.77
USP28-215ENST00000545608 C12orf60Q5U649 245 aa10.21□□□□□ -0.77
USP28-215ENST00000545608 TMEM179Q6ZVK1 233 aa10.21□□□□□ -0.77
USP28-215ENST00000545608 CLEC10AQ8IUN9 316 aa10.21□□□□□ -0.77
USP28-215ENST00000545608 NPLOC4Q8TAT6 608 aa10.21□□□□□ -0.77
USP28-215ENST00000545608 TMC2Q8TDI7 906 aa10.21□□□□□ -0.77
USP28-215ENST00000545608 CHMP4BQ9H444 224 aaKnown RBP10.21□□□□□ -0.77
USP28-215ENST00000545608 ATP8A2Q9NTI2 1148 aa10.21□□□□□ -0.77
USP28-215ENST00000545608 SWAP70Q9UH65 585 aa10.21□□□□□ -0.77
USP28-215ENST00000545608 PFASO15067 1338 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms