RNA–Protein interactions for RNA: ENST00000545180.5

SPHK1-203, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SPHK1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-203ENST00000545180 NEMFO60524 1076 aa23.12■■□□□ 1.29
SPHK1-203ENST00000545180 VEGFAP15692 232 aaPredicted RBP23.12■■□□□ 1.29
SPHK1-203ENST00000545180 USP49Q70CQ1 688 aa23.12■■□□□ 1.29
SPHK1-203ENST00000545180 FERMT2Q96AC1 680 aa23.12■■□□□ 1.29
SPHK1-203ENST00000545180 PPEF1O14829 653 aaPredicted RBP23.12■■□□□ 1.29
SPHK1-203ENST00000545180 TTC38Q5R3I4 469 aa23.12■■□□□ 1.29
SPHK1-203ENST00000545180 KANK3Q6NY19 840 aa23.12■■□□□ 1.29
SPHK1-203ENST00000545180 OLFM4Q6UX06 510 aa23.12■■□□□ 1.29
SPHK1-203ENST00000545180 ACTN4O43707 911 aaKnown RBP23.11■■□□□ 1.29
SPHK1-203ENST00000545180 GNAQP50148 359 aa23.11■■□□□ 1.29
SPHK1-203ENST00000545180 RHBDL3P58872 404 aa23.11■■□□□ 1.29
SPHK1-203ENST00000545180 ZNF174Q15697 407 aa23.11■■□□□ 1.29
SPHK1-203ENST00000545180 NT5DC1Q5TFE4 455 aa23.11■■□□□ 1.29
SPHK1-203ENST00000545180 STAG2Q8N3U4 1231 aa23.11■■□□□ 1.29
SPHK1-203ENST00000545180 XPO4Q9C0E2 1151 aaKnown RBP23.11■■□□□ 1.29
SPHK1-203ENST00000545180 HSD3B7Q9H2F3 369 aa23.11■■□□□ 1.29
SPHK1-203ENST00000545180 IFNKQ9P0W0 207 aa23.11■■□□□ 1.29
SPHK1-203ENST00000545180 MAD2L2Q9UI95 211 aa23.11■■□□□ 1.29
SPHK1-203ENST00000545180 GAKO14976 1311 aa23.11■■□□□ 1.29
SPHK1-203ENST00000545180 FAM205AQ6ZU69 1335 aa23.11■■□□□ 1.29
SPHK1-203ENST00000545180 MYL5Q02045 173 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 C16orf86Q6ZW13 317 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 FILIP1Q7Z7B0 1213 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 PDILTQ8N807 584 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 SH3GLB2Q9NR46 395 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 LRRC37AA6NMS7 1700 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 LTBP1Q14766 1721 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 SMC2O95347 1197 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 BMP6P22004 513 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 TRAPPC10P48553 1259 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 SARSP49591 514 aaKnown RBP23.1■■□□□ 1.29
SPHK1-203ENST00000545180 ARID5BQ14865 1188 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 FLT1P17948 1338 aa23.1■■□□□ 1.29
SPHK1-203ENST00000545180 UQCRHLA0A096LP55 91 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 UQCRHP07919 91 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 CALML3P27482 149 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 LMOD1P29536 600 aaPredicted RBP23.09■■□□□ 1.29
SPHK1-203ENST00000545180 CDK8P49336 464 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 TMEM47Q9BQJ4 181 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 IMPACTQ9P2X3 320 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 MAN1B1Q9UKM7 699 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 ATP6V0A2Q9Y487 856 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 PRR29P0C7W0 189 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 PIK3AP1Q6ZUJ8 805 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 PRIMPOLQ96LW4 560 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 CDK5RAP2Q96SN8 1893 aa23.09■■□□□ 1.29
SPHK1-203ENST00000545180 BAZ2BQ9UIF8 2168 aaKnown RBP23.09■■□□□ 1.29
SPHK1-203ENST00000545180 ATP2C1P98194 919 aaPredicted RBP23.08■■□□□ 1.29
SPHK1-203ENST00000545180 SMARCE1Q969G3 411 aa23.08■■□□□ 1.29
SPHK1-203ENST00000545180 EPSTI1Q96J88 318 aa23.08■■□□□ 1.29
SPHK1-203ENST00000545180 OSBPL5Q9H0X9 879 aaPredicted RBP23.08■■□□□ 1.29
SPHK1-203ENST00000545180 STX8Q9UNK0 236 aa23.08■■□□□ 1.29
SPHK1-203ENST00000545180 GSDMDP57764 484 aa23.08■■□□□ 1.28
SPHK1-203ENST00000545180 GTF2IP78347 998 aa23.08■■□□□ 1.28
SPHK1-203ENST00000545180 FANCCQ00597 558 aa23.08■■□□□ 1.28
SPHK1-203ENST00000545180 PTGDRQ13258 359 aa23.08■■□□□ 1.28
SPHK1-203ENST00000545180 NLGN1Q8N2Q7 840 aa23.08■■□□□ 1.28
SPHK1-203ENST00000545180 DDX60LQ5H9U9 1706 aaKnown RBP23.07■■□□□ 1.28
SPHK1-203ENST00000545180 ADAMTS3O15072 1205 aa23.07■■□□□ 1.28
SPHK1-203ENST00000545180 ZNF827Q17R98 1081 aa23.07■■□□□ 1.28
SPHK1-203ENST00000545180 GRAMD1CQ8IYS0 662 aa23.07■■□□□ 1.28
SPHK1-203ENST00000545180 BLIDQ8IZY5 108 aa23.07■■□□□ 1.28
SPHK1-203ENST00000545180 SYMPKQ92797 1274 aaKnown RBP23.07■■□□□ 1.28
SPHK1-203ENST00000545180 GPKOWQ92917 476 aaPredicted RBP eCLIP23.07■■□□□ 1.28
SPHK1-203ENST00000545180 EYA3Q99504 573 aa23.07■■□□□ 1.28
SPHK1-203ENST00000545180 COA1Q9GZY4 146 aa23.07■■□□□ 1.28
SPHK1-203ENST00000545180 SNED1Q8TER0 1413 aa23.07■■□□□ 1.28
SPHK1-203ENST00000545180 A0A087X0B3 334 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 SLC35G1Q2M3R5 365 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 TRIML1Q8N9V2 468 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 NEDD1Q8NHV4 660 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 PALM3A6NDB9 673 aaPredicted RBP23.06■■□□□ 1.28
SPHK1-203ENST00000545180 RIMBP2O15034 1052 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 MYO1BO43795 1136 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 SRGNP10124 158 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 ATP1A3P13637 1013 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 MORC3Q14149 939 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 SPATA20Q8TB22 786 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 DHX58Q96C10 678 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 CCDC34Q96HJ3 373 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 PCDHA4Q9UN74 947 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 DAGLAQ9Y4D2 1042 aa23.06■■□□□ 1.28
SPHK1-203ENST00000545180 COL23A1Q86Y22 540 aaPredicted RBP23.05■■□□□ 1.28
SPHK1-203ENST00000545180 MLKLQ8NB16 471 aa23.05■■□□□ 1.28
SPHK1-203ENST00000545180 ANKRD31Q8N7Z5 1873 aa23.05■■□□□ 1.28
SPHK1-203ENST00000545180 CYTH3O43739 400 aa23.05■■□□□ 1.28
SPHK1-203ENST00000545180 SLFN14P0C7P3 912 aa23.05■■□□□ 1.28
SPHK1-203ENST00000545180 SKILP12757 684 aa23.05■■□□□ 1.28
SPHK1-203ENST00000545180 NPR1P16066 1061 aa23.05■■□□□ 1.28
SPHK1-203ENST00000545180 AKT1S1Q96B36 256 aa23.05■■□□□ 1.28
SPHK1-203ENST00000545180 LZTS2Q9BRK4 669 aa23.05■■□□□ 1.28
SPHK1-203ENST00000545180 VWA3AA6NCI4 1184 aa23.04■■□□□ 1.28
SPHK1-203ENST00000545180 CCZ1BP86790 482 aa23.04■■□□□ 1.28
SPHK1-203ENST00000545180 CCZ1P86791 482 aaPredicted RBP23.04■■□□□ 1.28
SPHK1-203ENST00000545180 MYRIPQ8NFW9 859 aa23.04■■□□□ 1.28
SPHK1-203ENST00000545180 SUGT1Q9Y2Z0 365 aa23.04■■□□□ 1.28
SPHK1-203ENST00000545180 TYW1BQ6NUM6 668 aa23.04■■□□□ 1.28
SPHK1-203ENST00000545180 TMC6Q7Z403 805 aa23.04■■□□□ 1.28
SPHK1-203ENST00000545180 SH3RF1Q7Z6J0 888 aa23.04■■□□□ 1.28
SPHK1-203ENST00000545180 FANCLQ9NW38 375 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms