RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 ENDOUP21128 410 aaKnown RBP9.94□□□□□ -0.82
VPS13D-212ENST00000543766 EGFLAMQ63HQ2 1017 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 JAZF1Q86VZ6 243 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 FCHSD1Q86WN1 690 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 CCDC112Q8NEF3 446 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 GOLGA1Q92805 767 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 GLMNQ92990 594 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 ANKRD36BQ8N2N9 1353 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 GOLGA6L7A0A1B0GV03 622 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 LRRC72A6NJI9 287 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 STXBP3O00186 592 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 ZSCAN22P10073 491 aaPredicted RBP9.94□□□□□ -0.82
VPS13D-212ENST00000543766 NFKBIAP25963 317 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 CETN2P41208 172 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 KSR2Q6VAB6 950 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 SMARCE1Q969G3 411 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 KRT82Q9NSB4 513 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 PFDN2Q9UHV9 154 aa9.94□□□□□ -0.82
VPS13D-212ENST00000543766 ST5P78524 1137 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 ANO1Q5XXA6 986 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 C1orf228Q6PIY5 440 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 TADA2BQ86TJ2 420 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 NFATC2IPQ8NCF5 419 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 ZNF397Q8NF99 534 aaPredicted RBP9.93□□□□□ -0.82
VPS13D-212ENST00000543766 DKK3Q9UBP4 350 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 ADGRB3O60242 1522 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 ADGRB2O60241 1585 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 LDHBP07195 334 aaKnown RBP9.93□□□□□ -0.82
VPS13D-212ENST00000543766 IDEP14735 1019 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 PSMC4P43686 418 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 IRGCQ6NXR0 463 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 GOT1L1Q8NHS2 421 aaPredicted RBP9.93□□□□□ -0.82
VPS13D-212ENST00000543766 PPP1R14CQ8TAE6 165 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 LPIN2Q92539 896 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 GCC1Q96CN9 775 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 CTAGE1Q96RT6 745 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 GLT8D2Q9H1C3 349 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 CNNM2Q9H8M5 875 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 PFDN4Q9NQP4 134 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 TRIM64A6NGJ6 449 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 TRIM64BA6NI03 449 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 LRRC10BA6NIK2 292 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 SUPT3HO75486 399 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 ATP6V1E1P36543 226 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 BBS9Q3SYG4 887 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 CCDC40Q4G0X9 1142 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 CCDC102AQ96A19 550 aa9.93□□□□□ -0.82
VPS13D-212ENST00000543766 A0A1W2PRQ8 180 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 SYCE3A1L190 88 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 GOLGA8IPA6NC78 632 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 SYNDIG1LA6NDD5 238 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 PCP4L1A6NKN8 68 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 OPA1O60313 960 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 MYBL1P10243 752 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 MVPQ14764 893 aaKnown RBP9.92□□□□□ -0.82
VPS13D-212ENST00000543766 WDR43Q15061 677 aaKnown RBP eCLIP9.92□□□□□ -0.82
VPS13D-212ENST00000543766 CCBE1Q6UXH8 406 aaPredicted RBP9.92□□□□□ -0.82
VPS13D-212ENST00000543766 CCDC150Q8NCX0 1101 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 MTMR12Q9C0I1 747 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 PLCB1Q9NQ66 1216 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 SETBP1Q9Y6X0 1596 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 GOLGA8JA6NMD2 632 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 GOLGA8TH3BQL2 631 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 GOLGA8HP0CJ92 632 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 HOXD10P28358 340 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 CCNG2Q16589 344 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 AFAP1Q8N556 730 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 STON2Q8WXE9 905 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 HVCN1Q96D96 273 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 PAWRQ96IZ0 340 aaKnown RBP9.92□□□□□ -0.82
VPS13D-212ENST00000543766 MAELQ96JY0 434 aaKnown RBP9.92□□□□□ -0.82
VPS13D-212ENST00000543766 NACAP1Q9BZK3 213 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 KCNF1Q9H3M0 494 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 LUC7L2Q9Y383 392 aaKnown RBP9.92□□□□□ -0.82
VPS13D-212ENST00000543766 PIK3C2BO00750 1634 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 PAHP00439 452 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 EZRP15311 586 aaKnown RBP9.92□□□□□ -0.82
VPS13D-212ENST00000543766 ALG1Q9BT22 464 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 PCDH12Q9NPG4 1184 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 MTUS1Q9ULD2 1270 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 PLEKHG2Q9H7P9 1386 aa9.92□□□□□ -0.82
VPS13D-212ENST00000543766 C21orf2O43822 256 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 UBXN2AP68543 259 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 PKP1Q13835 747 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 BMP2KLQ5H9B9 411 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 CEP128Q6ZU80 1094 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 CEP70Q8NHQ1 597 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 KIF1BPQ96EK5 621 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 CDK5RAP3Q96JB5 506 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 NDEL1Q9GZM8 345 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 PPLO60437 1756 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 LTBP4Q8N2S1 1624 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 ALKQ9UM73 1620 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 APAF1O14727 1248 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 TEX28O15482 410 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 KLHL41O60662 606 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 LGR5O75473 907 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 EPN2O95208 641 aa9.91□□□□□ -0.82
VPS13D-212ENST00000543766 AGR2O95994 175 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 494.2 ms