RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 SBK1Q52WX2 424 aa24.23■■□□□ 1.47
DDB1-220ENST00000542337 ANKRD45Q5TZF3 282 aa24.23■■□□□ 1.47
DDB1-220ENST00000542337 MKNK2Q9HBH9 465 aa24.23■■□□□ 1.47
DDB1-220ENST00000542337 TMX2Q9Y320 296 aa24.23■■□□□ 1.47
DDB1-220ENST00000542337 GSG1L2A8MUP6 293 aa24.22■■□□□ 1.47
DDB1-220ENST00000542337 MINDY4BA8MYZ0 360 aa24.22■■□□□ 1.47
DDB1-220ENST00000542337 CNMDO75829 334 aa24.22■■□□□ 1.47
DDB1-220ENST00000542337 MX1P20591 662 aa24.22■■□□□ 1.47
DDB1-220ENST00000542337 MORN1Q5T089 497 aa24.22■■□□□ 1.47
DDB1-220ENST00000542337 POTEEQ6S8J3 1075 aa24.22■■□□□ 1.47
DDB1-220ENST00000542337 TRIB2Q92519 343 aa24.22■■□□□ 1.47
DDB1-220ENST00000542337 FSD1Q9BTV5 496 aa24.22■■□□□ 1.47
DDB1-220ENST00000542337 ZNF287Q9HBT7 754 aa24.22■■□□□ 1.47
DDB1-220ENST00000542337 GPAA1O43292 621 aa24.21■■□□□ 1.47
DDB1-220ENST00000542337 TDO2P48775 406 aa24.21■■□□□ 1.47
DDB1-220ENST00000542337 AAMPQ13685 434 aa24.21■■□□□ 1.47
DDB1-220ENST00000542337 UBE2Q1Q7Z7E8 422 aa24.21■■□□□ 1.47
DDB1-220ENST00000542337 APBA2Q99767 749 aa24.21■■□□□ 1.47
DDB1-220ENST00000542337 NACAP1Q9BZK3 213 aa24.21■■□□□ 1.47
DDB1-220ENST00000542337 CRISPLD2Q9H0B8 497 aa24.21■■□□□ 1.47
DDB1-220ENST00000542337 VCPKMTQ9H867 229 aa24.21■■□□□ 1.47
DDB1-220ENST00000542337 SLC15A5A6NIM6 579 aa24.2■■□□□ 1.46
DDB1-220ENST00000542337 MAP2K5Q13163 448 aa24.2■■□□□ 1.46
DDB1-220ENST00000542337 MB21D1Q8N884 522 aa24.2■■□□□ 1.46
DDB1-220ENST00000542337 USP6NLQ92738 828 aa24.2■■□□□ 1.46
DDB1-220ENST00000542337 GOPCQ9HD26 462 aa24.2■■□□□ 1.46
DDB1-220ENST00000542337 BTBD7Q9P203 1132 aa24.2■■□□□ 1.46
DDB1-220ENST00000542337 NR2E3Q9Y5X4 410 aa24.2■■□□□ 1.46
DDB1-220ENST00000542337 DOCK3Q8IZD9 2030 aa24.19■■□□□ 1.46
DDB1-220ENST00000542337 PATL2C9JE40 543 aaKnown RBP24.19■■□□□ 1.46
DDB1-220ENST00000542337 SMIM22K7EJ46 135 aa24.19■■□□□ 1.46
DDB1-220ENST00000542337 WDR46O15213 610 aaKnown RBP24.19■■□□□ 1.46
DDB1-220ENST00000542337 FLOT1O75955 427 aa24.19■■□□□ 1.46
DDB1-220ENST00000542337 EEF2P13639 858 aaKnown RBP24.19■■□□□ 1.46
DDB1-220ENST00000542337 PRKAR2AP13861 404 aaKnown RBP24.19■■□□□ 1.46
DDB1-220ENST00000542337 PTPREP23469 700 aa24.19■■□□□ 1.46
DDB1-220ENST00000542337 TRIM32Q13049 653 aa24.19■■□□□ 1.46
DDB1-220ENST00000542337 SIAH1Q8IUQ4 282 aa24.19■■□□□ 1.46
DDB1-220ENST00000542337 SPICE1Q8N0Z3 855 aa24.19■■□□□ 1.46
DDB1-220ENST00000542337 PI4K2BQ8TCG2 481 aa24.19■■□□□ 1.46
DDB1-220ENST00000542337 H0YGN5 161 aa24.18■■□□□ 1.46
DDB1-220ENST00000542337 RAD21O60216 631 aa24.18■■□□□ 1.46
DDB1-220ENST00000542337 DSG3P32926 999 aa24.18■■□□□ 1.46
DDB1-220ENST00000542337 HDAC1Q13547 482 aaPredicted RBP24.18■■□□□ 1.46
DDB1-220ENST00000542337 CLEC10AQ8IUN9 316 aa24.18■■□□□ 1.46
DDB1-220ENST00000542337 STK11IPQ8N1F8 1099 aa24.18■■□□□ 1.46
DDB1-220ENST00000542337 ANKLE1Q8NAG6 615 aa24.18■■□□□ 1.46
DDB1-220ENST00000542337 OTUD7AQ8TE49 926 aaPredicted RBP24.18■■□□□ 1.46
DDB1-220ENST00000542337 M0R2C6 588 aa24.17■■□□□ 1.46
DDB1-220ENST00000542337 STRNO43815 780 aa24.17■■□□□ 1.46
DDB1-220ENST00000542337 PLS1Q14651 629 aa24.17■■□□□ 1.46
DDB1-220ENST00000542337 MAP3K21Q5TCX8 1036 aa24.17■■□□□ 1.46
DDB1-220ENST00000542337 MFSD14CQ5VZR4 134 aa24.17■■□□□ 1.46
DDB1-220ENST00000542337 SAMD1Q6SPF0 538 aaPredicted RBP24.17■■□□□ 1.46
DDB1-220ENST00000542337 NECAB2Q7Z6G3 386 aa24.17■■□□□ 1.46
DDB1-220ENST00000542337 ZNF444Q8N0Y2 327 aaPredicted RBP24.17■■□□□ 1.46
DDB1-220ENST00000542337 MYH7P12883 1935 aa24.17■■□□□ 1.46
DDB1-220ENST00000542337 SLC3A2P08195 630 aaKnown RBP24.16■■□□□ 1.46
DDB1-220ENST00000542337 KIAA1755Q5JYT7 1200 aa24.16■■□□□ 1.46
DDB1-220ENST00000542337 SPATC1LQ9H0A9 340 aa24.16■■□□□ 1.46
DDB1-220ENST00000542337 CACNB2Q08289 660 aaPredicted RBP24.15■■□□□ 1.46
DDB1-220ENST00000542337 HABP4Q5JVS0 413 aaKnown RBP24.15■■□□□ 1.46
DDB1-220ENST00000542337 DPP9Q86TI2 863 aa24.15■■□□□ 1.46
DDB1-220ENST00000542337 IFNL3Q8IZI9 196 aa24.15■■□□□ 1.46
DDB1-220ENST00000542337 SHCBP1Q8NEM2 672 aa24.15■■□□□ 1.46
DDB1-220ENST00000542337 PAWRQ96IZ0 340 aaKnown RBP24.15■■□□□ 1.46
DDB1-220ENST00000542337 MOV10L1Q9BXT6 1211 aaKnown RBP24.15■■□□□ 1.46
DDB1-220ENST00000542337 BAZ2AQ9UIF9 1905 aaKnown RBP24.15■■□□□ 1.46
DDB1-220ENST00000542337 RASA1P20936 1047 aa24.14■■□□□ 1.45
DDB1-220ENST00000542337 GRB14Q14449 540 aa24.14■■□□□ 1.45
DDB1-220ENST00000542337 CCL14Q16627 93 aa24.14■■□□□ 1.45
DDB1-220ENST00000542337 ZMYM1Q5SVZ6 1142 aa24.14■■□□□ 1.45
DDB1-220ENST00000542337 NAPBQ9H115 298 aa24.14■■□□□ 1.45
DDB1-220ENST00000542337 RWDD1Q9H446 243 aaPredicted RBP24.14■■□□□ 1.45
DDB1-220ENST00000542337 MROH8Q9H579 483 aa24.14■■□□□ 1.45
DDB1-220ENST00000542337 SLC5A4Q9NY91 659 aa24.14■■□□□ 1.45
DDB1-220ENST00000542337 EVI5O60447 810 aa24.13■■□□□ 1.45
DDB1-220ENST00000542337 HOXC6P09630 235 aa24.13■■□□□ 1.45
DDB1-220ENST00000542337 PDE4BQ07343 736 aa24.13■■□□□ 1.45
DDB1-220ENST00000542337 NCAPG2Q86XI2 1143 aa24.13■■□□□ 1.45
DDB1-220ENST00000542337 EVI5LQ96CN4 794 aa24.13■■□□□ 1.45
DDB1-220ENST00000542337 ATG4CQ96DT6 458 aa24.13■■□□□ 1.45
DDB1-220ENST00000542337 NBPF3Q9H094 633 aa24.13■■□□□ 1.45
DDB1-220ENST00000542337 NYAP2Q9P242 653 aa24.13■■□□□ 1.45
DDB1-220ENST00000542337 ERCC3P19447 782 aa24.12■■□□□ 1.45
DDB1-220ENST00000542337 SEC62Q99442 399 aaKnown RBP24.12■■□□□ 1.45
DDB1-220ENST00000542337 EPB41L4AQ9HCS5 686 aaPredicted RBP24.12■■□□□ 1.45
DDB1-220ENST00000542337 STAP2Q9UGK3 403 aa24.12■■□□□ 1.45
DDB1-220ENST00000542337 OGDHLQ9ULD0 1010 aa24.12■■□□□ 1.45
DDB1-220ENST00000542337 ROBO3Q96MS0 1386 aa24.12■■□□□ 1.45
DDB1-220ENST00000542337 SLC25A27O95847 323 aa24.11■■□□□ 1.45
DDB1-220ENST00000542337 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.11■■□□□ 1.45
DDB1-220ENST00000542337 ADORA2AP29274 412 aa24.1■■□□□ 1.45
DDB1-220ENST00000542337 PDE1AP54750 535 aa24.1■■□□□ 1.45
DDB1-220ENST00000542337 CLIP2Q9UDT6 1046 aa24.1■■□□□ 1.45
DDB1-220ENST00000542337 COLQQ9Y215 455 aaPredicted RBP24.1■■□□□ 1.45
DDB1-220ENST00000542337 MYH8P13535 1937 aa24.1■■□□□ 1.45
DDB1-220ENST00000542337 PLXNB2O15031 1838 aa24.1■■□□□ 1.45
DDB1-220ENST00000542337 SALL3Q9BXA9 1300 aa24.1■■□□□ 1.45
DDB1-220ENST00000542337 PRDM1O75626 825 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms