RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 LAMA3Q16787 3333 aa19.78■□□□□ 0.76
UBC-208ENST00000540700 COL6A3P12111 3177 aa19.78■□□□□ 0.76
UBC-208ENST00000540700 ATAD5Q96QE3 1844 aa19.77■□□□□ 0.76
UBC-208ENST00000540700 GREB1LQ9C091 1923 aaPredicted RBP19.77■□□□□ 0.76
UBC-208ENST00000540700 ORC4O43929 436 aa19.77■□□□□ 0.76
UBC-208ENST00000540700 FARP2O94887 1054 aaPredicted RBP19.77■□□□□ 0.76
UBC-208ENST00000540700 UBXN2AP68543 259 aa19.77■□□□□ 0.76
UBC-208ENST00000540700 PRO3102Q9H379 93 aa19.77■□□□□ 0.76
UBC-208ENST00000540700 E7EWF7 191 aa19.76■□□□□ 0.75
UBC-208ENST00000540700 PTPRAP18433 802 aa19.76■□□□□ 0.75
UBC-208ENST00000540700 ABCB5Q2M3G0 1257 aa19.76■□□□□ 0.75
UBC-208ENST00000540700 RRP12Q5JTH9 1297 aaKnown RBP19.76■□□□□ 0.75
UBC-208ENST00000540700 U2AF1L4Q8WU68 220 aaKnown RBP19.76■□□□□ 0.75
UBC-208ENST00000540700 UNC93B1Q9H1C4 597 aa19.76■□□□□ 0.75
UBC-208ENST00000540700 MKNK2Q9HBH9 465 aa19.76■□□□□ 0.75
UBC-208ENST00000540700 TAOK2Q9UL54 1235 aa19.76■□□□□ 0.75
UBC-208ENST00000540700 ADGRA2Q96PE1 1338 aa19.76■□□□□ 0.75
UBC-208ENST00000540700 PHIPQ8WWQ0 1821 aa19.75■□□□□ 0.75
UBC-208ENST00000540700 IGKV6D-41A0A0C4DH26 115 aa19.75■□□□□ 0.75
UBC-208ENST00000540700 B4E1Z4 1266 aa19.75■□□□□ 0.75
UBC-208ENST00000540700 SLC3A2P08195 630 aaKnown RBP19.75■□□□□ 0.75
UBC-208ENST00000540700 CYP2C8P10632 490 aa19.75■□□□□ 0.75
UBC-208ENST00000540700 FCGRTP55899 365 aa19.75■□□□□ 0.75
UBC-208ENST00000540700 PDE4BQ07343 736 aa19.75■□□□□ 0.75
UBC-208ENST00000540700 SEPT2Q15019 361 aa19.75■□□□□ 0.75
UBC-208ENST00000540700 ADCK5Q3MIX3 580 aa19.75■□□□□ 0.75
UBC-208ENST00000540700 MFSD6Q6ZSS7 791 aa19.75■□□□□ 0.75
UBC-208ENST00000540700 SIAH1Q8IUQ4 282 aa19.75■□□□□ 0.75
UBC-208ENST00000540700 PLIN4Q96Q06 1357 aa19.74■□□□□ 0.75
UBC-208ENST00000540700 MPHOSPH10O00566 681 aaKnown RBP19.74■□□□□ 0.75
UBC-208ENST00000540700 SOX1O00570 391 aaPredicted RBP19.74■□□□□ 0.75
UBC-208ENST00000540700 TFAP4Q01664 338 aa19.74■□□□□ 0.75
UBC-208ENST00000540700 CYB5R4Q7L1T6 521 aa19.74■□□□□ 0.75
UBC-208ENST00000540700 PARK7Q99497 189 aaKnown RBP19.74■□□□□ 0.75
UBC-208ENST00000540700 BACH2Q9BYV9 841 aa19.74■□□□□ 0.75
UBC-208ENST00000540700 IL17RBQ9NRM6 502 aa19.74■□□□□ 0.75
UBC-208ENST00000540700 GABRQQ9UN88 632 aa19.74■□□□□ 0.75
UBC-208ENST00000540700 KCNH4Q9UQ05 1017 aa19.74■□□□□ 0.75
UBC-208ENST00000540700 SNX14Q9Y5W7 946 aa19.74■□□□□ 0.75
UBC-208ENST00000540700 MYH8P13535 1937 aa19.73■□□□□ 0.75
UBC-208ENST00000540700 EPB41L2O43491 1005 aaKnown RBP19.73■□□□□ 0.75
UBC-208ENST00000540700 EVI5O60447 810 aa19.73■□□□□ 0.75
UBC-208ENST00000540700 NMT2O60551 498 aa19.73■□□□□ 0.75
UBC-208ENST00000540700 MOGSQ13724 837 aa19.73■□□□□ 0.75
UBC-208ENST00000540700 LRCH3Q96II8 777 aa19.73■□□□□ 0.75
UBC-208ENST00000540700 CCDC17Q96LX7 622 aa19.73■□□□□ 0.75
UBC-208ENST00000540700 TOMM22Q9NS69 142 aa19.73■□□□□ 0.75
UBC-208ENST00000540700 RANBP6O60518 1105 aaKnown RBP19.72■□□□□ 0.75
UBC-208ENST00000540700 ASNSP08243 561 aa19.72■□□□□ 0.75
UBC-208ENST00000540700 ANTXR2P58335 489 aa19.72■□□□□ 0.75
UBC-208ENST00000540700 RAB3GAP1Q15042 981 aa19.72■□□□□ 0.75
UBC-208ENST00000540700 TSGA10IPQ3SY00 556 aa19.72■□□□□ 0.75
UBC-208ENST00000540700 MB21D2Q8IYB1 491 aaPredicted RBP19.72■□□□□ 0.75
UBC-208ENST00000540700 ZNF444Q8N0Y2 327 aaPredicted RBP19.72■□□□□ 0.75
UBC-208ENST00000540700 SLAIN1Q8ND83 568 aa19.72■□□□□ 0.75
UBC-208ENST00000540700 NEDD1Q8NHV4 660 aa19.72■□□□□ 0.75
UBC-208ENST00000540700 ACER1Q8TDN7 264 aa19.72■□□□□ 0.75
UBC-208ENST00000540700 RNF41Q9H4P4 317 aaPredicted RBP19.72■□□□□ 0.75
UBC-208ENST00000540700 PICK1Q9NRD5 415 aa19.72■□□□□ 0.75
UBC-208ENST00000540700 A0A1W2PRG0 241 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 KDM4AO75164 1064 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 SGPL1O95470 568 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 TFRCP02786 760 aaKnown RBP19.71■□□□□ 0.75
UBC-208ENST00000540700 BCRP11274 1271 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 PCP11498 1178 aaKnown RBP19.71■□□□□ 0.75
UBC-208ENST00000540700 ELNP15502 786 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 GPAT2Q6NUI2 795 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 TMEM179Q6ZVK1 233 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 CEP95Q96GE4 821 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 ZSWIM5Q9P217 1185 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 AFG3L2Q9Y4W6 797 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 ZHX2Q9Y6X8 837 aa19.71■□□□□ 0.75
UBC-208ENST00000540700 TSPY2A6NKD2 308 aa19.7■□□□□ 0.74
UBC-208ENST00000540700 USP17L5A8MUK1 530 aa19.7■□□□□ 0.74
UBC-208ENST00000540700 ADCY3O60266 1144 aa19.7■□□□□ 0.74
UBC-208ENST00000540700 TSPY3P0CV98 308 aa19.7■□□□□ 0.74
UBC-208ENST00000540700 TSPY8P0CW00 308 aa19.7■□□□□ 0.74
UBC-208ENST00000540700 ZKSCAN3Q9BRR0 538 aa19.7■□□□□ 0.74
UBC-208ENST00000540700 ZNF287Q9HBT7 754 aa19.7■□□□□ 0.74
UBC-208ENST00000540700 CABP5Q9NP86 173 aa19.7■□□□□ 0.74
UBC-208ENST00000540700 GINM1Q9NU53 330 aa19.7■□□□□ 0.74
UBC-208ENST00000540700 INHAP05111 366 aa19.69■□□□□ 0.74
UBC-208ENST00000540700 CPA1P15085 419 aa19.69■□□□□ 0.74
UBC-208ENST00000540700 NOVP48745 357 aa19.69■□□□□ 0.74
UBC-208ENST00000540700 CHST3Q7LGC8 479 aa19.69■□□□□ 0.74
UBC-208ENST00000540700 DEFB118Q96PH6 123 aa19.69■□□□□ 0.74
UBC-208ENST00000540700 WDR18Q9BV38 432 aa19.69■□□□□ 0.74
UBC-208ENST00000540700 TRIM75PA6NK02 468 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 EEF2P13639 858 aaKnown RBP19.68■□□□□ 0.74
UBC-208ENST00000540700 FLT3LGP49771 235 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 ICA1Q05084 483 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 SPP2Q13103 211 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 KIAA1755Q5JYT7 1200 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 RNF20Q5VTR2 975 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 RCSD1Q6JBY9 416 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 NCOA7Q8NI08 942 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 ESR2Q92731 530 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 KRT23Q9C075 422 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 CNNM2Q9H8M5 875 aa19.68■□□□□ 0.74
UBC-208ENST00000540700 GPHNQ9NQX3 736 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms