RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 PXYLP1Q8TE99 480 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 SH3TC2Q8TF17 1288 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 NAPBQ9H115 298 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 VCPKMTQ9H867 229 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 MKNK2Q9HBH9 465 aa20.52■□□□□ 0.88
SFSWAP-205ENST00000537164 A0A0D9SFI3 127 aa20.51■□□□□ 0.87
SFSWAP-205ENST00000537164 TRIM6-TRIM34B2RNG4 842 aa20.51■□□□□ 0.87
SFSWAP-205ENST00000537164 EEF2P13639 858 aaKnown RBP20.51■□□□□ 0.87
SFSWAP-205ENST00000537164 Q3C1V9 767 aa20.51■□□□□ 0.87
SFSWAP-205ENST00000537164 FAM227BQ96M60 508 aa20.51■□□□□ 0.87
SFSWAP-205ENST00000537164 GJD2Q9UKL4 321 aa20.51■□□□□ 0.87
SFSWAP-205ENST00000537164 MYH4Q9Y623 1939 aa20.51■□□□□ 0.87
SFSWAP-205ENST00000537164 PLIN4Q96Q06 1357 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 IGKV6D-41A0A0C4DH26 115 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 POTEFA5A3E0 1075 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 SPDYE16A6NNV3 312 aaPredicted RBP20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 CNMDO75829 334 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 PPARAQ07869 468 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 COG2Q14746 738 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 VPS53Q5VIR6 699 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 HOXC10Q9NYD6 342 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 NYAP2Q9P242 653 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 ANAPC4Q9UJX5 808 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 ZMYM6O95789 1325 aa20.5■□□□□ 0.87
SFSWAP-205ENST00000537164 WDR46O15213 610 aaKnown RBP20.49■□□□□ 0.87
SFSWAP-205ENST00000537164 ADCY3O60266 1144 aa20.49■□□□□ 0.87
SFSWAP-205ENST00000537164 PEX10O60683 326 aa20.49■□□□□ 0.87
SFSWAP-205ENST00000537164 SDSP20132 328 aa20.49■□□□□ 0.87
SFSWAP-205ENST00000537164 MAPK4P31152 587 aa20.49■□□□□ 0.87
SFSWAP-205ENST00000537164 PDE4BQ07343 736 aa20.49■□□□□ 0.87
SFSWAP-205ENST00000537164 RILPL2Q969X0 211 aa20.49■□□□□ 0.87
SFSWAP-205ENST00000537164 TMEM106CQ9BVX2 250 aa20.49■□□□□ 0.87
SFSWAP-205ENST00000537164 PDE4DIPQ5VU43 2346 aa20.49■□□□□ 0.87
SFSWAP-205ENST00000537164 SLC3A2P08195 630 aaKnown RBP20.48■□□□□ 0.87
SFSWAP-205ENST00000537164 PDE4AP27815 886 aa20.48■□□□□ 0.87
SFSWAP-205ENST00000537164 NMIQ13287 307 aaPredicted RBP20.48■□□□□ 0.87
SFSWAP-205ENST00000537164 ZNF444Q8N0Y2 327 aaPredicted RBP20.48■□□□□ 0.87
SFSWAP-205ENST00000537164 MKL1Q969V6 931 aa20.48■□□□□ 0.87
SFSWAP-205ENST00000537164 PAGR1Q9BTK6 254 aa20.48■□□□□ 0.87
SFSWAP-205ENST00000537164 PORCNQ9H237 461 aa20.48■□□□□ 0.87
SFSWAP-205ENST00000537164 SYNPO2Q9UMS6 1093 aa20.48■□□□□ 0.87
SFSWAP-205ENST00000537164 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.48■□□□□ 0.87
SFSWAP-205ENST00000537164 FGRP09769 529 aa20.47■□□□□ 0.87
SFSWAP-205ENST00000537164 CCNA1P78396 465 aa20.47■□□□□ 0.87
SFSWAP-205ENST00000537164 ZNF589Q86UQ0 364 aaPredicted RBP20.47■□□□□ 0.87
SFSWAP-205ENST00000537164 STK11IPQ8N1F8 1099 aa20.47■□□□□ 0.87
SFSWAP-205ENST00000537164 GOPCQ9HD26 462 aa20.47■□□□□ 0.87
SFSWAP-205ENST00000537164 BTBD7Q9P203 1132 aa20.47■□□□□ 0.87
SFSWAP-205ENST00000537164 CCDC171Q6TFL3 1326 aa20.47■□□□□ 0.87
SFSWAP-205ENST00000537164 PRDM1O75626 825 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 FGAP02671 866 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 HSPD1P10809 573 aaKnown RBP20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 DSG3P32926 999 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 UBXN2AP68543 259 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 MTFR1Q15390 333 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 SPICE1Q8N0Z3 855 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 MB21D1Q8N884 522 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 NEDD1Q8NHV4 660 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 SOCS4Q8WXH5 440 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 USP6NLQ92738 828 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 TANGO6Q9C0B7 1094 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 MTMR4Q9NYA4 1195 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 ADAMTS5Q9UNA0 930 aa20.46■□□□□ 0.87
SFSWAP-205ENST00000537164 HIP1O00291 1037 aa20.45■□□□□ 0.86
SFSWAP-205ENST00000537164 XRCC5P13010 732 aaKnown RBP20.45■□□□□ 0.86
SFSWAP-205ENST00000537164 MFAP1P55081 439 aaKnown RBP20.45■□□□□ 0.86
SFSWAP-205ENST00000537164 GPR142Q7Z601 462 aa20.45■□□□□ 0.86
SFSWAP-205ENST00000537164 COL11A1P12107 1806 aaPredicted RBP20.45■□□□□ 0.86
SFSWAP-205ENST00000537164 ELNP15502 786 aa20.44■□□□□ 0.86
SFSWAP-205ENST00000537164 EN2P19622 333 aaPredicted RBP20.44■□□□□ 0.86
SFSWAP-205ENST00000537164 ATP2B2Q01814 1243 aa20.44■□□□□ 0.86
SFSWAP-205ENST00000537164 MORN1Q5T089 497 aa20.44■□□□□ 0.86
SFSWAP-205ENST00000537164 PLEKHH3Q7Z736 793 aa20.44■□□□□ 0.86
SFSWAP-205ENST00000537164 CEP95Q96GE4 821 aa20.44■□□□□ 0.86
SFSWAP-205ENST00000537164 NUDT12Q9BQG2 462 aa20.44■□□□□ 0.86
SFSWAP-205ENST00000537164 ZNF236Q9UL36 1845 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 ORC4O43929 436 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 FLOT1O75955 427 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 TTLL1O95922 423 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 TSPY3P0CV98 308 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 TSPY8P0CW00 308 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 CCL5P13501 91 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 CTDSPL2Q05D32 466 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 TTC22Q5TAA0 569 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 TACC3Q9Y6A5 838 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 LAMA4Q16363 1823 aa20.43■□□□□ 0.86
SFSWAP-205ENST00000537164 F5H6K3 240 aa20.42■□□□□ 0.86
SFSWAP-205ENST00000537164 INHAP05111 366 aa20.42■□□□□ 0.86
SFSWAP-205ENST00000537164 GJB1P08034 283 aa20.42■□□□□ 0.86
SFSWAP-205ENST00000537164 GSPT1P15170 499 aaKnown RBP20.42■□□□□ 0.86
SFSWAP-205ENST00000537164 TFAP4Q01664 338 aa20.42■□□□□ 0.86
SFSWAP-205ENST00000537164 KLRC3Q07444 240 aa20.42■□□□□ 0.86
SFSWAP-205ENST00000537164 CCAR1Q8IX12 1150 aaKnown RBP20.42■□□□□ 0.86
SFSWAP-205ENST00000537164 SHCBP1Q8NEM2 672 aa20.42■□□□□ 0.86
SFSWAP-205ENST00000537164 BIN2Q9UBW5 565 aaPredicted RBP20.42■□□□□ 0.86
SFSWAP-205ENST00000537164 CLIP2Q9UDT6 1046 aa20.42■□□□□ 0.86
SFSWAP-205ENST00000537164 HMGCRP04035 888 aa20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 CAPN2P17655 700 aa20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 GJA8P48165 433 aa20.41■□□□□ 0.86
SFSWAP-205ENST00000537164 NOVP48745 357 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms