RNA–Protein interactions for RNA: ENST00000534692.1

CKLF-207, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-207ENST00000534692 MCOLN1Q9GZU1 580 aa27.15■■□□□ 1.94
CKLF-207ENST00000534692 MTMR4Q9NYA4 1195 aa27.15■■□□□ 1.94
CKLF-207ENST00000534692 CTNNA3Q9UI47 895 aa27.15■■□□□ 1.94
CKLF-207ENST00000534692 DOCK3Q8IZD9 2030 aa27.14■■□□□ 1.94
CKLF-207ENST00000534692 ATP2B2Q01814 1243 aa27.14■■□□□ 1.94
CKLF-207ENST00000534692 PKN2Q16513 984 aaKnown RBP27.14■■□□□ 1.94
CKLF-207ENST00000534692 FAM110CQ1W6H9 321 aa27.14■■□□□ 1.94
CKLF-207ENST00000534692 OTOP1Q7RTM1 612 aa27.14■■□□□ 1.94
CKLF-207ENST00000534692 RPAP3Q9H6T3 665 aaPredicted RBP27.14■■□□□ 1.94
CKLF-207ENST00000534692 SYNPO2Q9UMS6 1093 aa27.14■■□□□ 1.94
CKLF-207ENST00000534692 ZNF213O14771 459 aa27.13■■□□□ 1.93
CKLF-207ENST00000534692 HERVK_113P62684 666 aa27.13■■□□□ 1.93
CKLF-207ENST00000534692 ARHGEF6Q15052 776 aa27.13■■□□□ 1.93
CKLF-207ENST00000534692 MKL1Q969V6 931 aa27.13■■□□□ 1.93
CKLF-207ENST00000534692 RNF41Q9H4P4 317 aaPredicted RBP27.13■■□□□ 1.93
CKLF-207ENST00000534692 EFCC1Q9HA90 598 aa27.13■■□□□ 1.93
CKLF-207ENST00000534692 GOPCQ9HD26 462 aa27.13■■□□□ 1.93
CKLF-207ENST00000534692 TSPY2A6NKD2 308 aa27.12■■□□□ 1.93
CKLF-207ENST00000534692 RANBP6O60518 1105 aaKnown RBP27.12■■□□□ 1.93
CKLF-207ENST00000534692 TTLL1O95922 423 aa27.12■■□□□ 1.93
CKLF-207ENST00000534692 KIF22Q14807 665 aa27.12■■□□□ 1.93
CKLF-207ENST00000534692 IMMTQ16891 758 aaKnown RBP27.12■■□□□ 1.93
CKLF-207ENST00000534692 MFSD6Q6ZSS7 791 aa27.12■■□□□ 1.93
CKLF-207ENST00000534692 ANKRD13CQ8N6S4 541 aa27.12■■□□□ 1.93
CKLF-207ENST00000534692 GTF3C2Q8WUA4 911 aaPredicted RBP27.12■■□□□ 1.93
CKLF-207ENST00000534692 TRIM17Q9Y577 477 aa27.12■■□□□ 1.93
CKLF-207ENST00000534692 A0A0G2JMZ2 1700 aa27.12■■□□□ 1.93
CKLF-207ENST00000534692 NT5C2P49902 561 aa27.11■■□□□ 1.93
CKLF-207ENST00000534692 PTH1RQ03431 593 aa27.11■■□□□ 1.93
CKLF-207ENST00000534692 PPP4R3BQ5MIZ7 849 aa27.11■■□□□ 1.93
CKLF-207ENST00000534692 ESYT1Q9BSJ8 1104 aa27.11■■□□□ 1.93
CKLF-207ENST00000534692 ARHGAP39Q9C0H5 1083 aa27.11■■□□□ 1.93
CKLF-207ENST00000534692 MORF4L1Q9UBU8 362 aa27.11■■□□□ 1.93
CKLF-207ENST00000534692 WDR46O15213 610 aaKnown RBP27.1■■□□□ 1.93
CKLF-207ENST00000534692 GNRH1P01148 92 aa27.1■■□□□ 1.93
CKLF-207ENST00000534692 CTGFP29279 349 aa27.1■■□□□ 1.93
CKLF-207ENST00000534692 LBX2Q6XYB7 198 aa27.1■■□□□ 1.93
CKLF-207ENST00000534692 SPICE1Q8N0Z3 855 aa27.1■■□□□ 1.93
CKLF-207ENST00000534692 IL17RBQ9NRM6 502 aa27.1■■□□□ 1.93
CKLF-207ENST00000534692 TOMM22Q9NS69 142 aa27.1■■□□□ 1.93
CKLF-207ENST00000534692 CLIP2Q9UDT6 1046 aa27.1■■□□□ 1.93
CKLF-207ENST00000534692 NOVP48745 357 aa27.09■■□□□ 1.93
CKLF-207ENST00000534692 RRP12Q5JTH9 1297 aaKnown RBP27.09■■□□□ 1.93
CKLF-207ENST00000534692 POTEEQ6S8J3 1075 aa27.09■■□□□ 1.93
CKLF-207ENST00000534692 TRIM47Q96LD4 638 aa27.09■■□□□ 1.93
CKLF-207ENST00000534692 NEDD4P46934 1319 aa27.09■■□□□ 1.93
CKLF-207ENST00000534692 PSMC4P43686 418 aa27.08■■□□□ 1.93
CKLF-207ENST00000534692 FBXO46Q6PJ61 603 aaPredicted RBP27.08■■□□□ 1.93
CKLF-207ENST00000534692 MAP4K1Q92918 833 aa27.08■■□□□ 1.93
CKLF-207ENST00000534692 TANGO6Q9C0B7 1094 aa27.08■■□□□ 1.93
CKLF-207ENST00000534692 TCP11L1Q9NUJ3 509 aa27.08■■□□□ 1.93
CKLF-207ENST00000534692 U3KPZ7 1027 aaPredicted RBP27.08■■□□□ 1.93
CKLF-207ENST00000534692 SPDYE16A6NNV3 312 aaPredicted RBP27.07■■□□□ 1.92
CKLF-207ENST00000534692 F5H6K3 240 aa27.07■■□□□ 1.92
CKLF-207ENST00000534692 CDC45O75419 566 aa27.07■■□□□ 1.92
CKLF-207ENST00000534692 KLRC3Q07444 240 aa27.07■■□□□ 1.92
CKLF-207ENST00000534692 TXNRD2Q9NNW7 524 aa27.07■■□□□ 1.92
CKLF-207ENST00000534692 RBPJLQ9UBG7 517 aa27.07■■□□□ 1.92
CKLF-207ENST00000534692 HTTP42858 3142 aa27.07■■□□□ 1.92
CKLF-207ENST00000534692 COL11A1P12107 1806 aaPredicted RBP27.06■■□□□ 1.92
CKLF-207ENST00000534692 NMT2O60551 498 aa27.06■■□□□ 1.92
CKLF-207ENST00000534692 NDUFB10O96000 172 aa27.06■■□□□ 1.92
CKLF-207ENST00000534692 FCGRTP55899 365 aa27.06■■□□□ 1.92
CKLF-207ENST00000534692 COG2Q14746 738 aa27.06■■□□□ 1.92
CKLF-207ENST00000534692 GMCL1P1Q8NEA9 526 aa27.06■■□□□ 1.92
CKLF-207ENST00000534692 NKX2-3Q8TAU0 364 aa27.06■■□□□ 1.92
CKLF-207ENST00000534692 ESR2Q92731 530 aa27.06■■□□□ 1.92
CKLF-207ENST00000534692 ABHD8Q96I13 439 aa27.06■■□□□ 1.92
CKLF-207ENST00000534692 PTPN22Q9Y2R2 807 aa27.06■■□□□ 1.92
CKLF-207ENST00000534692 MYPNQ86TC9 1320 aa27.06■■□□□ 1.92
CKLF-207ENST00000534692 KIAA1211Q6ZU35 1233 aa27.05■■□□□ 1.92
CKLF-207ENST00000534692 LRRC47Q8N1G4 583 aaKnown RBP27.05■■□□□ 1.92
CKLF-207ENST00000534692 GPRC5AQ8NFJ5 357 aa27.05■■□□□ 1.92
CKLF-207ENST00000534692 LSG1Q9H089 658 aaKnown RBP27.05■■□□□ 1.92
CKLF-207ENST00000534692 HOXC10Q9NYD6 342 aa27.05■■□□□ 1.92
CKLF-207ENST00000534692 RABGAP1Q9Y3P9 1069 aa27.05■■□□□ 1.92
CKLF-207ENST00000534692 ERVK-9P63128 1117 aa27.04■■□□□ 1.92
CKLF-207ENST00000534692 ERVK-24P63145 666 aa27.04■■□□□ 1.92
CKLF-207ENST00000534692 STX8Q9UNK0 236 aa27.04■■□□□ 1.92
CKLF-207ENST00000534692 CNMDO75829 334 aa27.03■■□□□ 1.92
CKLF-207ENST00000534692 FLOT1O75955 427 aa27.03■■□□□ 1.92
CKLF-207ENST00000534692 FMNL1O95466 1100 aaPredicted RBP27.03■■□□□ 1.92
CKLF-207ENST00000534692 CYP21A2P08686 494 aa27.03■■□□□ 1.92
CKLF-207ENST00000534692 DSG3P32926 999 aa27.03■■□□□ 1.92
CKLF-207ENST00000534692 PRMT2P55345 433 aa27.03■■□□□ 1.92
CKLF-207ENST00000534692 FAM83BQ5T0W9 1011 aa27.03■■□□□ 1.92
CKLF-207ENST00000534692 CASC1Q6TDU7 716 aa27.03■■□□□ 1.92
CKLF-207ENST00000534692 PAGR1Q9BTK6 254 aa27.03■■□□□ 1.92
CKLF-207ENST00000534692 CNNM2Q9H8M5 875 aa27.03■■□□□ 1.92
CKLF-207ENST00000534692 SRRDQ9UH36 339 aa27.03■■□□□ 1.92
CKLF-207ENST00000534692 RAD21O60216 631 aa27.02■■□□□ 1.92
CKLF-207ENST00000534692 PEX10O60683 326 aa27.02■■□□□ 1.92
CKLF-207ENST00000534692 HOXD10P28358 340 aa27.02■■□□□ 1.92
CKLF-207ENST00000534692 KRT23Q9C075 422 aa27.02■■□□□ 1.92
CKLF-207ENST00000534692 HPS5Q9UPZ3 1129 aa27.02■■□□□ 1.92
CKLF-207ENST00000534692 RBM8AQ9Y5S9 174 aaKnown RBP27.02■■□□□ 1.92
CKLF-207ENST00000534692 PLXNB2O15031 1838 aa27.02■■□□□ 1.92
CKLF-207ENST00000534692 B4E1Z4 1266 aa27.01■■□□□ 1.91
CKLF-207ENST00000534692 KDM4AO75164 1064 aa27.01■■□□□ 1.91
CKLF-207ENST00000534692 ECM2O94769 699 aaPredicted RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms