RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 MT-CO1P00395 513 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 RBP3P10745 1247 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 NAT2P11245 290 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 BPIP17213 487 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 PTGIRP43119 386 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 IREB2P48200 963 aaKnown RBP5.54□□□□□ -1.52
C11orf54-213ENST00000533585 SCNN1BP51168 640 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 ZNF157P51786 506 aaPredicted RBP5.54□□□□□ -1.52
C11orf54-213ENST00000533585 GTF2A2P52657 109 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 SKOR1P84550 965 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 RPL6Q02878 288 aaKnown RBP5.54□□□□□ -1.52
C11orf54-213ENST00000533585 TRIM32Q13049 653 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 TBX2Q13207 712 aaPredicted RBP5.54□□□□□ -1.52
C11orf54-213ENST00000533585 GALEQ14376 348 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 ZNF460Q14592 562 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 SART3Q15020 963 aaKnown RBP5.54□□□□□ -1.52
C11orf54-213ENST00000533585 ALDH1L2Q3SY69 923 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 GNPTABQ3T906 1256 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 CFAP100Q494V2 611 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 RPS26P11Q5JNZ5 115 aaPredicted RBP5.54□□□□□ -1.52
C11orf54-213ENST00000533585 VARS2Q5ST30 1063 aaKnown RBP5.54□□□□□ -1.52
C11orf54-213ENST00000533585 TMEM240Q5SV17 173 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 RASIP1Q5U651 963 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 CFAP161Q6P656 301 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 UBE2R2Q712K3 238 aaPredicted RBP5.54□□□□□ -1.52
C11orf54-213ENST00000533585 BRAPQ7Z569 592 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 KRT77Q7Z794 578 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 PNMA8AQ86V59 439 aaPredicted RBP5.54□□□□□ -1.52
C11orf54-213ENST00000533585 TTC30BQ8N4P2 665 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 NKAPQ8N5F7 415 aaKnown RBP5.54□□□□□ -1.52
C11orf54-213ENST00000533585 TRIM63Q969Q1 353 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 TBATAQ96M53 351 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 SLC13A1Q9BZW2 595 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 LRRC27Q9C0I9 530 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 LRP2BPQ9P2M1 347 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 PGAP2Q9UHJ9 254 aa5.54□□□□□ -1.52
C11orf54-213ENST00000533585 BICDL2A1A5D9 508 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 hCG_1984214I3L0E3 225 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 PRODHO43272 600 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 SNX2O60749 519 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 MAP3K6O95382 1288 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 LTFP02788 710 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 ASGR2P07307 311 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 VCAM1P19320 739 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 BMP6P22004 513 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 GRNP28799 593 aaKnown RBP5.53□□□□□ -1.52
C11orf54-213ENST00000533585 IGFALSP35858 605 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 IARSP41252 1262 aaKnown RBP5.53□□□□□ -1.52
C11orf54-213ENST00000533585 FAAP100Q0VG06 881 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 PDCD2Q16342 344 aaPredicted RBP5.53□□□□□ -1.52
C11orf54-213ENST00000533585 C4orf17Q53FE4 359 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 TRIM61Q5EBN2 209 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 DACT2Q5SW24 774 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 LLGL2Q6P1M3 1020 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 NSMFQ6X4W1 530 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 RSRC2Q7L4I2 434 aaKnown RBP5.53□□□□□ -1.52
C11orf54-213ENST00000533585 RASSF3Q86WH2 238 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 NCAPG2Q86XI2 1143 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 TRIM22Q8IYM9 498 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 KDF1Q8NAX2 398 aaPredicted RBP5.53□□□□□ -1.52
C11orf54-213ENST00000533585 SLC7A14Q8TBB6 771 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 KLHL6Q8WZ60 621 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 CCT6BQ92526 530 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 AIFM3Q96NN9 605 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.53□□□□□ -1.52
C11orf54-213ENST00000533585 EFCC1Q9HA90 598 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 CBX8Q9HC52 389 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 C11orf16Q9NQ32 467 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 CRTAC1Q9NQ79 661 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 C1orf112Q9NSG2 853 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 SAGE1Q9NXZ1 904 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 TLL2Q9Y6L7 1015 aa5.53□□□□□ -1.52
C11orf54-213ENST00000533585 A0A096LPE4 126 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 A0A1W2PPZ6 126 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 FAM86C2PA6NEL3 165 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 METTL12A8MUP2 240 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 M0R2C6 588 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 EFCAB14O75071 495 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 IL33O95760 270 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 ACRP10323 421 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 ZKSCAN1P17029 563 aaPredicted RBP5.52□□□□□ -1.53
C11orf54-213ENST00000533585 HSPA6P17066 643 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 NME2P22392 152 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 ECE1P42892 770 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 EIF5P55010 431 aaKnown RBP5.52□□□□□ -1.53
C11orf54-213ENST00000533585 NUCB1Q02818 461 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 TRIM14Q14142 442 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 PCBP2Q15366 365 aaKnown RBP eCLIP5.52□□□□□ -1.53
C11orf54-213ENST00000533585 RGL3Q3MIN7 710 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 FAM133BQ5BKY9 247 aaKnown RBP5.52□□□□□ -1.53
C11orf54-213ENST00000533585 SLC27A3Q5K4L6 730 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 C1QTNF12Q5T7M4 302 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 INTS3Q68E01 1043 aaKnown RBP5.52□□□□□ -1.53
C11orf54-213ENST00000533585 CDCA2Q69YH5 1023 aaPredicted RBP5.52□□□□□ -1.53
C11orf54-213ENST00000533585 HEATR6Q6AI08 1181 aaKnown RBP5.52□□□□□ -1.53
C11orf54-213ENST00000533585 PDXDC1Q6P996 788 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 FGD2Q7Z6J4 655 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 CATIPQ7Z7H3 387 aa5.52□□□□□ -1.53
C11orf54-213ENST00000533585 CBARPQ8N350 705 aaPredicted RBP5.52□□□□□ -1.53
C11orf54-213ENST00000533585 SPATA5Q8NB90 893 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms