RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 TNFRSF10AO00220 468 aa15.16■□□□□ 0.02
CAPN1-223ENST00000533079 CLTBP09497 229 aa15.16■□□□□ 0.02
CAPN1-223ENST00000533079 LRRC41Q15345 812 aa15.16■□□□□ 0.02
CAPN1-223ENST00000533079 MOV10L1Q9BXT6 1211 aaKnown RBP15.16■□□□□ 0.02
CAPN1-223ENST00000533079 MROH8Q9H579 483 aa15.16■□□□□ 0.02
CAPN1-223ENST00000533079 SNRKQ9NRH2 765 aa15.16■□□□□ 0.02
CAPN1-223ENST00000533079 PHF24Q9UPV7 400 aa15.16■□□□□ 0.02
CAPN1-223ENST00000533079 PNMA6EA0A0J9YXQ4 647 aa15.15■□□□□ 0.02
CAPN1-223ENST00000533079 TRIM43BA6NCK2 446 aa15.15■□□□□ 0.02
CAPN1-223ENST00000533079 CYP7A1P22680 504 aa15.15■□□□□ 0.02
CAPN1-223ENST00000533079 ADCYAP1R1P41586 468 aa15.15■□□□□ 0.02
CAPN1-223ENST00000533079 DYNLL1P63167 89 aaKnown RBP15.15■□□□□ 0.02
CAPN1-223ENST00000533079 COG2Q14746 738 aa15.15■□□□□ 0.02
CAPN1-223ENST00000533079 TRIM43Q96BQ3 446 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-223ENST00000533079 MYO5AQ9Y4I1 1855 aaKnown RBP15.14■□□□□ 0.01
CAPN1-223ENST00000533079 KIAA0355O15063 1070 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 ERCC3P19447 782 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 ZAP70P43403 619 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 FPGSQ05932 587 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 FAM47AQ5JRC9 791 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 SH3RF1Q7Z6J0 888 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 RNF180Q86T96 592 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 ACER1Q8TDN7 264 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 MAML3Q96JK9 1138 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 DBNDD2Q9BQY9 259 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 XPNPEP3Q9NQH7 507 aa15.14■□□□□ 0.01
CAPN1-223ENST00000533079 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-223ENST00000533079 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-223ENST00000533079 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-223ENST00000533079 RARBP10826 455 aa15.13■□□□□ 0.01
CAPN1-223ENST00000533079 RAG1P15918 1043 aa15.13■□□□□ 0.01
CAPN1-223ENST00000533079 DNAJB2P25686 324 aa15.13■□□□□ 0.01
CAPN1-223ENST00000533079 SHMT1P34896 483 aa15.13■□□□□ 0.01
CAPN1-223ENST00000533079 RARSP54136 660 aaKnown RBP15.13■□□□□ 0.01
CAPN1-223ENST00000533079 TLE2Q04725 743 aa15.13■□□□□ 0.01
CAPN1-223ENST00000533079 ANO1Q5XXA6 986 aa15.13■□□□□ 0.01
CAPN1-223ENST00000533079 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
CAPN1-223ENST00000533079 TANGO6Q9C0B7 1094 aa15.13■□□□□ 0.01
CAPN1-223ENST00000533079 PIH1D3Q9NQM4 214 aaKnown RBP15.13■□□□□ 0.01
CAPN1-223ENST00000533079 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
CAPN1-223ENST00000533079 COBLO75128 1261 aa15.12■□□□□ 0.01
CAPN1-223ENST00000533079 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
CAPN1-223ENST00000533079 COL9A1P20849 921 aa15.12■□□□□ 0.01
CAPN1-223ENST00000533079 MIGA1Q8NAN2 632 aa15.12■□□□□ 0.01
CAPN1-223ENST00000533079 ATXN2LQ8WWM7 1075 aaKnown RBP15.12■□□□□ 0.01
CAPN1-223ENST00000533079 FERMT2Q96AC1 680 aa15.12■□□□□ 0.01
CAPN1-223ENST00000533079 YTHDC1Q96MU7 727 aaKnown RBP15.12■□□□□ 0.01
CAPN1-223ENST00000533079 SH2D4AQ9H788 454 aa15.12■□□□□ 0.01
CAPN1-223ENST00000533079 PARP14Q460N5 1801 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 A0A1W2PQ45 241 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-223ENST00000533079 A0A1W2PQY0 241 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 SLC25A27O95847 323 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 FCER1AP12319 257 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 GUCY1A2P33402 732 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 GABPAQ06546 454 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 MAP3K12Q12852 859 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 OS9Q13438 667 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-223ENST00000533079 POLA2Q14181 598 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 CCDC174Q6PII3 467 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 ANKRD33Q7Z3H0 272 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 NCAPG2Q86XI2 1143 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 TOX2Q96NM4 488 aa15.11■□□□□ 0.01
CAPN1-223ENST00000533079 AKR1A1P14550 325 aa15.1■□□□□ 0.01
CAPN1-223ENST00000533079 ITGB8P26012 769 aa15.1■□□□□ 0.01
CAPN1-223ENST00000533079 DSG3P32926 999 aa15.1■□□□□ 0.01
CAPN1-223ENST00000533079 GRIN2CQ14957 1233 aa15.1■□□□□ 0.01
CAPN1-223ENST00000533079 SEPT2Q15019 361 aa15.1■□□□□ 0.01
CAPN1-223ENST00000533079 TMEM179Q6ZVK1 233 aa15.1■□□□□ 0.01
CAPN1-223ENST00000533079 MAGEB6Q8N7X4 407 aa15.1■□□□□ 0.01
CAPN1-223ENST00000533079 GAS2L1Q99501 681 aaPredicted RBP15.1■□□□□ 0.01
CAPN1-223ENST00000533079 TSEN34Q9BSV6 310 aaKnown RBP15.1■□□□□ 0.01
CAPN1-223ENST00000533079 ZNF576Q9H609 170 aa15.1■□□□□ 0.01
CAPN1-223ENST00000533079 DBNLQ9UJU6 430 aaKnown RBP15.1■□□□□ 0.01
CAPN1-223ENST00000533079 DIS3Q9Y2L1 958 aaKnown RBP15.1■□□□□ 0.01
CAPN1-223ENST00000533079 MROH7Q68CQ1 1323 aa15.1■□□□□ 0.01
CAPN1-223ENST00000533079 A0A1W2PRG0 241 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 MOXD2PA6NHM9 499 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 DCDC2CA8MYV0 355 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 PQBP1O60828 265 aaKnown RBP15.09■□□□□ 0.01
CAPN1-223ENST00000533079 FLOT1O75955 427 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 TRIM27P14373 513 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 COPB2P35606 906 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 PLCD1P51178 756 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 EPHB4P54760 987 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 PLS1Q14651 629 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 AKNAD1Q5T1N1 836 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 USP38Q8NB14 1042 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 SSH3Q8TE77 659 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 NUP133Q8WUM0 1156 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 TIFAQ96CG3 184 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
CAPN1-223ENST00000533079 ARHGEF10LQ9HCE6 1279 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 TMEM39AQ9NV64 488 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 THEGQ9P2T0 379 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 SWAP70Q9UH65 585 aa15.09■□□□□ 0.01
CAPN1-223ENST00000533079 MPHOSPH10O00566 681 aaKnown RBP15.08■□□□□ 0
CAPN1-223ENST00000533079 WDR46O15213 610 aaKnown RBP15.08■□□□□ 0
CAPN1-223ENST00000533079 POLR3DP05423 398 aaPredicted RBP15.08■□□□□ 0
CAPN1-223ENST00000533079 PRAMEF19Q5SWL8 479 aa15.08■□□□□ 0
CAPN1-223ENST00000533079 MSL3Q8N5Y2 521 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms