RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
COLCA2-202ENST00000526216 NMRK2Q9NPI5 230 aa16.81■□□□□ 0.28
COLCA2-202ENST00000526216 OTOFQ9HC10 1997 aa16.81■□□□□ 0.28
COLCA2-202ENST00000526216 UBE2Q2LH0YL09 131 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 RAB3GAP1Q15042 981 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 DCAF15Q66K64 600 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 TMTC3Q6ZXV5 915 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 NBPF11Q86T75 865 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 STAG2Q8N3U4 1231 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 ACER1Q8TDN7 264 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 DDX11Q96FC9 970 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 CWC22Q9HCG8 908 aaKnown RBP16.8■□□□□ 0.28
COLCA2-202ENST00000526216 CABP5Q9NP86 173 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 MAD2L2Q9UI95 211 aa16.8■□□□□ 0.28
COLCA2-202ENST00000526216 USP17L5A8MUK1 530 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 USP2O75604 605 aaPredicted RBP16.79■□□□□ 0.28
COLCA2-202ENST00000526216 CALM1P0DP23 149 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 CALM2P0DP24 149 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 CALM3P0DP25 149 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 SNHG28P0DPA3 235 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 VEGFAP15692 232 aaPredicted RBP16.79■□□□□ 0.28
COLCA2-202ENST00000526216 IFNAR1P17181 557 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 ATP2B2Q01814 1243 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 SRBD1Q8N5C6 995 aaKnown RBP16.79■□□□□ 0.28
COLCA2-202ENST00000526216 PHKBQ93100 1093 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 KLRG1Q96E93 195 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 ZDHHC9Q9Y397 364 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 CNTNAP5Q8WYK1 1306 aa16.79■□□□□ 0.28
COLCA2-202ENST00000526216 PALM3A6NDB9 673 aaPredicted RBP16.78■□□□□ 0.28
COLCA2-202ENST00000526216 PDHBP11177 359 aa16.78■□□□□ 0.28
COLCA2-202ENST00000526216 ECE1P42892 770 aa16.78■□□□□ 0.28
COLCA2-202ENST00000526216 FMR1Q06787 632 aaKnown RBP eCLIP16.78■□□□□ 0.28
COLCA2-202ENST00000526216 PRKG1Q13976 671 aa16.78■□□□□ 0.28
COLCA2-202ENST00000526216 SUPT20HL1Q3ZLR7 823 aa16.78■□□□□ 0.28
COLCA2-202ENST00000526216 KIAA1755Q5JYT7 1200 aa16.78■□□□□ 0.28
COLCA2-202ENST00000526216 MAP1SQ66K74 1059 aaPredicted RBP16.78■□□□□ 0.28
COLCA2-202ENST00000526216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.78■□□□□ 0.28
COLCA2-202ENST00000526216 ZNF526Q8TF50 670 aaPredicted RBP16.78■□□□□ 0.28
COLCA2-202ENST00000526216 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
COLCA2-202ENST00000526216 CHMP5Q9NZZ3 219 aa16.78■□□□□ 0.28
COLCA2-202ENST00000526216 CIZ1Q9ULV3 898 aaPredicted RBP16.78■□□□□ 0.28
COLCA2-202ENST00000526216 PHIPQ8WWQ0 1821 aa16.78■□□□□ 0.28
COLCA2-202ENST00000526216 CTNND1O60716 968 aaKnown RBP16.77■□□□□ 0.28
COLCA2-202ENST00000526216 GOLGA8HP0CJ92 632 aa16.77■□□□□ 0.28
COLCA2-202ENST00000526216 USP17L2Q6R6M4 530 aa16.77■□□□□ 0.28
COLCA2-202ENST00000526216 CTCFLQ8NI51 663 aaPredicted RBP16.77■□□□□ 0.28
COLCA2-202ENST00000526216 ZKSCAN4Q969J2 545 aaPredicted RBP16.77■□□□□ 0.28
COLCA2-202ENST00000526216 WRNIP1Q96S55 665 aa16.77■□□□□ 0.28
COLCA2-202ENST00000526216 RBM28Q9NW13 759 aaKnown RBP16.77■□□□□ 0.28
COLCA2-202ENST00000526216 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
COLCA2-202ENST00000526216 TRAF5O00463 557 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 CPLX1O14810 134 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 DHX16O60231 1041 aaKnown RBP16.76■□□□□ 0.27
COLCA2-202ENST00000526216 FMNL1O95466 1100 aaPredicted RBP16.76■□□□□ 0.27
COLCA2-202ENST00000526216 ASNSP08243 561 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 SYT1P21579 422 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 HMGN5P82970 282 aaKnown RBP16.76■□□□□ 0.27
COLCA2-202ENST00000526216 PPP2R5BQ15173 497 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 NOL9Q5SY16 702 aaKnown RBP16.76■□□□□ 0.27
COLCA2-202ENST00000526216 CDC37L1Q7L3B6 337 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 SCYL3Q8IZE3 742 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 CCDC82Q8N4S0 544 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 SP7Q8TDD2 431 aaPredicted RBP16.76■□□□□ 0.27
COLCA2-202ENST00000526216 AIFM3Q96NN9 605 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 CPVLQ9H3G5 476 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 GINM1Q9NU53 330 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 ORC3Q9UBD5 711 aaPredicted RBP16.76■□□□□ 0.27
COLCA2-202ENST00000526216 FRMPD2Q68DX3 1309 aaPredicted RBP16.76■□□□□ 0.27
COLCA2-202ENST00000526216 STK36Q9NRP7 1315 aa16.76■□□□□ 0.27
COLCA2-202ENST00000526216 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.75■□□□□ 0.27
COLCA2-202ENST00000526216 MOB2Q70IA6 237 aa16.75■□□□□ 0.27
COLCA2-202ENST00000526216 GMCL1P1Q8NEA9 526 aa16.75■□□□□ 0.27
COLCA2-202ENST00000526216 SHISA4Q96DD7 197 aa16.75■□□□□ 0.27
COLCA2-202ENST00000526216 SLC26A6Q9BXS9 759 aa16.75■□□□□ 0.27
COLCA2-202ENST00000526216 TMX2Q9Y320 296 aa16.75■□□□□ 0.27
COLCA2-202ENST00000526216 CCDC196A0A1B0GTZ2 297 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 hCG_1642624A0A1W2PR95 340 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 CYTH3O43739 400 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 CDKL5O76039 1030 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 BRD1O95696 1058 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 NDUFB10O96000 172 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 PARP1P09874 1014 aaKnown RBP16.74■□□□□ 0.27
COLCA2-202ENST00000526216 KIF5BP33176 963 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 FOSBP53539 338 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 ZNF543Q08ER8 600 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 PKN1Q16512 942 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 SLFN13Q68D06 897 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 LDHDQ86WU2 507 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 ARHGEF10LQ9HCE6 1279 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 GJB4Q9NTQ9 266 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 MTMR6Q9Y217 621 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 SNCAIPQ9Y6H5 919 aa16.74■□□□□ 0.27
COLCA2-202ENST00000526216 F5H6K3 240 aa16.73■□□□□ 0.27
COLCA2-202ENST00000526216 PTPRAP18433 802 aa16.73■□□□□ 0.27
COLCA2-202ENST00000526216 KLRC3Q07444 240 aa16.73■□□□□ 0.27
COLCA2-202ENST00000526216 SSRP1Q08945 709 aaKnown RBP16.73■□□□□ 0.27
COLCA2-202ENST00000526216 TTBK2Q6IQ55 1244 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms