RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 EPB41L4AQ9HCS5 686 aaPredicted RBP11.35□□□□□ -0.59
SF3B2-204ENST00000525207 RABGAP1Q9Y3P9 1069 aa11.35□□□□□ -0.59
SF3B2-204ENST00000525207 ERC2O15083 957 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 GPAA1O43292 621 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 SGPL1O95470 568 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 ZFYP08048 801 aaPredicted RBP11.34□□□□□ -0.59
SF3B2-204ENST00000525207 XRCC5P13010 732 aaKnown RBP11.34□□□□□ -0.59
SF3B2-204ENST00000525207 MX1P20591 662 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 CDK8P49336 464 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 CCNA1P78396 465 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 Q3C1V9 767 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 KIAA1755Q5JYT7 1200 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 LPAR1Q92633 364 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 USP6NLQ92738 828 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 GCC1Q96CN9 775 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 CCDC17Q96LX7 622 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 DEFB118Q96PH6 123 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 APBA2Q99767 749 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 SH2D4AQ9H788 454 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 ARHGEF10LQ9HCE6 1279 aa11.34□□□□□ -0.59
SF3B2-204ENST00000525207 GSG1L2A8MUP6 293 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 M0R2C6 588 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 RNF113AO15541 343 aaKnown RBP11.33□□□□□ -0.6
SF3B2-204ENST00000525207 GLRX3O76003 335 aaKnown RBP11.33□□□□□ -0.6
SF3B2-204ENST00000525207 ZKSCAN1P17029 563 aaPredicted RBP11.33□□□□□ -0.6
SF3B2-204ENST00000525207 CAPN2P17655 700 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 CYP2B6P20813 491 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 RGS2P41220 211 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 TRIM32Q13049 653 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 SBK1Q52WX2 424 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 MORN1Q5T089 497 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 MAP3K21Q5TCX8 1036 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 GIMAP6Q6P9H5 292 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 PLEKHH3Q7Z736 793 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 CCAR1Q8IX12 1150 aaKnown RBP11.33□□□□□ -0.6
SF3B2-204ENST00000525207 TANGO6Q9C0B7 1094 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 VCPKMTQ9H867 229 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 BTBD7Q9P203 1132 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 TMX2Q9Y320 296 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 RPTORQ8N122 1335 aa11.33□□□□□ -0.6
SF3B2-204ENST00000525207 PLIN4Q96Q06 1357 aa11.32□□□□□ -0.6
SF3B2-204ENST00000525207 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
SF3B2-204ENST00000525207 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
SF3B2-204ENST00000525207 GNAT2P19087 354 aa11.32□□□□□ -0.6
SF3B2-204ENST00000525207 GRB14Q14449 540 aa11.32□□□□□ -0.6
SF3B2-204ENST00000525207 LRRFIP1Q32MZ4 808 aaKnown RBP11.32□□□□□ -0.6
SF3B2-204ENST00000525207 SIAH1Q8IUQ4 282 aa11.32□□□□□ -0.6
SF3B2-204ENST00000525207 TRMT44Q8IYL2 757 aaKnown RBP11.32□□□□□ -0.6
SF3B2-204ENST00000525207 YTHDC1Q96MU7 727 aaKnown RBP11.32□□□□□ -0.6
SF3B2-204ENST00000525207 HTATIP2Q9BUP3 242 aa11.32□□□□□ -0.6
SF3B2-204ENST00000525207 HMX1Q9NP08 348 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-204ENST00000525207 TRIOBPQ9H2D6 2365 aa11.31□□□□□ -0.6
SF3B2-204ENST00000525207 RASA1P20936 1047 aa11.31□□□□□ -0.6
SF3B2-204ENST00000525207 MAP2K5Q13163 448 aa11.31□□□□□ -0.6
SF3B2-204ENST00000525207 HDAC1Q13547 482 aaPredicted RBP11.31□□□□□ -0.6
SF3B2-204ENST00000525207 COG2Q14746 738 aa11.31□□□□□ -0.6
SF3B2-204ENST00000525207 CCL14Q16627 93 aa11.31□□□□□ -0.6
SF3B2-204ENST00000525207 SPICE1Q8N0Z3 855 aa11.31□□□□□ -0.6
SF3B2-204ENST00000525207 MB21D1Q8N884 522 aa11.31□□□□□ -0.6
SF3B2-204ENST00000525207 FSD1Q9BTV5 496 aa11.31□□□□□ -0.6
SF3B2-204ENST00000525207 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
SF3B2-204ENST00000525207 KANSL2Q9H9L4 492 aa11.31□□□□□ -0.6
SF3B2-204ENST00000525207 CWC22Q9HCG8 908 aaKnown RBP11.31□□□□□ -0.6
SF3B2-204ENST00000525207 PLXNA1Q9UIW2 1896 aa11.31□□□□□ -0.6
SF3B2-204ENST00000525207 SLC15A5A6NIM6 579 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 FLOT1O75955 427 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 HOXC6P09630 235 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 EEF2P13639 858 aaKnown RBP11.3□□□□□ -0.6
SF3B2-204ENST00000525207 PTPREP23469 700 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 TDO2P48775 406 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 ZMYM1Q5SVZ6 1142 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 WDR78Q5VTH9 848 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 ANKLE1Q8NAG6 615 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 SHCBP1Q8NEM2 672 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 DIS3LQ8TF46 1054 aaKnown RBP11.3□□□□□ -0.6
SF3B2-204ENST00000525207 ATG4CQ96DT6 458 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 MOV10L1Q9BXT6 1211 aaKnown RBP11.3□□□□□ -0.6
SF3B2-204ENST00000525207 SPATC1LQ9H0A9 340 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 IVNS1ABPQ9Y6Y0 642 aa11.3□□□□□ -0.6
SF3B2-204ENST00000525207 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
SF3B2-204ENST00000525207 H0YGN5 161 aa11.29□□□□□ -0.6
SF3B2-204ENST00000525207 TFRCP02786 760 aaKnown RBP11.29□□□□□ -0.6
SF3B2-204ENST00000525207 ATP2B2Q01814 1243 aa11.29□□□□□ -0.6
SF3B2-204ENST00000525207 CACNB2Q08289 660 aaPredicted RBP11.29□□□□□ -0.6
SF3B2-204ENST00000525207 AAMPQ13685 434 aa11.29□□□□□ -0.6
SF3B2-204ENST00000525207 HABP4Q5JVS0 413 aaKnown RBP11.29□□□□□ -0.6
SF3B2-204ENST00000525207 SEC62Q99442 399 aaKnown RBP11.29□□□□□ -0.6
SF3B2-204ENST00000525207 GOPCQ9HD26 462 aa11.29□□□□□ -0.6
SF3B2-204ENST00000525207 HOXC10Q9NYD6 342 aa11.29□□□□□ -0.6
SF3B2-204ENST00000525207 OGDHLQ9ULD0 1010 aa11.29□□□□□ -0.6
SF3B2-204ENST00000525207 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
SF3B2-204ENST00000525207 ZNFX1Q9P2E3 1918 aaKnown RBP11.29□□□□□ -0.6
SF3B2-204ENST00000525207 IGKV6D-41A0A0C4DH26 115 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 ERCC3P19447 782 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 ADORA2AP29274 412 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 MNX1P50219 401 aaPredicted RBP11.28□□□□□ -0.6
SF3B2-204ENST00000525207 PDE1AP54750 535 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 ANKRD45Q5TZF3 282 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 NECAB2Q7Z6G3 386 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms